Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03443 AACAATCTGTCTCTCTCAATCTCATGTTCTCTCACACGCTCTGACAGACACCATCCCTTCTTTCTTTCACTCATCTCTGCATCATCAACCTTGGGATTCCCCAAACACATCAATCTCAAAACTGCCAACACATTATTAACCGGCTCCCTATGCAATTTAGCACCCACAGATATACGCGCCTTTATTCCGACCCTCGTAAAGTAACGTAACGTAACGTGTCGTGGGATGTTTTTGGTTGGTTGAATGAGACTTGAGATGGTAACAATTCACCTTTTGACGCATACGATATGATCATGGCCTGGGCTTAGAAGCAGATCCTTAATCTCCTCAACCATGGGGAAGAAAGGAGGGAGCTGGTTCTCCTCGGTCAAGAAAGTTTTCATGCCCTCTTCCAAGGACTCGCCGCTGCCCCACAACAAGTGCTACCACATAAAAGTTGAGCGACCAGTTTCTAAGGACCATCAACCATATACAAAAGACAACAAAGAAGAGCATTGGCAACATGAAGCGCCAGAGGAGGTGTCTGTGGAGCATTTTCCTGCTGAGAGTTCTCCAGATGTTACCAATGAAGGCAGTGGCACATCAACACCAGTGACTGAAGATAGGACTCATGCCATTGCCATTGCAACAGCAACTGCCGCCGCCGCCGAAGCGGCAGTGGCAGCTGCTCAAGCAGCCGCTAGAGTTGTGAGATTGGCAGGTTATGGACGCCAGTCCAAGGAAGAAAGAGCGGCAATACTCATTCAGTCATACTACAGAGGCTACCTTGCTCGACGTGCACTGCGTGCTTTGAAGGGATTGGTGAGGCTGCAAGCACTTGTGAGGGGACATAATGTGCGAAAGCAAGCCCAGATGACAATGCGATGCATGCATGCACTAGTCCGAGTACAGGCAAGAGTAAGAGCTCGCAGGCTCCAGTTGACTCAGGAGAAGCTTCAGAGAAGAATTGAGGAACAGGTCCATAGAGAACTAGAAGAACAACAACCTAAGTTGCTTTTGAGCCCCATCAAAATGTTAGACATGGATGGTTGGGACAGTAGGCGCCAAAGTATCCAGCAAATTAAGGAAAATGCTTTGAGGAAACACGAAGCTGCAATGAAAAGAGAACGAGCTCTTGCTTACGCTTTCAACTGCCAGCAACAACAGCAGAAGCAATACATGCACATAGACCCAAATGGTGATGATATCGGAAGCTATACCAATGAGGGTGAAAGAACCCAAATGGATTGGAACTGGTTGGAACGTTGGATGGCATCACAATCACACAACTTAAGCAACTTTGGGCCACGTGAGACTCTTTATAGGAGCGATGACATGTCTGAAGAAAAAACAGTTGAAATGGACATGGCTGCAACTCTGGACTCTACTCATGCTAACACGGGCCTTGTCAACCAAGAATCTTTTGACACAAGCCCAATCTATAATAGGTACCACCAGAGACATCACAGTGCTGGTGTACCTAGCTATATGGCCCCAACCCAATCTGCAAAGGCCAAAGTTCGGAGCCAAGGCCTGTTTAAGAAACGGGGTTCACCTGGGCCTCAGTGGAACCCATCCACCAGGACAAGTTCTGCAATTGAGTTGGGCTGTGACTCATCTAGTTCTGGTGGGGCCACTGCAGCTCATGTTTTCCCAAGGAGCCCAAGCCCAAAAATTAATGAGATTCGCCTCCAATCTAGACGAATTTCAGGTGCTAGCCCAGATAATGTTCACATTGAGGATTGGGCCCTTCACCTTGGAACCAATGGTTGGGCTTGACTTGATTAGTTTATTTATTTTTTTAAATATCATAATAATAATAATATTAATAATAGCATGTTTTGTATGGTCTGAACTCTTGAACTTTGGTCATTCACATGCATAGGGGTCCTTCATTTAATATATGCTGGTGTCGTGTCATGACCAACAATATCTGAGATTGTAATACTCCTTCCTCCTCAAACACACCCAAAAAGTGAGATTGTAATATCTAGGAACCTCATTTTATGTTCTGTTTCG 1998 0.4585 MGKKGGSWFSSVKKVFMPSSKDSPLPHNKCYHIKVERPVSKDHQPYTKDNKEEHWQHEAPEEVSVEHFPAESSPDVTNEGSGTSTPVTEDRTHAIAIATATAAAAEAAVAAAQAAARVVRLAGYGRQSKEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLQLTQEKLQRRIEEQVHRELEEQQPKLLLSPIKMLDMDGWDSRRQSIQQIKENALRKHEAAMKRERALAYAFNCQQQQQKQYMHIDPNGDDIGSYTNEGERTQMDWNWLERWMASQSHNLSNFGPRETLYRSDDMSEEKTVEMDMAATLDSTHANTGLVNQESFDTSPIYNRYHQRHHSAGVPSYMAPTQSAKAKVRSQGLFKKRGSPGPQWNPSTRTSSAIELGCDSSSSGGATAAHVFPRSPSPKINEIRLQSRRISGASPDNVHIEDWALHLGTNGWA 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03443 474 ProSiteProfiles IQ motif profile. 154 181 IPR000048 GO:0005515
Pste2g03443 474 ProSiteProfiles IQ motif profile. 130 158 IPR000048 GO:0005515
Pste2g03443 474 Pfam Protein of unknown function (DUF4005) 360 412 IPR025064 -
Pste2g03443 474 Gene3D - 130 173 - -
Pste2g03443 474 Pfam IQ calmodulin-binding motif 131 151 IPR000048 GO:0005515
Pste2g03443 474 Pfam IQ calmodulin-binding motif 157 172 IPR000048 GO:0005515
Pste2g03443 474 Coils Coil 191 216 - -
Pste2g03443 474 MobiDBLite consensus disorder prediction 17 87 - -
Pste2g03443 474 SMART iq_5 152 173 IPR000048 GO:0005515
Pste2g03443 474 SMART iq_5 129 151 IPR000048 GO:0005515
Pste2g03443 474 MobiDBLite consensus disorder prediction 27 65 - -
Pste2g03443 474 PANTHER IQ-DOMAIN 5-RELATED 1 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03443 Pste-Chr2 35106987 35111087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03443 1 445 IQD Protein Family AT3G49260 48.017 4.39e-92 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03443 2 35106987 35111087 Pste2g03443 2 35106987 35111087 ECH