Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03376 ACCTATCTTGTGGGTCTACGTATTCAGACTTTAAAGTCAGAAATTCAATATATTTCTTTGTTCCTTGCTGTTTATTTTTTGGTTTCATTTTTGTTTATCTCTGAAGGGTTTAGAGACAAGAATCCTCCTAATAAAAGATTGAAGCGTTCAGAGAAAAATCCATTGTGGGACAACAACGTTAACGCTCCTCCTCAAATAAAATACGATGTTTTCGTCAACTTCAGGGGCACCGACATCCGTAGTGGACTTCTTAGCCATTTGATTGAGGCTTTTAAAAGAAACCAAATAAATGCCTTTGTCGACGATAAACTTGAGAGGGGAGAAGAAATATGGCCATCACTTGTTGAAGCAATTGAACGATCACAAATTTCATTGATCATATTTTCAGAAGACTATGCATCTTCTCATTGGTGTTTAGAAGAACTTGTGACCATACTTGAATGCAGAAAGAAATATGGACAGGTTGTATTTCCTATTTTCTACCATGTAGAACCCAGAGATGTAGGAAAACAATCCTTGGAGAAATACAAAAAGGCATTTGCTGAGCATGAAACGAAATACGAGACCAAGGTGCAAACATGGAGACATGCTTTGAAAAAATCTGCTAAATTTTCTGGGATTGTGACATCAAATCTACTGGCAAAGTTGCCTAAACCGTTGGATAATTCAAAAAGACTTGTTGGAATTGATGACAAAATTGCAGATGTTGAAGCACTGATACACAGAGAGTCAAATAACACTCGTCTTATTGGAATTTGGGGTATGGGTGGTCTTGGTAAGACAACCCTTGCGGAAGAACTATTTATCAAATTACAACCTAAGTATGAAGTGGCTTTTAAGCTGGGAAGACTGAAAGATAAAGCTCTTATAACTTTATCCAATGATAACATTGTATCTATGCATGATATCTTACAAGAAATGGCTTGCGAGATTGTTCGTCAAGAGTCTAATGAAGATCCTGATAGACGTAGTCGATTGTGGGATCCCGATGACATTAATGAAGCATTGAAGAATGACAAGGTTATAGAGGCCATTAGGAGCTTACGAATTCAGTTGCCAACAATGAAGGAGCAAAATCATGGTTGTTACGATCAACTTATTCTTGCTGCTGAAGGGCTTCAATTTTTTGCAATTGAACTACGATTTCTCTGTTGGGAAAATTACCCTCTTAAATACTTGCCAGAGAATTTTTCTGGGGAAAAACTAAATTTGATGAATTTAAAAGTGGTCGACCTCAGTAGCTCGAAGATGTTAAAGGAGATGCCAGATTTATCACAAGCAATAAACCTTGAAGTATTAGATCTTAGCAATTGTTCTAAGTTGACCATTGTGCATCCATCCATTTTCTCTCTGACAAAACTTGAGAAATTGGACCTTGGCAACTGCAAGTCCCTTACCATACTCATAAGCGATTCGCATTCATGCAACCTCAGTTATCTCAACCTTGGGGGTTGCAAGAATCTTAGGGATTTTTCATTAATATCAAAGAATTTGAAAAAACTGAGATTAAATTATACAAAGGTCAAAGCACTTCCTTCATCATTTGGAAATCAAAGCAAGCTTAAATCACTACATCTTACAGGAAGTTCAATTCAGAGGTTACCTTTATTCTTCAACAATCTCACTCAACTGCAACATCTAGACCTAAGTAATTGCAACAAGCTACAAACAATACCAAAGCTTCCCCAATCACTTACAACTCTAAATGCTAATCTTTGTGGATCACTCCAGAGTCTGCTGGAGCTTCCTCCATTCCTAAAAACTCTAGATGTCACCCACTGTGAATCACTTCAGAGTCTACTAGATCTTCCTCCTTCCCTTATAACACTAGATGTCAGTTTTTGTAAATCACTTCAGAGTCTACCAGAGCTTCCCCTATCACTTAAAACTCTATTTGCTAGTTGTTGTAGATCACTTCAAACTTTGCCAGAGCTTCCCACTTCCCTTAAAACTCTAGATGTCACTCGTTGTGAATCACTTCAAAGCCTACCGGTGCTTCCCCATTTCTTTAAAATTCTAGATGTTATTTGTTGTGAATCACTTCAAACTCTACCAGAATTTCCCCTCTCACTTAAAACTTTACATGCCACAGAGTGCAAATCACTTCAGAGTCTACCAGCACTCCCCCTAACACTTGAAAGTCTTGATGTCAGTTATTGTGAATCATTGAAGACTCTACCAATGCTTCCCCCGTCACTTGAAACTCTAGATGCCATACTG 2220 0.3779 