Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03378 GACTCCAGGAGTTCAACGACTTTAAGGCACCTGGCATCATGAATGATGCTGAAGTGATTAAAGATATTGTCGATCGTGTGCTGAAGAAATTGGTCAAACCCTCAATTAATTCAAAAGAACTTGTTGGAATTGATGAAAAAGTTGCAGAGGTAGAATCATGGATAAGAAAAGAGTCCAAAAACACCTGTCTTATTGGAATTTGTGGTATGGGCGGTATTGGCAAAACAACTCTTGCAGAAGAAGTATTTAATAAGCTACAATCTGAATATGAAGGTTCTTATTTTTTAGCTGGTGAAAGAGACCAATCAATCAGACATGAATTGACTTCTTTGAGAGAAATTTTGTTTTCTAAACTATTAGGATATGATGTTACTGAGGCCATAAGAAGCATACGAATTCAGTTGGCAACAATTAAGGAGCAAAAGTTAATGCCTCACGTATTTGCTAAGATGAGCAAACTAAGATTTCTAGAAATTTCTGGGAATGATGATTATGGTTGCTATGATAAACTTATTCTTGCTGCTGATGAGATTCAATTTTTGAGAAATGAACTAAGATTTCTCTGCTGGTATAATTATCCACTTAAATCGTTGCCAGAGAATTTTTCTGGCCAAAAGCTTGTAATACTGAAATTGAGAGGCAGCATCATTGAAAAACTTTGGGATGGAGTGAAGAACCTAGGGAATTTAAAAGAGGTTGACCTTAGTTGGTCCAAGATGTTAAAGGAGCTGCCAGATTTATCAAAAGCCACAAATCTTGAAGTACTGATTCTCGAGGGTTGTTCTATGTTGGCTAGTGTGAATCCATCTATTTTCTCTTTGAGAAAACTTGAGAAATTGGACCTTCGACATTGCAGGTTGCTTACCATGCTCACCAGTGATTCCCATTTATGCAGCCTTAGTTATCTCAAACTCGATGGTTGCGAGAATCTTAGGAAATTCTCAATTAAATCAGAGAATATGAAAGAGCTAACATTAGGATGGACCAAGGTTAAAGCACTTACTTCATCATTTGGATATCAAAGAAAGCTTCAATTGCTACATCTAAAAGGAAGTGCCATTGAGAGTTTACCTTCATCCATCAACAATCTTACGCAACTGCTACATCTAGATGTGAGCTTTTGTAGGGAGCTTCAAACAATATCAGAGCTTCCCTTGCTCCTTCAAACTCTAGATGCCCAATATTGCACATCACTTCAAACTCTACCAAAGCTTCCTCAGTTCCTTGAAACATTAAACCTCAAAGACTGCAAATCACTTATGAGTCTGCCAGAGCTTTCCCTGTCCCTTAAAACATTAAATGCCCAAATCTGCACTTCACTTCAAATTCTACCAGAACTTCCTCAGTTCCTTAAAACTCTAGATGTCTATCACTCTGTATCACTTAAGACTCTACCAGAGCTTCCCCCACTCCTTGAAATTCTAAATGTTGAAGGCTGCAGATTACTTCAGACGCTACCAAAGCTTCCCTCGTGCCTCAAAATTCTACATGCCCCATTCTGCTCCTTGGTTCAAACTTTACCAGATCTTCCTCCGTCCCTTGAAACTCTAAATGCTACTAGATGCCAATCATTGAAGACTGCATTGTTGTTTCCTTCCACAGCCATTGAACAGTTAAAGGAAAACAGGAGAAGTGTTTTGTTCCGGAATTGCTTGAACTTGGATGAACATTCTCTAGTTTCTATTGGGTTGAACGCACAAATCAATATGATGAATTTTGCAAACCACCACCTATGTACACCAAATCTCCACCATGTTCAAAATTACAATGATTACGATGTTAATCATCATTCTTATCAAGTTGTTTACTTGTATCCGGGAAGCACTATTCCAAAGTGGTTGGAGTATAAGACCACAAAGGATTATATAATTATTGATCTCTCTTATGCTACACCTTCACCTCAGTGGGGCTTCATTTTCTGCTTCGTCCTTCATAAGCACAAAGACAAAACTCTAATTGAAAGACTTGAATTTAACATCACCATAAGCGATGGTGAGGGTGAGGGTGAAGGTAAACAAGACAGTGTTCATATGTACGTATATTATATTGGTTACCAAACTGACACAGATCACTTGTGTGTGGCGTACGACCAAAGATGTTCTGCCTTCCTAAGTAGCAGAGCCAAACACCAAAAATATTTCAAACTCACAGTTACAATGGGGGCTCGAATCAACGGAGTAAGTTACAATGTACTGGCAAAAGAGGTTTTAAAAGGTTTTGGGGTCAGCCCAGTAAGCACCTTTGCGTACAACAGTTTCATTCAAAAAATGAAATTCAGAGACTCAGAGTATCAATTTCATTAAACAAATGGAATCATGTTGTGCTTCTCACATCATCCAAGGTATTTCTGTCCTGTGGTTTACGATAAAATCTTTGATTTAAAGAGTACAAAATTAATTTTTTCAGGAATTCACCCCTAATAGTATTAGTTTTCTATGTTTTGTATGCAATTTATTTAAAAAAAAACACCCAAGAAATACTGCATCCTATGTTCCTATATGAAGAGTTAACACATATTTTCTCAGCTCCAACTATATAGCTTGGTGGACAAGCTGAAATGTTTTCTTTCATTCTTTCTTAATTTAAGGATTTGCATTATAATGCAACTTGTAACTAGCTAGAATTTGTTGAGACAAACATATAGTTTGTAAGGAATCTGGTTATTCTATTTATTTAGGAAAAAGTTAAAAAA 2692 0.3685 MNDAEVIKDIVDRVLKKLVKPSINSKELVGIDEKVAEVESWIRKESKNTCLIGICGMGGIGKTTLAEEVFNKLQSEYEGSYFLAGERDQSIRHELTSLREILFSKLLGYDVTEAIRSIRIQLATIKEQKLMPHVFAKMSKLRFLEISGNDDYGCYDKLILAADEIQFLRNELRFLCWYNYPLKSLPENFSGQKLVILKLRGSIIEKLWDGVKNLGNLKEVDLSWSKMLKELPDLSKATNLEVLILEGCSMLASVNPSIFSLRKLEKLDLRHCRLLTMLTSDSHLCSLSYLKLDGCENLRKFSIKSENMKELTLGWTKVKALTSSFGYQRKLQLLHLKGSAIESLPSSINNLTQLLHLDVSFCRELQTISELPLLLQTLDAQYCTSLQTLPKLPQFLETLNLKDCKSLMSLPELSLSLKTLNAQICTSLQILPELPQFLKTLDVYHSVSLKTLPELPPLLEILNVEGCRLLQTLPKLPSCLKILHAPFCSLVQTLPDLPPSLETLNATRCQSLKTALLFPSTAIEQLKENRRSVLFRNCLNLDEHSLVSIGLNAQINMMNFANHHLCTPNLHHVQNYNDYDVNHHSYQVVYLYPGSTIPKWLEYKTTKDYIIIDLSYATPSPQWGFIFCFVLHKHKDKTLIERLEFNITISDGEGEGEGKQDSVHMYVYYIGYQTDTDHLCVAYDQRCSAFLSSRAKHQKYFKLTVTMGARINGVSYNVLAKEVLKGFGVSPVSTFAYNSFIQKMKFRDSEYQFH 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03378 754 Pfam Leucine Rich Repeat 193 212 IPR011713 -
Pste2g03378 754 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 119 IPR044974 GO:0006952
Pste2g03378 754 Gene3D Ribonuclease Inhibitor 368 549 IPR032675 -
Pste2g03378 754 Gene3D Ribonuclease Inhibitor 155 367 IPR032675 -
Pste2g03378 754 Pfam NB-ARC domain 33 81 IPR002182 GO:0043531
Pste2g03378 754 Gene3D - 5 131 IPR027417 -
Pste2g03378 754 PRINTS Disease resistance protein signature 51 66 - -
Pste2g03378 754 PRINTS Disease resistance protein signature 368 382 - -
Pste2g03378 754 PRINTS Disease resistance protein signature 496 512 - -
Pste2g03378 754 SUPERFAMILY L domain-like 126 475 - -
Pste2g03378 754 SMART LRR_bac_2 456 476 - -
Pste2g03378 754 SMART LRR_bac_2 393 413 - -
Pste2g03378 754 SMART LRR_bac_2 414 434 - -
Pste2g03378 754 SMART LRR_bac_2 435 455 - -
Pste2g03378 754 SMART LRR_bac_2 372 392 - -
Pste2g03378 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 116 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03378 Pste-Chr2 33842229 33847675 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03378 2 78 WRKY Transcription Factor Family AT4G12020 41.558 1.16e-07 53.9