Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03423 GAAGAGGCAGTGATTGGGTTAAGTTAGTGAGAAGCGAGAAGTGAGAAGTGAGAAGCGTAGAGCGAGAAAGAGAATGTCGTCGACGTTGCTTGAAGTGACGCGGGCGTCACACGAGGAGGTTGAGCGGTTGGAGCGGCTGATAGTGAAGGAGCTCCAGAATGAGCCCACCTCCAACAAAGAACGTTTGTATCAGAGTCACCGTGTGCGAAACATGATCGACACCATTACCTCCACCACCGAAAAGCTTATTGGGATATATGAAGATAACGACAACGCCAGGAAGGACGAGATTGCTGCACTCGGAGGCCAAACTGCTACCGGAATTAACGTTTTCAGTGCCTTTTATGATAGACTCAAAGAGGGTTCTCAGACTAATTTGGCTTTTGTTACTGCTGTATGTCTAACGGATTGGTTGTTTTGTGGTATTCAGATTCGAGAGTATCATAGGAAGCACCCAGTTGCACGCGTTGTTGATGCCAATGACGATTATGAAGCACTTCTTAAAGAGGAACCTCAAATTGAGTTTAGTGGAGAGGAAGCTCTTGGTCGATACTTAGATTTGCATGAATTATATTATCAGTATGTCAATTCTAAGTTTGGAGAGTTTATCAATTCTAAGTCTGGAGAACGAGAGCGAATTGAGTATTCTGCATATGTTGATGTTTTCTCAGACACAGATAAGATTCCCCGCAAAATGAAAATGACGAGGCAGTACCGAGAATATATTGCAAATCTTTTGGAGTATCTGTTATACTTTTTCCAGCGGACAGAGCCCCTGCAAGATCTTGATCGGATTTTCTCTAAGGTGACAACTGAATTTGAAGAAAATTGGTCTGCTGGAAAGGTACAGGGATGGGAAAAAAAAGATCATCAGGAGAATGGACATGTACCTGCTGAGCATGCCATCATCGATCTTGATTATTATAGTACAGTTGAAGAGTTGATGGAAGTGGGTCCTGAAAGGTTAAAGGAGGCACTGGCTGCACTGGGGCTTAAGACTGGTGGTACTGTTCAGCAACGGGCAGAGAGGCTCTTCGTCACAAAGCACACACCTCTTGAAAAGTTAGACAGAAAGCATTTTGCTAAGGGGGCGCGGGGTGTAGAAAAGAATGGGGTTGCTGCAGTTCCACAAGAAGATGGAGATTCTAAAGAGATTGCATTGATGGAAGCCAAAATGAAAAAACTGTGTGATTTGTTAGAGGAGACAATTGCTCGAACAAAAGACAATGTTGTAAAGAAGCAAGCTCTGACGTACGAGGAAATGGAAGCAGAACGTGAGGAGGAAGAGACTCAAGAGGACACTGAAAGTGAAGATGAGGAGCAGCAAATATATAATCCCTTAAAATTACCCATGGGATGGGATGGGAAGCCTATACCTTATTGGCTGTATAAGCTACATGGTCTGGGTCAGGAATTCAAGTGTGAGATATGTGGGAACTACAGTTATTGGGGGCGTCGGGCTTTTGAACGACATTTTAAAGAATGGCGCCATCAACATGGAATGCGGTGTCTTGGTATACCAAATACTAAGAATTTCAATGAAATCACATCAATTGAGGAAGCAAAGGAACTTTGGAAGAAAATACAGCAAAGACAAGGAGTGAACAAGTGGCGCCCGGATTTAGAGGAAGAGTATGAAGACAAAGAAGGCAACATCTATAATAAGAAGACTTACACTGACTTACAGCGCCAGGGACTGATATGAAAAAACTCAATTTTGAAGATTCTTCTTTTCAAGTATTCTTTTCACCTGGTGTGCGTGTTTGAAGTGGAAGCGGAAATAGTTTTTTTCTACGTAGTTGATGGGGGAATGGTTGTATCTTATCATTATTGTGCACATTGCCAGGGAAAAGAATGGCGGATAAATAGGCCAATGAGCAATGCTTGTATTGTACTTTCTTTAGCAATTGTGAATTTATGATCGATACTGGGAAGAAATTATTGCCAATGATGTGTTGGATAGATTTCTAAATAGAGGATTGTTAGTAACACACTCCTCATAACACTTATT 2011 0.4217 MSSTLLEVTRASHEEVERLERLIVKELQNEPTSNKERLYQSHRVRNMIDTITSTTEKLIGIYEDNDNARKDEIAALGGQTATGINVFSAFYDRLKEGSQTNLAFVTAVCLTDWLFCGIQIREYHRKHPVARVVDANDDYEALLKEEPQIEFSGEEALGRYLDLHELYYQYVNSKFGEFINSKSGERERIEYSAYVDVFSDTDKIPRKMKMTRQYREYIANLLEYLLYFFQRTEPLQDLDRIFSKVTTEFEENWSAGKVQGWEKKDHQENGHVPAEHAIIDLDYYSTVEELMEVGPERLKEALAALGLKTGGTVQQRAERLFVTKHTPLEKLDRKHFAKGARGVEKNGVAAVPQEDGDSKEIALMEAKMKKLCDLLEETIARTKDNVVKKQALTYEEMEAEREEEETQEDTESEDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQQRQGVNKWRPDLEEEYEDKEGNIYNKKTYTDLQRQGLI 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03423 543 MobiDBLite consensus disorder prediction 397 416 - -
Pste2g03423 543 Pfam Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 150 209 IPR031774 -
Pste2g03423 543 Pfam Replication stress response SDE2 C-terminal 256 338 IPR025086 -
Pste2g03423 543 PANTHER SPLICING FACTOR SF3A-RELATED 261 346 - -
Pste2g03423 543 Pfam SF3a60/Prp9 C-terminal 424 543 IPR024598 GO:0000398|GO:0003723|GO:0005681
Pste2g03423 543 MobiDBLite consensus disorder prediction 396 417 - -
Pste2g03423 543 Coils Coil 387 414 - -
Pste2g03423 543 ProSiteProfiles Zinc finger matrin-type profile. 448 479 IPR000690 GO:0003676|GO:0005634|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03423 Pste-Chr2 34570411 34576904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03423 1 543 C2H2 Transcription Factor Family AT5G06160 69.982 0.0 737