TYLVGLRIQTLKSEIQYISLFLAVYFLVSFLFISEGFRDKNPPNKRLKRSEKNPLWDNNVNAPPQIKYDVFVNFRGTDIRSGLLSHLIEAFKRNQINAFVDDKLERGEEIWPSLVEAIERSQISLIIFSEDYASSHWCLEELVTILECRKKYGQVVFPIFYHVEPRDVGKQSLEKYKKAFAEHETKYETKVQTWRHALKKSAKFSGIVTSNLLAKLPKPLDNSKRLVGIDDKIADVEALIHRESNNTRLIGIWGMGGLGKTTLAEELFIKLQPKYEVAFKLGRLKDKALITLSNDNIVSMHDILQEMACEIVRQESNEDPDRRSRLWDPDDINEALKNDKVIEAIRSLRIQLPTMKEQNHGCYDQLILAAEGLQFFAIELRFLCWENYPLKYLPENFSGEKLNLMNLKVVDLSSSKMLKEMPDLSQAINLEVLDLSNCSKLTIVHPSIFSLTKLEKLDLGNCKSLTILISDSHSCNLSYLNLGGCKNLRDFSLISKNLKKLRLNYTKVKALPSSFGNQSKLKSLHLTGSSIQRLPLFFNNLTQLQHLDLSNCNKLQTIPKLPQSLTTLNANLCGSLQSLLELPPFLKTLDVTHCESLQSLLDLPPSLITLDVSFCKSLQSLPELPLSLKTLFASCCRSLQTLPELPTSLKTLDVTRCESLQSLPVLPHFFKILDVICCESLQTLPEFPLSLKTLHATECKSLQSLPALPLTLESLDVSYCESLKTLPMLPPSLETLDAIL 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03376 740 SMART till_3 67 204 IPR000157 GO:0007165
Pste2g03376 740 SUPERFAMILY Toll/Interleukin receptor TIR domain 64 206 IPR035897 -
Pste2g03376 740 SUPERFAMILY L domain-like 371 682 - -
Pste2g03376 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 312 IPR027417 -
Pste2g03376 740 FunFam Disease resistance protein (TIR-NBS-LRR class) 64 215 - -
Pste2g03376 740 Gene3D Ribonuclease Inhibitor 672 740 IPR032675 -
Pste2g03376 740 Gene3D Ribonuclease Inhibitor 496 671 IPR032675 -
Pste2g03376 740 Gene3D Ribonuclease Inhibitor 368 495 IPR032675 -
Pste2g03376 740 Gene3D - 216 349 IPR027417 -
Pste2g03376 740 Pfam NB-ARC domain 238 338 IPR002182 GO:0043531
Pste2g03376 740 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 486 687 IPR044974 GO:0006952
Pste2g03376 740 Gene3D - 65 215 IPR035897 -
Pste2g03376 740 Pfam Leucine Rich Repeat 543 561 IPR001611 GO:0005515
Pste2g03376 740 ProSiteProfiles Leucine-rich repeat profile. 543 565 IPR001611 GO:0005515
Pste2g03376 740 SMART LRR_bac_2 667 687 - -
Pste2g03376 740 SMART LRR_bac_2 709 729 - -
Pste2g03376 740 SMART LRR_bac_2 625 645 - -
Pste2g03376 740 SMART LRR_bac_2 646 666 - -
Pste2g03376 740 SMART LRR_bac_2 604 624 - -
Pste2g03376 740 SMART LRR_bac_2 688 708 - -
Pste2g03376 740 SMART LRR_bac_2 583 603 - -
Pste2g03376 740 SUPERFAMILY L domain-like 671 737 - -
Pste2g03376 740 Pfam TIR domain 67 204 IPR000157 GO:0007165
Pste2g03376 740 PRINTS Disease resistance protein signature 249 264 - -
Pste2g03376 740 PRINTS Disease resistance protein signature 539 555 - -
Pste2g03376 740 ProSiteProfiles TIR domain profile. 66 201 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03376 Pste-Chr2 33831199 33838187 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03376 277 568 WRKY Transcription Factor Family AT4G12020 32.362 6.67e-32 132