Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03355 AAAGACTACTGACCAGTGCTGCTATGTTTGGATGAGGTAGAACAGTAGCAGAACACCACCTCATCATGTCAAGCAATGCATTAACTCTTTTTGTATTGTTTCTTAATATCTCCCTGTGTCCATCCATCTCTGCTCTGAACCAGGAAGGCCTCTCTCTTCTTTCATGGCTTTCAACCTTCAACTCCTCCAACTCTGCTACTGATTTCTCTTCATGGGATCCAACCCACAAAGATCCCTGCAAATGGGATTACATAGCATGCTCCAAAGAAGGTTTTGTGTCAGAGATCATAATAGCATCCATGGATCTACGTAGCAGCTTCCCCATACAACTCCATTCTTTTGACCACCTCACCACCCTTGTCATCTCAAATGGAAATCTCACTGGTGAGATTCCAAGTTCAGTGGGAAACTTATCCTCTTTGGTCACTTTGGACCTTAGCTTCAATGCTTTATCAGGAAGCATTCCAGAAGAAATAGGAATGCTATCTGAGCTGCAGTTGTTATTGTTGAATTCAAATTCCTTGCAGGGTGGAATTCCAATCACAATTGGAAACTGTTCAAAACTTCAGCATCTGGTACTTTTTGACAACCAGCTCTCTGGAATGATACCTGGAGAAATAGGCCAGTTGAGGGCTCTTGAAACACTAAGAGCAGGAGGAAATCCAGGTATTCATGGGGAAATTCCAATGCAGATATCAGGCCTCAAAGCCCTTGTTTTTCTGGGACTTGCAGTTACTGGGCTATCTGGGGAGATTCCAACAAGTATAGGAGAGCTTAAGAATCTCAAGACACTTTCTGTCTACACAGCAAATCTCACAGGACATATCCCAGCTGAAATTCAGAATTGCTCAGCCTTGGAGGATTTGTTTCTGTATGACAACCAACTTTCTGGAAGTATTCCTTATGAGTTGGGCTCCATGCATAGCCTCAGGAGGGTGTTGCTGTGGCAGAACAATTTAACTGGAACCATTCCAGAAAGTCTTGGGAACTGTACAAATCTCAAGGTTATAGATTTCTCTTTGAATTCTTTGGGGGGTCAGATACCTGTGACTCTCAGTAGTCTACTCTTGCTGGAGGAGTTTCTTTTGTCTGATAACAATATTTATGGAGAAATTCCTTCCTATATTGGCAACTTTTCCGGGCTGAAGCAAATTGAATTGGATAACAACAAATTCTCTGGTGAGATTCCACCTGTTATGGGACAACTGAAGGAACTCACCCTCTTCTACGCCTGGCAGAATCAACTAAGTGGAAGTATACCAGCAGAACTATCCAACTGTGAGAAACTTGAAGCACTTGATCTTTCACACAATTTCCTCACTAGTTCCATTCCGAATTCACTCTTTCATTTAGGAAATTTGTCTCAGTTGTTGCTAATATCAAACAGACTTTCAGGTCAAATTCCAGCGGATATTGGCAGTTGCACCAGCTTGATCAGGTTACGGCTGGGATCAAACAATTTTACTGGTCAAATTCCACCAGAAATAGGTCTTTTAAGCAGCTTGAGCTTTCTTGAGTTGTCAAATAATCTACTCAGTGGAGATATTCCCACTGAGATAGGTAACTGTGCTCATCTAGAATTGCTTGACTTGCATAGCAATGTGCTGCAAGGAACCATTCCTTCCTCATTGAAATTCCTAGTTGGTCTTAATGTATTAGATCTTTCTGCAAACAGAATAACTGGAAGCATTCCTGAGAATTTGGGCAAGCTTACGTCTCTAAATAAATTGATTCTAAGTGGAAACCTTATCTCTGGTGTGATTCCAGGAACACTGGGACTGTGTAAAAATTTGCAGTTGCTGGATATAAGTAACAATGTCCTTACTGGTTCTATTCCTGGTGAGATTGGTCATTTGCAAGGATTAGATATCCTCTTGAACTTGAGTTGGAATTCTCTTACTGACCCAATTCCTGAGACTTTCTCAAATCTCTCAAAACTCTCCATCTTGGACCTCTCTCACAACAAGCTCACAGGTACACTCATAGTACTGATTAGTCTTGACAATCTCGTGTCTCTAAATGTCTCTTACAATAGCTTTTCTGGTTCTCTTCCTGATACAAAGTTTTTCCTGGAACTACCTTCCGCTGCATTTGCTGGTAACCCTGACCTTTGCATTAGTAAGTGTCATGCAAGTGAAAATGGCCAAGGCTTTAAGTCAATAAGAAATGTTATTATCTACACTTTCCTTGGGATTGTTTTAATTTCTATTTCTGTTACTGGTGGGGTAATTTTAACTCTCAGGATTCAAGGGGGCAACTTTGGGAGGAATTTTGATGAAGGTGGTGAAATGGAATGGGCTTTCACTCCATTCCAGAAGCTCAATTTCTCCATCAATGACATCGTGACAAAGTTGTCAGAATCAAATATTGTGGGAAAGGGTTGTTCAGGAATTGTTTATCGCGTGGAAACTCCAATGAAACAGATTATTGCAGTGAAGAAGCTATGGCCAATAAAGAAAGAAGAGCCATCAGAGAGAGATCTGTTTACTGCTGAAGTTCAGACCCTTGGATCAATAAGACACAAGAATATAGTGAGACTTTTAGGATGCTGTGACAACGGAAGAACTAGGTTGCTATTGTTTGATTATATATGCAATGGGAGTTTGTTTGGATTGCTCCATGAAAATAGATTGTTCTTGGATTGGGATGCAAGGTATAAGATCATATTGGGAGCAGCTCATGGTTTAGAATATCTTCATCATGATTGTATCCCTCCAATTGTCCATAGAGACATTAAGGCTAACAACATCTTGGTAGGTCCACAATTTGAGGCTTTTCTTGCAGACTTTGGACTTGCAAAACTTGTGAATTCCTCAGATTGTTCAGGAGCCTCTCATACAGTTGCAGGTTCTTATGGATACATAGCTCCTGAATATGGATACAGTTTAAGGATCACTGAAAGGAGTGATGTGTACAGTTATGGTGTTGTGCTTCTTGAAGTCTTAACAGGGATGGAACCAACTGATAAGAGGATTCCAGAGGGTACCCACATTGTTACGTGGATTAGCGCTGAGATCCGAGATAAGAAAAGAGAATTTACATCTATCCTTGACCAGCAACTAGTATTGCAGAGTGGAACAAAAACCTCTGAGATGCTTCAGGTGCTAGGGGTGGCTCTCCTGTGTGTGAATCCATCCCCAGAAGAACGACCCACTATGAAAGATGTAACAGCAATGTTGAAGGAGATCAGGCATGAAAATGATGATTTCGAGAAACCAAATTTTCTCCATAAAGGCATGGTTATCGCCAATCCAAAAGCAGCAGTTCACTGTTCAAGTTTCTCCAGATCATGTGAACCTTTAATAATAGAATCAACATCTTCTTCTGTATAGCCACCAATTTGATTACTAAATTTTTTATTTTTTTCAAGTGACAAATTATTTATGTAAATTAGTATATTAATATGGATCAAGATCATTCTCTGTATGAGATATGGTCCTGTTAGAGAGGGAAAGCCACAAATATACTTGGCG 3473 0.4043 MSSNALTLFVLFLNISLCPSISALNQEGLSLLSWLSTFNSSNSATDFSSWDPTHKDPCKWDYIACSKEGFVSEIIIASMDLRSSFPIQLHSFDHLTTLVISNGNLTGEIPSSVGNLSSLVTLDLSFNALSGSIPEEIGMLSELQLLLLNSNSLQGGIPITIGNCSKLQHLVLFDNQLSGMIPGEIGQLRALETLRAGGNPGIHGEIPMQISGLKALVFLGLAVTGLSGEIPTSIGELKNLKTLSVYTANLTGHIPAEIQNCSALEDLFLYDNQLSGSIPYELGSMHSLRRVLLWQNNLTGTIPESLGNCTNLKVIDFSLNSLGGQIPVTLSSLLLLEEFLLSDNNIYGEIPSYIGNFSGLKQIELDNNKFSGEIPPVMGQLKELTLFYAWQNQLSGSIPAELSNCEKLEALDLSHNFLTSSIPNSLFHLGNLSQLLLISNRLSGQIPADIGSCTSLIRLRLGSNNFTGQIPPEIGLLSSLSFLELSNNLLSGDIPTEIGNCAHLELLDLHSNVLQGTIPSSLKFLVGLNVLDLSANRITGSIPENLGKLTSLNKLILSGNLISGVIPGTLGLCKNLQLLDISNNVLTGSIPGEIGHLQGLDILLNLSWNSLTDPIPETFSNLSKLSILDLSHNKLTGTLIVLISLDNLVSLNVSYNSFSGSLPDTKFFLELPSAAFAGNPDLCISKCHASENGQGFKSIRNVIIYTFLGIVLISISVTGGVILTLRIQGGNFGRNFDEGGEMEWAFTPFQKLNFSINDIVTKLSESNIVGKGCSGIVYRVETPMKQIIAVKKLWPIKKEEPSERDLFTAEVQTLGSIRHKNIVRLLGCCDNGRTRLLLFDYICNGSLFGLLHENRLFLDWDARYKIILGAAHGLEYLHHDCIPPIVHRDIKANNILVGPQFEAFLADFGLAKLVNSSDCSGASHTVAGSYGYIAPEYGYSLRITERSDVYSYGVVLLEVLTGMEPTDKRIPEGTHIVTWISAEIRDKKREFTSILDQQLVLQSGTKTSEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHENDDFEKPNFLHKGMVIANPKAAVHCSSFSRSCEPLIIESTSSSV 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03355 1088 SMART serkin_6 763 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03355 1088 Gene3D Ribonuclease Inhibitor 521 603 IPR032675 -
Pste2g03355 1088 Gene3D Transferase(Phosphotransferase) domain 1 842 1058 - -
Pste2g03355 1088 Gene3D Phosphorylase Kinase; domain 1 739 841 - -
Pste2g03355 1088 Pfam Leucine Rich Repeat 604 622 IPR001611 GO:0005515
Pste2g03355 1088 Pfam Leucine Rich Repeat 407 429 IPR001611 GO:0005515
