Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03411 ATGCTTGCTAGTCATATGGTTGGGTCTTTTTGGTACTTGTTAGCTGTTGAACGCAATGACTTTTGCTGGCAAAAGGCTTGTATGGAAAATGGGTGCAATAAAAATTTCTTGTATTGTGGCAACCAATACATGGAAGGTTATAGTGCCTGGCAAAATAAAAGTAAAGATATTCTTATGCCACATTGCTCTGCAGATGATGATAATCCACCTTTTGACTATGGAATTTTCAAACAAGCCTTGTCATCTCGTATTGTTTCTTCTAGGAAGTTCATCTCCAAGTACTGTTACTGTTTATGGTGGGGGCTCCAGAATTTAAGTACTCTTGGCCAAGGGCTTGAAACTAGCACCTACACCGGGGAGGTTATCTTTTCGATAGCTCTAGCCATAGCTGGCCTTATTCTGTTTGCTCTTCTGATTGGTAACATGCAGATTATCTTGAAGTTCATTTATAGAACTGATGAACTATTCATCTTAGGAAAGGTCAGGTGGTTCTGCCTGAAAGTAGCTGGAGCGAATACACATTCACAACATATGCACACAGACTCTGAGGAGAGAGCTGTGGATGTTATTTGTACGTATCTTCAGTCTCTTACAATTAGACTTGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCATCGCTTGCTTCCACAAGATCTTAGAGAGCGTGTGAGACGATATGATCAATACAAGTGGTTGGCAACACGTGGTGTAGATGAAGAAAATTTGGTTCAGAGTTTGCCAAAGGATCTTCGAAGAGACATCAAGCGTCACCTTTGTCTGGCTCTAGTGAGAAGGGTTCCACTATTTGAGAGTATGGATGAGAGATTACTTGATGCCATATGTGAGAGACTGAAGCCATGTTTATTTACAGAAAGTACTTTCATTGTTCGCGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATACGTGGTCGCCTTGAGAGTGTTACTACAGATGGTGGGAGGAGTGGATTCTTTAATCGTGGTTTCTTAAAAGAGGCTGATTTCTGTGGGGAGGAGCTTTTGACCTGGGCACTGGATCCCAAATCTGGCTCTAACCTCCCATCTTCTACTCGAACAGTTAAAGCTTTAACAGAAGTTGAAGCTTTTGCCTTAACTGCTGAAGAGTTAAAGTTTGTCGCCAGCCAGTTTAGGCGCCTGCATAGTAGACAGGTTCAGCACACCTTTCGCTTTTACTCGCAACAATGGAGGACTTGGGCTGCATGCTTCATTCAAGCCGCATGGCGTCGATATTCCAAAAGAAAAGCTATGGAGCTTTTACGGAAGGAAGAACCTGAGGAGTCAGAAGGAACTCGGGGCAATGCCAGTGGCAGTTCATACAGCATTGGTGCCACCATCTTGGCCTCAAGATTTGCTGCAAATGCTCTTCGCGGTGTACATCGCAATCGGGAAGCCAAGAGTGCCAGGGAATTGGTAAAACTACAGAAGCCTCCAGAGCCTGACTTTACTGCTGATGATGCAGACTAAATTTTCATATGTAACTACTACTCTTCTTCTAAATGCATGTTTTCAAATTTTCATTTGCTATTCTGAACACACCTTTCTATGCAAGATTAAGAGGAAAATATTATACAATT 1613 0.4241 MLASHMVGSFWYLLAVERNDFCWQKACMENGCNKNFLYCGNQYMEGYSAWQNKSKDILMPHCSADDDNPPFDYGIFKQALSSRIVSSRKFISKYCYCLWWGLQNLSTLGQGLETSTYTGEVIFSIALAIAGLILFALLIGNMQIILKFIYRTDELFILGKVRWFCLKVAGANTHSQHMHTDSEERAVDVICTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLATRGVDEENLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTFIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRGFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALTEVEAFALTAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKAMELLRKEEPEESEGTRGNASGSSYSIGATILASRFAANALRGVHRNREAKSARELVKLQKPPEPDFTADDAD 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03411 500 Gene3D Jelly Rolls 271 391 IPR014710 -
Pste2g03411 500 ProSiteProfiles cAMP/cGMP binding motif profile. 273 403 IPR000595 -
Pste2g03411 500 FunFam Cyclic nucleotide-gated ion channel 1 271 389 - -
Pste2g03411 500 SMART cnmp_10 273 404 IPR000595 -
Pste2g03411 500 FunFam Cyclic nucleotide-gated ion channel 1 200 264 - -
Pste2g03411 500 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 494 - -
Pste2g03411 500 Pfam Ion transport protein 1 147 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste2g03411 500 Pfam Cyclic nucleotide-binding domain 296 384 IPR000595 -
Pste2g03411 500 CDD CAP_ED 273 404 IPR000595 -
Pste2g03411 500 Gene3D Helix hairpin bin 201 264 - -
Pste2g03411 500 Gene3D - 1 147 - -
Pste2g03411 500 SUPERFAMILY Voltage-gated potassium channels 10 236 - -
Pste2g03411 500 ProSiteProfiles IQ motif profile. 409 438 IPR000048 GO:0005515
Pste2g03411 500 MobiDBLite consensus disorder prediction 477 500 - -
Pste2g03411 500 SUPERFAMILY cAMP-binding domain-like 202 393 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03411 Pste-Chr2 34382091 34396264 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03411 1 497 Ion Channels AT5G57940 72.800 0.0 731