Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste2g03426 | ATTTGGTGAGCGAGTGCCCTCTGCTTGCCACATTGACTCAGCCATGGTCATAACAATTACTTACGTAAAAGCTTAAAACGAATAATGTTACACACGAAAACCCGGCCCAAGATGATGGTGAACCAGAATGCCATCACCAAGCTCACAATTGGGAAGAAGAATTTGCGCTACCAACACGCAACGCGCAGGTTTCCGACATTCTCGCACTCAATTCTTTAACTTTCTTTGACCCTCTTCGGGTGTCTCTCCACGAAATTCGGACTCGCCTCAAGCTTCTTTGGGTGCTCTGTTTCTTGGAATTCAATTCGGGATTAGGGTTTATGGCACAAACCATGATTATCAAGCGCAATTTGAAATCCCAAATGCCGAGTCTGAAACGAGTCAAACTCGGTGACTCGGTGGGCGAGGACGACGAGTGTTCTTATTCTCGCAAGAAGAGAAAGACCAACGGTTACTACCCTTTGAACCTCCTCGGCGATGTCGCTGCCGGCGTGATTCCGGTGAGTTTTCACGGGCTGCTCGGCGCCGGCTTGGCGGAGAAGGGGTTCTCTGCGACGTGGTGCACCAAAGTATCGTGCAACGGAGTGGAATCCGAGGCGAAAAACGACGTGGTGGTGGAAGTGAAGAAGAAGAACGAGGTTCAGCGGCCACCTCTGGTTAGGACTTCGAGGGGACGAGTTCAGGTTCTCCCTTCGCGGTTTAACGATTCGGTTATCGATAACTGGAGGAAGGAGAGCAAGACTAGCAGTGGCTTGCGTGATTGTGATTATGACGAAGAATTTGAATGCAAGAAGGAGAAGTTCAGCTTCAAGACACCCAAGGTTTGCAATAATCAGAAGAAAGGAAAGAACGAGGAGAAAACGGGTTCTAAAGTTCGTAAGTACTCGGCATTGTGTAAAGGTTTTGAGAGGAGCAAGTGTTCGAGTTTGCGTGGTGGTGGTGCATTGGCCATGAGACATGGTGGGGTGGTGGTTGAAGAAGACGAGAAGGGAAGGTTTTTGGAGGTGGAAGGGGTTGGTTTGATGAGTTTGAAGGAAAACAATGTAGAGAAGAGAAATGGGTGGTCTGGACCAGAAGATTTTTATGCAGGTGATATAGTGTGGGCCAAAGCTGGGAGAAAGGAACCTTTTTGGCCAGCCATTGTTATTGATCCTATGACTCAAGCACCCGAGTTAGTTCTCAGGTCTTGTGTAACTGATGCAGCTTGTGTCATGTTTCTTGGGTACGCGGGGAATGAGAATCAAAGGGACTATGCATGGGTGAAACATGGGATGATTTTTCCATTTGTGGATTATGTGGACAGGTTTCAGGGGCAGTCTGAGTTGAGTTGCTATAATCCTTCTGACTTCCAAATGGCAGTAGAGGAGGCATTTTTGGCGGAGAGGGGTTACACAGAGAAGTTGATAGCAGATATAAATACAGCAGCTTGTAACAATGGTTATGATGATTCTTTCTTGAAAGCCTTTGAGGAGGTCAGTAGCTCAAACCAATATTCAGGATATCATTTTCTGAACCAGGATTTATTTGATAAGAAAGAAACACGACCCTGTGAAGCCTGTGGGTTGAGCCTTCCTTACAAGATGTTTAAAAAAACAAAGGATTCAACTCCTGGTGGCCAATTCCTATGTAGAACATGTGCCAGATTAATAAAATCAAAGCATTACTGTGGCATATGCATGAAGGTTTCAAATCATTCAGACAGTGGAAGCTGGGTGCGCTGTGATGGATGCAAAGTGTGGGTGCATGCAGAATGTGACCAAATTTCTAGTAACCTTTTCAAGAATCTTGAAGGCACTGATTATTACTGCCCTACTTGCAAAGCCAAGTTTGATTTTGAGTTATCTGATTCAGAAAAATCACAGCCTAAAGTCAAGTGGAACAAAAACAATGGGCAGCTACTGCTTCCAAATAGAGTCACTGTTCTCTGCAATGGCATTGAAGGCATATATTTTCCAAGCCTTCATTCAGTTGTGTGCAAGTGTGGGTTTTGTGGGACAGAAAAGCAAGCACTTAGTGAATGGGAACGACACACAGGTTCCAAATTAAGAAATTGGAGAACAAGTATTAGGGTGAAAGACTCCATGCTACCTCTGGAACAATGGATGCTGCAGTTGGCTGAATTTCATGCTACTGCTCTAGTTCCTGCCAAACCTAAGAAACCTTCTCTAAAAGAAAGGAAGCAGAAGTTGCTCACCTTCTTGCAAGAGAAGTATGAACCTGTCTATGCTAAGTGGACTACAGAACGCTGTGCTGTTTGTAGATGGGTTGAAGACTGGGACTACAACAAAATTATCATTTGCAACAGATGTCAAATAGCAGTTCATCAGGAATGCTATGGAGCAAGAAATGTCCGAGATTTTACATCTTGGGTTTGTAAGGCTTGCGAAACACCTGACATCAAGCGGGAGTGTTGTCTTTGTCCTGTAAAGGGTGGTGCTCTAAAGCCGACTGATGTTGACACATTATGGGTTCATGTCACTTGTGCTTGGTTTCGACCCGAAGTCTCTTTTGCTAGCGATGAGAAGATGGAGCCTGCTTTGGGTATTCTAAGTATTCCATCAAATTCTTTTGTGAAGATTTGTGTTATTTGCAAGCAAATTCATGGTTCATGTACACAATGTTGCAAATGTTCCACATATTTTCATGCCATGTGTGCATCAAGAGCTGGTTATCGAATGGAGTTGCATTGTTTGGAGAAAAATGGCAGGCAGACAACAAAAATGGTCTCTTATTGTGCTTACCACAGGGCTCCCAATCCAGACACTGTTTTAATTATGCAAACCCCTCTTGGGGTCATTTCAACTAAAAGCCTTCTCCAAACTAAGAAAAAAACTGGTTCGAGGTTAATCTCATCGAGCAGAAGAAAGCAAGATGACCCTCCTGTTGATAACACTGAGCATGAGCCATTTTCTGCTGCTAGGTGTCGTATCTTCCAACGAACAAACCATACCAAAAAGAGAGCCGCAGATGAAGCCGTTTCCCATCAAGTGAGGGGTCACTATCATCATCCTTCAGATGCAATACAGAGTTTAAATAAACAAAGAGTGGTACATGAACCTCAGGCATTTTCTTCTTTCAGAGAACGCCTTTACCATTTGCAGAGAACCGAAAATGAACGTGTTTGCTTTGGTAGATCAGGCATACATGGATGGGGTCTCTTTGCACGTAGAAATATTCAAGAAGGAGAAATGGTTCTTGAATATCGTGGTGAACAAGTGAGACGCAGCATTGCAGATCTGAGGGAAGCGCGCTATAGATTAGAAGGGAAGGACTGCTATTTGTTTAAGATTAGTGAAGAAGTGGTGGTAGATGCCACTGATAAAGGGAATATAGCACGGCTGATTAATCATTCTTGTATGCCAAATTGCTATGCAAGGATCATGAGTGTCGGTGATGACGAGAGCCGAATTGTACTCATTGCTAAGACTAACGTATCTGCTGGTGATGAGTTAACGTATGACTACTTGTTTGATCCTGATGAGCCAGAGGAATTCAAAGTTCCATGCCTATGTAAAGCTCCAAACTGCCGGAAGTTCATGAATTAGGAAGGATTATACCAATGAAATGAACATCAGATGACAAGTATTGTTTCTTCTCCGCAAGGAGCACTAACCACATACCCTCTTCTTTTAGGGAATCTCACAGTTACACCAAAGTTGTAATTTTTATCAAACCAAAAGAAGACAAAAAAAAAAAAATAGGGTGAAAAAAAAAGGCATAGTTTAGTATTTTTCTTTTTACTCTTGGTTTTCTTTGGACATTCACCGAATTCTAATAAAAGCTAGATTTGGTAGCTTTTGGCTCTTGGCTTCTTTGTAAATGTATTTCCCCATATTACTCTTATTTTCCTCCAATTAATATAACCAATTTATTCGCTTCATGTACTTTTCCGATG | 3895 | 0.4303 | MAQTMIIKRNLKSQMPSLKRVKLGDSVGEDDECSYSRKKRKTNGYYPLNLLGDVAAGVIPVSFHGLLGAGLAEKGFSATWCTKVSCNGVESEAKNDVVVEVKKKNEVQRPPLVRTSRGRVQVLPSRFNDSVIDNWRKESKTSSGLRDCDYDEEFECKKEKFSFKTPKVCNNQKKGKNEEKTGSKVRKYSALCKGFERSKCSSLRGGGALAMRHGGVVVEEDEKGRFLEVEGVGLMSLKENNVEKRNGWSGPEDFYAGDIVWAKAGRKEPFWPAIVIDPMTQAPELVLRSCVTDAACVMFLGYAGNENQRDYAWVKHGMIFPFVDYVDRFQGQSELSCYNPSDFQMAVEEAFLAERGYTEKLIADINTAACNNGYDDSFLKAFEEVSSSNQYSGYHFLNQDLFDKKETRPCEACGLSLPYKMFKKTKDSTPGGQFLCRTCARLIKSKHYCGICMKVSNHSDSGSWVRCDGCKVWVHAECDQISSNLFKNLEGTDYYCPTCKAKFDFELSDSEKSQPKVKWNKNNGQLLLPNRVTVLCNGIEGIYFPSLHSVVCKCGFCGTEKQALSEWERHTGSKLRNWRTSIRVKDSMLPLEQWMLQLAEFHATALVPAKPKKPSLKERKQKLLTFLQEKYEPVYAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARNVRDFTSWVCKACETPDIKRECCLCPVKGGALKPTDVDTLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKICVICKQIHGSCTQCCKCSTYFHAMCASRAGYRMELHCLEKNGRQTTKMVSYCAYHRAPNPDTVLIMQTPLGVISTKSLLQTKKKTGSRLISSSRRKQDDPPVDNTEHEPFSAARCRIFQRTNHTKKRAADEAVSHQVRGHYHHPSDAIQSLNKQRVVHEPQAFSSFRERLYHLQRTENERVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLREARYRLEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGDDESRIVLIAKTNVSAGDELTYDYLFDPDEPEEFKVPCLCKAPNCRKFMN | 1074 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste2g03426 | 1074 | Pfam | PHD-finger | 655 | 689 | - | - | |
| Pste2g03426 | 1074 | ProSitePatterns | Zinc finger PHD-type signature. | 643 | 688 | IPR019786 | - | |
| Pste2g03426 | 1074 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 634 | 691 | IPR013083 | - | |
| Pste2g03426 | 1074 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 694 | 809 | IPR034732 | - | |
| Pste2g03426 | 1074 | MobiDBLite | consensus disorder prediction | 837 | 860 | - | - | |
| Pste2g03426 | 1074 | Gene3D | - | 250 | 359 | - | - | |
| Pste2g03426 | 1074 | ProSiteProfiles | Zinc finger PHD-type profile. | 640 | 691 | IPR019787 | - | |
| Pste2g03426 | 1074 | SMART | set_7 | 932 | 1055 | IPR001214 | GO:0005515 | |
| Pste2g03426 | 1074 | PANTHER | PHD FINGER PROTEINS | 96 | 523 | - | - | |
| Pste2g03426 | 1074 | FunFam | Histone-lysine N-methyltransferase | 692 | 811 | - | - | |
| Pste2g03426 | 1074 | CDD | PWWP_AtATX3-like | 255 | 359 | - | - | |
| Pste2g03426 | 1074 | Gene3D | SET domain | 828 | 1074 | IPR046341 | - | |
| Pste2g03426 | 1074 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 443 | 504 | IPR013083 | - | |
| Pste2g03426 | 1074 | MobiDBLite | consensus disorder prediction | 844 | 858 | - | - | |
| Pste2g03426 | 1074 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 1 | 1074 | IPR025780 | - | |
| Pste2g03426 | 1074 | SMART | PostSET_3 | 1058 | 1074 | IPR003616 | - | |