Pste2g03355 1088 PRINTS Leucine-rich repeat signature 119 132 - -
Pste2g03355 1088 PRINTS Leucine-rich repeat signature 622 635 - -
Pste2g03355 1088 Gene3D Ribonuclease Inhibitor 23 200 IPR032675 -
Pste2g03355 1088 SMART LRR_typ_2 549 572 IPR003591 -
Pste2g03355 1088 SMART LRR_typ_2 477 501 IPR003591 -
Pste2g03355 1088 SMART LRR_typ_2 597 621 IPR003591 -
Pste2g03355 1088 SMART LRR_typ_2 333 357 IPR003591 -
Pste2g03355 1088 SMART LRR_typ_2 405 429 IPR003591 -
Pste2g03355 1088 SMART LRR_typ_2 285 309 IPR003591 -
Pste2g03355 1088 SMART LRR_typ_2 645 678 IPR003591 -
Pste2g03355 1088 SMART LRR_typ_2 116 140 IPR003591 -
Pste2g03355 1088 SMART LRR_typ_2 525 548 IPR003591 -
Pste2g03355 1088 ProSitePatterns Protein kinases ATP-binding region signature. 769 797 IPR017441 GO:0005524
Pste2g03355 1088 Pfam Protein kinase domain 765 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03355 1088 SUPERFAMILY Protein kinase-like (PK-like) 750 1047 IPR011009 -
Pste2g03355 1088 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 842 1056 - -
Pste2g03355 1088 SUPERFAMILY RNI-like 81 418 - -
Pste2g03355 1088 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 739 841 - -
Pste2g03355 1088 ProSiteProfiles Protein kinase domain profile. 763 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03355 1088 Gene3D Ribonuclease Inhibitor 604 690 IPR032675 -
Pste2g03355 1088 Gene3D Ribonuclease Inhibitor 422 520 IPR032675 -
Pste2g03355 1088 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 200 325 - -
Pste2g03355 1088 SUPERFAMILY RNI-like 269 659 - -
Pste2g03355 1088 Pfam Leucine rich repeat N-terminal domain 25 66 IPR013210 -
Pste2g03355 1088 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Pste2g03355 1088 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Pste2g03355 1088 ProSiteProfiles Leucine-rich repeat profile. 407 429 IPR001611 GO:0005515
Pste2g03355 1088 Gene3D Ribonuclease Inhibitor 201 421 IPR032675 -
Pste2g03355 1088 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 24 199 - -
Pste2g03355 1088 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 430 1039 - -
Pste2g03355 1088 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 407 691 - -
Pste2g03355 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 885 897 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03355 Pste-Chr2 33599596 33603451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03355 23 1077 Receptor kinase-like Gene Family AT5G56040 47.091 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste2g03355 Pkinase 5.4e-42 CL0016