Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03451 CTCCGACATGGATTTCATCTCCGACCTTCATTTCTCTCATCCATGCTTTTGTTCTCCTCATGTTAACGAAACACACAGAATTATGGGTATTTCACCATTAGAGGGTTTCCCTGCCCTTGATTGGGCGCAACAGTTGCCATATTCAAGCAATCGCCTTTGCTTGGAAGAGTTCCGCGATTTAGAAAACTTGACCCTTGATTTCAACCTCCCACCCCTTGGTGAAGATTTCGAGGAGCTGGTGGAACAAAAGCCCTCTAACATTGTCGTTCCCCTCTCCGCGATTGAAAATGGCTTTGCGATTGCGAGTGGTTGCGTGAAGAAAGAGCAAGTGCTGAATGTTGATGAGAGGCCAGTTCCAGTGCCTCTTGCTAGTGCCACTTCGATTTCGAAGAAGAGGTCAAGTGCGTTGGAATTTGAGGAAATAAAGAACCATTTTGATTTGCCCATAAATGAAGCTGCCAAGCAGATGAATGTTGGTTTAACCATGTTGAAGAGAAGGTGCAGGGAACTCAACATCATGAGGTGGCCCCACAGGAAAATCAAGAGCTTGCAATTACTCATCCACAATGTCAAGGAGTTGGGTTTGACAGACGAGGTTCCCATGTTGGAGAAGCATAAAATGATGCTGGAAAAATTACCAGGACTGGAGCTAAGCAAAGAAGCCAAGAAGCTGAGGCAAGCTTGCTTTAAAGCTAATTACAAGAGAAGGTGTATGGAACTCCGAGGTTGA 730 0.4534 MDFISDLHFSHPCFCSPHVNETHRIMGISPLEGFPALDWAQQLPYSSNRLCLEEFRDLENLTLDFNLPPLGEDFEELVEQKPSNIVVPLSAIENGFAIASGCVKKEQVLNVDERPVPVPLASATSISKKRSSALEFEEIKNHFDLPINEAAKQMNVGLTMLKRRCRELNIMRWPHRKIKSLQLLIHNVKELGLTDEVPMLEKHKMMLEKLPGLELSKEAKKLRQACFKANYKRRCMELRG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03451 240 ProSiteProfiles RWP-RK domain profile. 121 203 IPR003035 -
Pste2g03451 240 PANTHER PROTEIN RKD4 107 234 IPR044607 GO:0003700
Pste2g03451 240 Pfam RWP-RK domain 134 181 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03451 Pste-Chr2 35254279 35255278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03451 134 234 AtRKD Transcription Factor Family AT5G53040 63.366 8.89e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pste2g03451 RWP-RK 4.9e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03451 2 35254279 35255278 Pste2g03451 2 35254279 35255278 ECH