| Pste2g03426 | 1074 | Pfam | PHD-zinc-finger like domain | 696 | 808 | - | - | |
| Pste2g03426 | 1074 | ProSiteProfiles | PWWP domain profile. | 256 | 325 | IPR000313 | - | |
| Pste2g03426 | 1074 | CDD | SET_SETD1-like | 919 | 1070 | - | - | |
| Pste2g03426 | 1074 | SUPERFAMILY | FYVE/PHD zinc finger | 446 | 503 | IPR011011 | - | |
| Pste2g03426 | 1074 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 692 | 811 | IPR013083 | - | |
| Pste2g03426 | 1074 | CDD | PHD_ATX3_4_5_like | 642 | 688 | IPR042011 | - | |
| Pste2g03426 | 1074 | SUPERFAMILY | Tudor/PWWP/MBT | 248 | 361 | - | - | |
| Pste2g03426 | 1074 | ProSiteProfiles | SET domain profile. | 932 | 1049 | IPR001214 | GO:0005515 | |
| Pste2g03426 | 1074 | ProSiteProfiles | Zinc finger PHD-type profile. | 446 | 502 | IPR019787 | - | |
| Pste2g03426 | 1074 | Pfam | SET domain | 943 | 1048 | IPR001214 | GO:0005515 | |
| Pste2g03426 | 1074 | SUPERFAMILY | FYVE/PHD zinc finger | 641 | 705 | IPR011011 | - | |
| Pste2g03426 | 1074 | Coils | Coil | 1070 | 1074 | - | - | |
| Pste2g03426 | 1074 | SMART | PHD_3 | 448 | 500 | IPR001965 | - | |
| Pste2g03426 | 1074 | SMART | PHD_3 | 642 | 689 | IPR001965 | - | |
| Pste2g03426 | 1074 | SMART | PHD_3 | 753 | 809 | IPR001965 | - | |
| Pste2g03426 | 1074 | Pfam | PWWP domain | 257 | 351 | IPR000313 | - | |
| Pste2g03426 | 1074 | CDD | ePHD_ATX3_4_5_like | 697 | 808 | IPR041955 | - | |
| Pste2g03426 | 1074 | FunFam | Histone-lysine N-methyltransferase | 630 | 691 | - | - | |
| Pste2g03426 | 1074 | FunFam | Histone-lysine N-methyltransferase | 906 | 1074 | - | - | |
| Pste2g03426 | 1074 | CDD | PHD_TCF19_like | 449 | 499 | - | - | |
| Pste2g03426 | 1074 | Pfam | PHD-finger | 448 | 501 | IPR019787 | - | |
| Pste2g03426 | 1074 | SUPERFAMILY | SET domain | 922 | 1074 | IPR046341 | - | |
| Pste2g03426 | 1074 | ProSiteProfiles | Post-SET domain profile. | 1058 | 1074 | IPR003616 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste2g03426 | Pste-Chr2 | 34616859 | 34629950 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste2g03426 | 643 | 808 | C2H2 Transcription Factor Family | AT3G14740 | 32.948 | 2.02e-19 | 89.4 |
Transcription factors information