Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03406 CTCTTCCTTCCATCCTCAACACCAACTGTCTCTCTTCTCTCTTTATCCATCCTTGTCTACAACACCATCACTTCCTTCCCGCTTTCCGCGAACCTTCTTCTTCTTCTCCTTCTCTCTGTCACAATTTTCAATCCCTCTCCTGTTCATTTTTCACGCCACTTCCCACGACACTTACTCACGCTCTTTGCTTCGTTACTTCTCAACCTTTGACTTTCTTCTTCCTCTGAGTAGGCTGTCAGATTTTGAGATTCGTGAAGAAGCTATTTACTGTTCTGTGATGTTTACATCACACTGATTCATTGAATTCTTCCTTGCTTTTGAACTGGCCTAAAGTCATGAATTTTCAGCAAGACAAATTCGTTAGACATCTTGTTAAGCAGATGGTTAATCACGAACTGAGTTCTTTTCTTTATATGATGTTCAGATTTCAGGATTGGAGTTCAGACAAAGGTTCTGAGGCCAACTCCCCTGCAATTCGTGTAACACGATCAGGGAGAATTAGGAACACACTATATTCAGTTTCCGAGAAGTTTCAAAGGGGTTTGGAATCTAGTTCGGATGGGATAAAGAGATTCAGAAAGTCATTCAGATCTATTCCCTATAACAGAGTTCTTTCTAGAAGTTTTAGTTCTAGAAAGAAAATCCTTGATCCGCAGGGCCCTTTCCTTCAAAAGTGGAATAAGATATTTGTATTATCATGTCTTATTGCTGTGTCACTTGATCCTTTGTTCTTCTATGTTCCTGTGATTGATGATGACAAGAAATGTCTTTCAATGGACAGAAAAATGGAAATCACAGCAACTGTTTTAAGATCTTTCTCTGATATTTTTTATATAATCCATATAATTTTCCAATTTCGTACTGGATTCATTGCTCCCTCTTCTCGAGTATTTGGAAGAGGTGTTTTGGTTGAAGATGCTTGGGCAATAGCAATGCGATATCTATCATCATACTTCTTAATTGACATTCTTGCCGTTCTTCCCCTTCCACAGGTGGCAATTCTAATTATTATTCCAAAGTTGAGAGGCTCTAAATCACTGAATACGAAGACCTTGCTTAAATTTATTGTCTTCTTCCAATATATCCCACGGTTTTTACGAATAATTCCACTATATAAAGAAGTTACTAGGACCTCTGGCATTCTCACTGAAACAGCTTGGGCTGGAGCTGCATTCAATCTCTTTCTTTACATGCTAGCAAGTCATGTTATTGGTGCTTTTTGGTACTTGTTTTCTATTGAAAGAGAAACCACATGCTGGCAAAATGCATGTCGAAGAAACAGCACATGTAACACAGAAGCTATGTATTGTGATAATCACGAAGTGTTTGGCACAATTTCAGCATTCCTAAATGCTTCTTGCCCAATACAGAATCAAAATACAACACTCTTTAATTTTGGAATATTTCTAGATGCCCTTCAAGCTGGAGTTGTGGAGTCAAGAGATTTCCCACAAAAGTTCTTTTATTGTTTTTGGTGGGGCCTAAGAAATTTGAGGAACCAGTACTTGTGCTTGGACTCCAAGTCGAAAATGGTTTTGTCTTCAGTTTTGACTTTGTTTAATGCCTCAATTGTGAGTTCTCTTGGTCAAAACCTTGCAACAAGTACCTATGTTTGGGAAATCTGCTTTGCAATTTTCATTTCAATTGCTGGTTTGGTATTGTTTGCATTCCTCATTGGAAATATGCAGACATATTTGCAATCAACAACTACCAGATTGGAGGAAATGAGGGTAAAAAGGAGAGATGCAGAGCAGTGGATGTCTCATAGACTACTCCCTGACAGCCTGAGAGAAAGAATCAGGCGACATGAGCAATACAAATGGCAAGAAACCAGAGGTGTTGATGAAGACAGTTTGATTCGAGATCTTCCAAAGGATTTAAGAAGGGATATTAAGCGACATCTTTGCTTGGCTTTGCTGATGAGGGTCCCAATGTTTGAGAAAATGGATGAGCAACTTTTGGATGCAATGTGTGACCGACTGAAGCCGGTGCTGTACACAGAAGAAAGCTGCATTGTCCGGGAGGGAGATCCTGTTGATGAGATGCTCTTCATCATGCGCGGGAAGCTATTGACTGTGACCACTAATGGTGGAAGAACAGGGTTCTTTAACTCTGAATACCTCAAGGCTGGTGACTTTTGTGGAGAGGAGCTTCTGACGTGGGCTTTAGATCCTCACTCCTCATCCAACCTTCCCATATCAACCAGGACAGTCCAAACACTTTCGGAAGTGGAGGCATTTGCTCTGAAAGCAGATGACCTCAAGTTTGTGGCGTCACAATTTCGGCGCCTTCATAGTAAGCAGCTTCGCCACACTTTCAGGTTTTATTCGCAACAATGGCGTACATGGGCTGCGTGTTTCATACAAGCAGCCTGGAGGCGCTACAGTAAAAAGAAGCTGGAAGAGTCTCTGAGGGAAGAGGAGAATAGGCTGCAAGATGCTTTGGCCAAAGCAGGTGGCAGTTCACCTAGTCTTGGTGCCACAATATACGCTTCAAGATTTGCAGCTAATGCACTTAGACTTTTACGTAGAAATGGCACAAGAAAGACCAGGGTGCCAGAGAGAATATCACCCATGCTACTACAGAAGCCTGCTGAACCTGATTTTACTTCTGAAGAGCAATAG 2624 0.4112 MNFQQDKFVRHLVKQMVNHELSSFLYMMFRFQDWSSDKGSEANSPAIRVTRSGRIRNTLYSVSEKFQRGLESSSDGIKRFRKSFRSIPYNRVLSRSFSSRKKILDPQGPFLQKWNKIFVLSCLIAVSLDPLFFYVPVIDDDKKCLSMDRKMEITATVLRSFSDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDAWAIAMRYLSSYFLIDILAVLPLPQVAILIIIPKLRGSKSLNTKTLLKFIVFFQYIPRFLRIIPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVIGAFWYLFSIERETTCWQNACRRNSTCNTEAMYCDNHEVFGTISAFLNASCPIQNQNTTLFNFGIFLDALQAGVVESRDFPQKFFYCFWWGLRNLRNQYLCLDSKSKMVLSSVLTLFNASIVSSLGQNLATSTYVWEICFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRHEQYKWQETRGVDEDSLIRDLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALAKAGGSSPSLGATIYASRFAANALRLLRRNGTRKTRVPERISPMLLQKPAEPDFTSEEQ 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03406 762 Gene3D Helix hairpin bin 459 524 - -
Pste2g03406 762 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 84 757 - -
Pste2g03406 762 SUPERFAMILY Voltage-gated potassium channels 105 455 - -
Pste2g03406 762 Gene3D Jelly Rolls 531 651 IPR014710 -
Pste2g03406 762 Pfam Ion transport protein 114 460 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste2g03406 762 Coils Coil 685 705 - -
Pste2g03406 762 Gene3D - 117 457 - -
Pste2g03406 762 FunFam Cyclic nucleotide-gated ion channel 1 460 524 - -
Pste2g03406 762 ProSiteProfiles cAMP/cGMP binding motif profile. 533 617 IPR000595 -
Pste2g03406 762 FunFam Cyclic nucleotide-gated ion channel 1 531 649 - -
Pste2g03406 762 Pfam Cyclic nucleotide-binding domain 554 644 IPR000595 -
Pste2g03406 762 SMART cnmp_10 533 664 IPR000595 -
Pste2g03406 762 CDD CAP_ED 533 664 IPR000595 -
Pste2g03406 762 SUPERFAMILY cAMP-binding domain-like 462 655 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03406 Pste-Chr2 34310069 34318331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03406 1 761 Ion Channels AT5G53130 74.902 0.0 1141