Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03421 TAAGATATACTAGTGTATGGCATATAAGGAAGCAGCAGCAGCCGCCAAAAATGGGGAAAGTCAAGAAACAGAAAGATGAAAATGAAAATCCCGAATCCCATACTGACGCTATTGATGGTGTGTCCAATGACACTAGGAAGCATAGAAACATGTTTAGACGGCGTTTGCGAGCGGAAAGAAGCGGCGATCCGATTCCCGTTCCGCATAGAGGGAAAGCAGGAAAAGGCATGCGGATACCCAGGGTTCACAGTGCGGTGCAGCGAGAGCGGCCAAACACTGCTTAACCTGTCGGATTGGGGGGAGCTGAGAATAAAAAGAATAAACTACGCGGCGCAGCAAGTGTGGCTAAACGACCCGAATAAGTGCCTGGCGAAAAGGCTTCTGTCTCTGAAGCTCTCGGGGTCTCCCTTCGAGGCCGTTTACCGGCAGGAATTCTCCTTCTTCAACTGCTCGATGAAGTTGGAGTACCTTGTCCATCGCTACCGTCCAATAAGTTGTCTGAGCGAATCTCCAAAATACGCGGTGTTCGCGACGCCTTCTGCGAGCGTGTTTGGGCACTTGTGGTCGCTTTGTGATTTGGTTGGCAGAGTGAAGGTGCCGGTACAGTCGCCGTTTTACGATAGAGTGACGTCGTCGGAACTCAGCGAGGATATACGAGTGTCATGGTACAGCCCAGCCTGCGGGAGGTGCGAGTCACATGGTCATCGATGCGGCTTTAAGACCAACCATACCTTTGACCTCGATTGTTCCCCTCTCCCTTCCAAAGGGATTTCGGCAGGCGCACGGTACGCGATAGTGATGTGCATAGGGGTACCGGGTTTGTTGTGCTCGATGGGAGTGTTGAGTTGCATTTGCAACTGGTTCAGAATGGGAAGCCAGAATGGGGTTTGGGGTGATGAAATGGTGCCTGATTTCGAGTCTCTATCTCCCTCACCCCCCTCAACAGTGTGGGGACTGGACAGACCCACAATTGAATCATACCCTAAAATAGTTATTGATGAGAGCATAGGGTTACCCAAGAAGGGTGAGAAAACCTGCTCGATATGCCTGTCAGACTACATGCCCAAAGACACGCTTAAAAGCATCCCTGAATGTGGACACTGCTTTCATGCTCAATGCATCGACCAATGGCTTCCTCTCAATTCCTCCTGCCCAATTTGCCGAACTTCTCCTTCAAAGTTACCCCAACCCCGCGCACAATCATCATCCCCATAAACTCTGCTTCAACTTTTTACCTTACTTCCTCTTAAAGTATATCATATTCACGCTAAACCAAATCTACAAACACTCTTTTTTTCACATACATAATAAAGATGTAAATAGTCCATTGCAACAATACCTCTTCCATTTGGTGTGCCTAAAGATCTTGAATTTAACTCTTCAATGCCATTAAGCTCTTAGATGATGCTTTTGCTATTAATCATGTGCATTTTATCACAATTGACCATATCTATAGGTTTGAGTAAGAAAACTCTAAATGACACCTTCCCGTATGCTCCACGTGAAGTGAATTTGTTGGCAAGTTTGCTAAACTAGGATCTTCTACAAACTAGGACATCCAGTATTTTAATTTTGTTCCATATTTTCTTTCTATTGTCTTCCA 1603 0.4648 MKMKIPNPILTLLMVCPMTLGSIETCLDGVCERKEAAIRFPFRIEGKQEKACGYPGFTVRCSESGQTLLNLSDWGELRIKRINYAAQQVWLNDPNKCLAKRLLSLKLSGSPFEAVYRQEFSFFNCSMKLEYLVHRYRPISCLSESPKYAVFATPSASVFGHLWSLCDLVGRVKVPVQSPFYDRVTSSELSEDIRVSWYSPACGRCESHGHRCGFKTNHTFDLDCSPLPSKGISAGARYAIVMCIGVPGLLCSMGVLSCICNWFRMGSQNGVWGDEMVPDFESLSPSPPSTVWGLDRPTIESYPKIVIDESIGLPKKGEKTCSICLSDYMPKDTLKSIPECGHCFHAQCIDQWLPLNSSCPICRTSPSKLPQPRAQSSSP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03421 379 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 11 367 IPR046948 -
Pste2g03421 379 SUPERFAMILY RING/U-box 302 368 - -
Pste2g03421 379 CDD RING-H2_EL5-like 321 363 - -
Pste2g03421 379 Pfam Ring finger domain 320 363 IPR001841 -
Pste2g03421 379 ProSiteProfiles Zinc finger RING-type profile. 321 363 IPR001841 -
Pste2g03421 379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 289 368 IPR013083 -
Pste2g03421 379 SMART ring_2 321 362 IPR001841 -
Pste2g03421 379 Pfam Wall-associated receptor kinase galacturonan-binding 30 93 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03421 Pste-Chr2 34513193 34514862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03421 24 371 C3H Transcription Factor Family AT2G46495 32.861 1.30e-60 197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03421 2 34513193 34514862 Pste2g03421 2 34513193 34514862 ECH