Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03391 CGCCTCTCTCTGGATTCATTAGCTTCTCGCTGATCATAGGATCTTGGCATTGAAAATTTGCTATTTCTTTCTAAAAGCGTAGGTAACCTGGAATGGGAGTTGTCACTGTTTCTAGCTCAGCTGCTCGGACTCCTCTAGGATTGAATACTAAGTTTTCTACTTCTACCCATCGGCTTGCTCCCAAGAGGCCTTTAATTGTAGCATTTAAAGGAGATAAACACAATGACTCAGCTCTGCTTGCAACTCAAGAGAAAACCCCTGTTCCCGTTGAAACCAACAAGACACAGAAGAAAAATATAGGGAAACTTAACAAACTATCTAAGAGAGAAAGAGCTGTCTATGCAGAGGAAAGTTCTCCCTCTTCCATGGATGTTGACTACAATGAAGCAGCTGCCATGCTTGAAAATATATACAAACTCAGCCCTGGTAATGCAGATTGTGTAGATGGTAAAATCAAAAGAGTCTTGCGGAGACGGAAGAAGGCTGTTGATGAAACTAAACAAAAGGAGTTAAACGGTGATAGGGTGGTTAGAAGTCAGAACAAAAAAGATAAACGATTGAATCTTGATCAGAGAATTTCGCTAAAGAACAAAAGTGGGGACCTAGTCCTTCCAACTCGAAAGAAAAGAAATATTAGGAGCAGAATTGAGAAGATTGAAGAACTTATTAGGGAATATTCACTATCAACTGATTTTGTCAGTATGGACTGGAAGAAAATGAGAATACCTCCTGTTCTTTCTTCTTCAGAACATGCTTGGTTGTTCAAATTGATGCAACCTATGAAGGCATTGCTTCGAGTGAAAGAAGATTTTCACAAGGAGCTAGCAAGAGAACCTGCAGATGGTGAACTAGCTGATGGAACTAACATAACCATTGCTCAAGTAAAGAAAGCAATGGAGGTTGGTCAAGCAGCAAGAAACAAACTCATAAAGCACAATCTCCGGCTTGTCTTGTTTGTGATCAACAAATATTTTACAGATTTTGCAAGTGGCTCAAGATTTCAAGATCTTTGTCAGGCAGGAGTTAAGGGACTTATAACAGCAATCGATCGCTTTGAGCCTAACCGGAGATTTCGGCTATCAACATATAGTTTGTTTTGGATAAGACATGCCATCATTCGTTCGATGACCCTCTCAAGCTTCACACGTGTTCCCTTTGGACTTGAATCAGTTAGAGCAGAGATCCAAAAAGCTAAAACGGAGTTAACATTTGAGCTCCAGAGGCCGCCGACAGAGGAAGAAATAATAAAAAGAGTTAATATATCCCCTGAAAGATACCATGATGTAATCAAGGCATCAAAATCCATTCTTTCACTCAACTCTAGACATACAACCACACAAGAGGAATTCATTAATGGGATTGTTGATGATGATAGTGTTAATGGTGATAATAGGAAGCAGCCTGCTCTACTAAGGCTTGCTCTTGATGATGTGCTTGATTCCCTGAAGCCGAAGGAGGGCCTGGTGATCAGACAGAGATTTGGACTTGATGGCAAGGGTGACAGAACGTTGGGAGAAATTGCTGGCAACTTGAATATATCTAGGGAAATGGTAAGAAAGCACGAAGTCAAGGCTCTAATGAAGCTCAAACATTCAGCTCGATTGGATTATCTTCGTCGTTATGTTGTATAGATGTCTAATGTATAGACACACTTTACCTTGTTATATACTGATGATTTGTATTGGTCATTTAAATACCCACATTCATAATCATGCTCATGTAATTTGTATATGATGCACTTAAAATTGCACAAAGTATATGATTAAATAACTACTTATACATGTTATATACATATGATTTGTCTT 1805 0.3911 MGVVTVSSSAARTPLGLNTKFSTSTHRLAPKRPLIVAFKGDKHNDSALLATQEKTPVPVETNKTQKKNIGKLNKLSKRERAVYAEESSPSSMDVDYNEAAAMLENIYKLSPGNADCVDGKIKRVLRRRKKAVDETKQKELNGDRVVRSQNKKDKRLNLDQRISLKNKSGDLVLPTRKKRNIRSRIEKIEELIREYSLSTDFVSMDWKKMRIPPVLSSSEHAWLFKLMQPMKALLRVKEDFHKELAREPADGELADGTNITIAQVKKAMEVGQAARNKLIKHNLRLVLFVINKYFTDFASGSRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSSFTRVPFGLESVRAEIQKAKTELTFELQRPPTEEEIIKRVNISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVDDDSVNGDNRKQPALLRLALDDVLDSLKPKEGLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHSARLDYLRRYVV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03391 512 Coils Coil 178 198 - -
Pste2g03391 512 Pfam Sigma-70 region 2 278 344 IPR007627 GO:0003700|GO:0006352|GO:0006355
Pste2g03391 512 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 353 425 IPR013324 -
Pste2g03391 512 Gene3D - 351 403 IPR036388 -
Pste2g03391 512 SUPERFAMILY Sigma2 domain of RNA polymerase sigma factors 196 345 IPR013325 GO:0003700|GO:0006352|GO:0006355
Pste2g03391 512 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 417 505 IPR013324 -
Pste2g03391 512 Coils Coil 357 377 - -
Pste2g03391 512 Pfam Sigma-70, region 4 447 500 IPR007630 GO:0003700|GO:0006352|GO:0006355
Pste2g03391 512 NCBIfam sigma-70 family RNA polymerase sigma factor 274 500 IPR014284 GO:0003700|GO:0006352|GO:0006355
Pste2g03391 512 PANTHER RNA POLYMERASE SIGMA FACTOR RPO 88 511 - -
Pste2g03391 512 Gene3D - 435 512 IPR036388 -
Pste2g03391 512 Pfam Sigma-70 region 3 363 431 IPR007624 GO:0003700|GO:0006352|GO:0006355
Pste2g03391 512 Gene3D RNA Polymerase Primary Sigma Factor 39 349 - -
Pste2g03391 512 PRINTS Major sigma-70 factor signature 329 337 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste2g03391 512 PRINTS Major sigma-70 factor signature 305 318 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste2g03391 512 PRINTS Major sigma-70 factor signature 451 463 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste2g03391 512 PRINTS Major sigma-70 factor signature 487 498 IPR000943 GO:0003700|GO:0006352|GO:0006355
Pste2g03391 512 PRINTS Major sigma-70 factor signature 472 487 IPR000943 GO:0003700|GO:0006352|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03391 Pste-Chr2 33978362 33981822 Dispersed/Wgd