Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03427 AGACCGGTCTTCTCTTCCCATATTTGCACAACATCTCTCAAGAACTTCATCAGCTTGAGGAGTACTGCAAAACCCACAAGTCCAATGCTTCAATGTGGAATTTGTCTTTTTGCGCCGCACTGAGGAGGGAGATTAAAGAGAGAAAAGCCTTTTATTCGCATTTCTTCTTTATAGTAAGAAAAAAGTGTAAAGGAACGGTTAAAGTTTATATCGTTTCTATAGCTGTTTTACATCTGTTAACTACCTTTTTTATTTATTTGCCCATGTCTTTAATGCAGGATGACTTTGTTCAGTCTTCTGCCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTATTCAAAGCTCCTGAACCTATTATTGAAGAGCCAATCATGGACCTGGATCCCATGACAGCGGCGGCCATCTCCATGATATCTTGTGGGGAAGATGTCTCCACAGAGGGATTAAAATCCTCTGATATTGATATTCTTCAAAATGATCAGCTTCTTAGTGAGGTATTTTATGAATGCAAAAAGGATCTCTTGGAAAAGGCAGCAATAGAGCTACCACTCTCTGAGATTCTGGAAATAAAGGTTCCTGTTCTTAACATTGATGAGAACTCAATCCATGAAAACAAGCCACTTCCTGACATTCAATTAGCAAAGAGTGTCAGCTCTGGAAGTTTGAGCTCAATGGACTGGATGCGTGGAGCTGCTATGAAGCCTGCTTTCATTGACATCCCAGCAATAGATTTCAATGCAGATTATGGCATTCGGAGATCATATAGTGAAGGAGATATAAAGACTCTGGGTAATGGTAACATGAACATCGTCCAATCACCCCGTGAGAGGTCCTTTCTTATCAACAACTGCACCAGTGAGGAACGCTTCCAAAAGCTCTCCAGATACAGGAACAAGAGGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCAGACAGTCAACCAAGAATCCGCGGAAGATTTGCAAGGACCGAGGAATCTGACGCCAAGAGGGAA 1019 0.419 MWNLSFCAALRREIKERKAFYSHFFFIVRKKCKGTVKVYIVSIAVLHLLTTFFIYLPMSLMQDDFVQSSAMSEYDLAAEGDLFKAPEPIIEEPIMDLDPMTAAAISMISCGEDVSTEGLKSSDIDILQNDQLLSEVFYECKKDLLEKAAIELPLSEILEIKVPVLNIDENSIHENKPLPDIQLAKSVSSGSLSSMDWMRGAAMKPAFIDIPAIDFNADYGIRRSYSEGDIKTLGNGNMNIVQSPRERSFLINNCTSEERFQKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFARTEESDAKRE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03427 309 Pfam CCT motif 259 301 IPR010402 GO:0005515
Pste2g03427 309 ProSiteProfiles CCT domain profile. 259 301 IPR010402 GO:0005515
Pste2g03427 309 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 185 302 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03427 Pste-Chr2 34663410 34671555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03427 255 305 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 5.97e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste2g03427 CCT 3.8e-16 CL0281