Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03432 TACACATCACACATCACCACAACAGATCATTCTCTCTCTAAAAAAATAAAAACAATGACAATGGAGTATGGAAGGCTGGGACTGGGACCCTCTGAACCTGGAGGCTCCTCGCGCCTCACCGCTCCGAGATCTTCCGGAAAAAAGAAGATCATCGTGCTCTCGCTATTGAGCATCGTTTTAATAGCGGCCTCTGCGGTTACCGCAGTTGCTGTACGCGCTCACACTGCTAGTGCGAGTGGCAAAGCCCACGGGTCTGGGCTGGGTCGGCCCACGCAAGCCATTTCGCGCACCTGCAGTAAAACGAGGTTCCCCACGCTCTGCGTGAACTCGCTGCTGGACTTCCCCGGATCCACGGGGGCCTCCGAGAAGGATCTTGTTCACATTTCCTTCAACCTCACGCTGCAGCACTTCTCCAAGGCGCTCTACTCCTCCGCCGCCCTCTCCTACACCTCCATGGATCCCCGCGTCCGTGCCGCCTACGACGACTGCCTCGAGCTCCTCGACGACTCCGTCGACGCCCTCTCCCGCTCCCTCAACACCGTCTCCCTCGGCACCCTCGCCTCCTCCAACGACGACGTCCTCACCTGGCTCAGCGCCGCCCTCACCAACCAGGACACCTGCGCTGAGGGCTTCGCCGACGCCCCCGGCCCCGTCAAGGACCACATGGCCAACAACCTCAAGGACCTCTCCGAGCTAGTCAGCAACTGTCTCGCCATATTCTCCGGCGCCGCTGCCTCCGACGACTTCGCCGGCGTCCCCATCCAGAATCGGAGGCGCCTAATGGCAATGCCACACCATAATTTCCCCACATGGTTAGATAACCGCGATAGGAGATTGCTCAACTTGCCTCTCTCCGCGATACAAGCCGATATCGTCGTCTCCAAGGACGGTAACGGAACCGTTAAGACCATCGCTGAGGCCATTAAGAAGGTCCCCGAATATAGTTCACGTCGCATCATTATCTACGTCAGGGCAGGAAGATATGAAGAGGACAATTTAAAGTTGGGAAGGAAAAAAACAAATGTGATGTTCATGGGAGATGGGAAGGGCAAGACCGTCATTACAGGCGGAAAAAATTATATGGAGAACCTGACCACATTTCACACCGCTTCCTTCGCTGCTAGTGGTTCTGGTTTCATCGCAAAAGACATGACGTTCGAGAACTACGCCGGACCGGGTAAGCACCAGGCGGTGGCCCTACGTGTGGGAGCAGATCACGCGGTGGTGTACCGCTGCAACATCATCGGATACCAGGACACAATGTATGTCCACTCGAACCGTCAATTTTACCGAGAATGTGACATTTACGGAACCGTGGACTTCATATTCGGCAACGCTGCAGTGGTGTTCCAAAACTGCAGTATCTGGGCTCGCAAACCCATGCCCCAACAGAAGAACACCATCACGGCCCAAAACCGAAAAGACCCGAATCAAAACACGGGCATTTCGATCCACAATTGTAGGATCATGCCCACACAGGATCTAGAAGCATCCAAGGGTAGCTACCCCACTTATCTGGGTCGTCCCTGGAAACTTTACGCTAGAACGGTTTACATGCTGTCCTACATAGGGGATCACGTGCATCCACGTGGGTGGCTGGAGTGGAACACTTCCTCGTTTGCTTTAGATACATTGTACTATGGTGAATACATGAATTTTGGGCCGGGTGCGGCTCTGGGCCAACGGGTTAATTGGCTTGGCTATAGGGTCATCAATTCCACGGGGGAAGCGTCCACGTTCACGGTGGCCCAATTCATATCGGGCTCCTCCTGGTTACCGTCTACCGGAGTTTCATTCATTGCTGGATTATCAACCTGAGACCGTTTTTTTCCTGCACCCCAAAAATCTCATTCAACACATCTTTTTATTACCAAAAGATTAGTTCATACTTCATAAAGAAGATTTTACATTTCAGATTAAGTAGTGTAGGTTGAGATTATTGGTGATGCAGGAATAATCAATTCCCCTGCCGCTCTAGTCATCTTCCAAATTTCAACCTTGCTCCATTGTTTAAACCAACCAAATTTGCTAAGATAAATTTATAGATCTTTCATTCGTGACTGTACTAAACTACAGTATAGTTTTTTTTTTTTAACCCGATCGACGCCGACGATGATAATAAGGAAT 2127 0.5157 YTSHITTTDHSLSKKIKTMTMEYGRLGLGPSEPGGSSRLTAPRSSGKKKIIVLSLLSIVLIAASAVTAVAVRAHTASASGKAHGSGLGRPTQAISRTCSKTRFPTLCVNSLLDFPGSTGASEKDLVHISFNLTLQHFSKALYSSAALSYTSMDPRVRAAYDDCLELLDDSVDALSRSLNTVSLGTLASSNDDVLTWLSAALTNQDTCAEGFADAPGPVKDHMANNLKDLSELVSNCLAIFSGAAASDDFAGVPIQNRRRLMAMPHHNFPTWLDNRDRRLLNLPLSAIQADIVVSKDGNGTVKTIAEAIKKVPEYSSRRIIIYVRAGRYEEDNLKLGRKKTNVMFMGDGKGKTVITGGKNYMENLTTFHTASFAASGSGFIAKDMTFENYAGPGKHQAVALRVGADHAVVYRCNIIGYQDTMYVHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSIWARKPMPQQKNTITAQNRKDPNQNTGISIHNCRIMPTQDLEASKGSYPTYLGRPWKLYARTVYMLSYIGDHVHPRGWLEWNTSSFALDTLYYGEYMNFGPGAALGQRVNWLGYRVINSTGEASTFTVAQFISGSSWLPSTGVSFIAGLST 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03432 605 Gene3D - 284 603 IPR012334 -
Pste2g03432 605 NCBIfam pectinesterase inhibitor domain 79 241 IPR006501 GO:0004857
Pste2g03432 605 Gene3D Invertase/pectin methylesterase inhibitor family protein 91 242 IPR035513 -
Pste2g03432 605 Pfam Plant invertase/pectin methylesterase inhibitor 93 239 IPR006501 GO:0004857
Pste2g03432 605 CDD PMEI-like_3 98 245 - -
Pste2g03432 605 ProSitePatterns Pectinesterase signature 2. 435 444 IPR033131 -
Pste2g03432 605 FunFam Pectinesterase 90 243 - -
Pste2g03432 605 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 92 241 IPR035513 -
Pste2g03432 605 FunFam Pectinesterase 284 603 - -
Pste2g03432 605 Pfam Pectinesterase 290 588 IPR000070 GO:0030599|GO:0042545
Pste2g03432 605 PANTHER PECTINESTERASE 60 593 - -
Pste2g03432 605 SMART PMEI_2 89 239 IPR006501 GO:0004857
Pste2g03432 605 SUPERFAMILY Pectin lyase-like 285 602 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03432 Pste-Chr2 34835796 34839897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03432 20 604 Carbohydrate Esterase AT5G53370 65.593 0.0 801