Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03346 CCTGTCCCCAGTTTTGCTTCAGCAGAGGATCATGGCCTGAGGGCTATTCCTTCACCATTATTCACTCTTGAAGCTACCGCCAATAATTTCTCACTTGACAAGAGTTTTAACTACGTGAGTTCCAACGTGCAAGAAATAACTTTAGTGATAAAAACTTTCTGGGTAGAGGCGGATTTCGAAAGCCTAGCTGATGGATCTCTTGTAGCAGTAAAAAAACTTAAGGGTGGGGAGCAGGAATTTCAAACTGAAGTGGAGATTAGCAGCATGGCTGTGCATCGTAATTTGCTTCGTCTTCGTGGTTTTGGTATGACACCTTTCTTGGTTAATGGAAGCGTAGAATCATGTTTAAGAGGACGTCAAGAATCTCAAAGACCACTTGGCTGGTCAGAACGGGAGCGTATTGCACTGGGATCTGCAAGGGGACTTGCTTACTTGCACGATCATTGTGATCCTAAGATTATTCATCGTGATGTCAAAGCAGCAAATATATATTTGGACGACGAACTTGAAGCAGTTGTTGGAGATTTTGGTTTAGCAATACTTATGAATCCTAAAGATACTCATGTTACTACTGTTGTACGTGGAACGCTTGGGCATATAGCACCAGAGTATCTCTTAACTGGAATGTGTTCAGAGAAGAGTGATGTTTTTGGATATGGTGTGATGCTTCTTGAACTAATAAGTGGACAAAGAGATTTTTATCTAGCTCGACTTGCCAAAGATGGTAATCTGATGTTGCTTAATTGGGTTAAAGGACTTCTCAAAGACAAAAAATTGGAGACATTAGTAGATGCAGATTTGCAGGGCAATTGTAATGAGGAGGAGGTAGAGAAGTTAATCCAATTGGCCTTAGTATGCACACAATACTCTCCTACTGAAAGACCAAAGGTGTCTGAGGTGGTCATAATGCTAAAAGGTGCTGGGTTGGCTGAGAAATGGGAGCAATATTTGCAGAAAGACAAGATTTTCTGGCAAGATTCTTGCAATAGAATGAACTATTCTATTGATCAAATTGAAAGTGAAAGTGAAAGTGAAAGTGAAAATGGAAGCATTGACATGGATTTTGGTTGGAGAGTGGACCATGCGATAATGAGTGAGAGTGGCTCAAATTTGGGAGCATCCCCTGTCCATAGTTTTACTTCCATATTGGACAATGCAATCAGGAGTGAGGCAGTATCAATTTTCGGATCCTCACCTGTCCCTAGTTTTGTTTCAGCAGAGGATAATGTCATGACATCATTATTCAGTTCAGCACACGTCAATAATTTCTCACTTCACAACAGTACTGCGAACAGAGGTAATAGTAATACTGGAGGAAGAGGATTTGCTGCTCGGTTGTTTGCACTTGCTAATTGGCGAAGAAGGAAGCCTCTTGCCGCAGCGTGCAAAAGGTTTTCTCTGCGTGAGCTGCAGCGTGCTACAGATAACTTTAGTTACAAAAACTTTTTGGGTAGTGGTGGATTTGGAAAGGTTTATAAGGGACGCTTAGCTGATGGATCTCTTGTTGCTGTTAAAAGACTCAAACAGCAACCCAAGCAGGGTGATGACCAGCAATTTCAAACTGAAGTGGCTATTATCAGCATGATTGTGCATCGTAATCTGCTTCCTCTTCGTGGTTTTTGTATAGCACGCAATGAACGATTACTTGTGTACCCTTTCATGGTTAATGGAAGTGTACTATCATGTTTAAGAGAACGTCAAGAATCTCAACGACCACTTGGCTGGCCAGATCGGAAGAGTATTGCACTGGGATCTGCAAAGGGGCTTGCTTATTTGCATGATCATTGTGAGCCTAAGATTATTCATCGTGATGTCAAAGCAGCAAATATATATTTGGACGACGAACTTGAAGCAGTTGTTGGAGATTTTGGTTTAGCAATACTTATGAATCCTAATGATACTCATGTTACTACTGTTGTACGTGGAACGCTTGGGCATATAGCACCAGAGTATCTCTTAACTGGAATGTGTTCAGAGAAGAGTGATGTTTTTGGATATGGTATGATGCTTCTTGAACTAATAAGTGGACAAAGAGATTTTTATGTAGCTCGACTTGCCAAAGATGGTAATGTGATGTTGCTTAATTGGGTTAAAGGACTTCTCAAAGACAAAAAATTGGAGACATTAGTAGATGCAGATTTGCAGGGCAATTGTAATGAGGAGGAGGTAGAGAAGTTAATCCAATTGGCCTTACTATGCACACAATACTCTCCTACTGAAAGACCAAAGATGTCTGAGGTGGTCATAATGCTAAATGGTATTGGGTTGGCTGAGAAATGGGAGCAATATTTGCAGAAAGACAAGATTTTCTGGCAAGATTCTTGCAACAGAATGAGCTATTCTATTGGTTCCTTATTTCTGAAAGGTTTCGACATTGACACAATCCAGCAGCATTACACCGTG 2403 0.4087 PVPSFASAEDHGLRAIPSPLFTLEATANNFSLDKSFNYVSSNVQEITLVIKTFWVEADFESLADGSLVAVKKLKGGEQEFQTEVEISSMAVHRNLLRLRGFGMTPFLVNGSVESCLRGRQESQRPLGWSERERIALGSARGLAYLHDHCDPKIIHRDVKAANIYLDDELEAVVGDFGLAILMNPKDTHVTTVVRGTLGHIAPEYLLTGMCSEKSDVFGYGVMLLELISGQRDFYLARLAKDGNLMLLNWVKGLLKDKKLETLVDADLQGNCNEEEVEKLIQLALVCTQYSPTERPKVSEVVIMLKGAGLAEKWEQYLQKDKIFWQDSCNRMNYSIDQIESESESESENGSIDMDFGWRVDHAIMSESGSNLGASPVHSFTSILDNAIRSEAVSIFGSSPVPSFVSAEDNVMTSLFSSAHVNNFSLHNSTANRGNSNTGGRGFAARLFALANWRRRKPLAAACKRFSLRELQRATDNFSYKNFLGSGGFGKVYKGRLADGSLVAVKRLKQQPKQGDDQQFQTEVAIISMIVHRNLLPLRGFCIARNERLLVYPFMVNGSVLSCLRERQESQRPLGWPDRKSIALGSAKGLAYLHDHCEPKIIHRDVKAANIYLDDELEAVVGDFGLAILMNPNDTHVTTVVRGTLGHIAPEYLLTGMCSEKSDVFGYGMMLLELISGQRDFYVARLAKDGNVMLLNWVKGLLKDKKLETLVDADLQGNCNEEEVEKLIQLALLCTQYSPTERPKMSEVVIMLNGIGLAEKWEQYLQKDKIFWQDSCNRMSYSIGSLFLKGFDIDTIQQHYTV 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03346 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Pste2g03346 801 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 455 762 - -
Pste2g03346 801 SUPERFAMILY Protein kinase-like (PK-like) 458 751 IPR011009 -
Pste2g03346 801 ProSiteProfiles Protein kinase domain profile. 21 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03346 801 Gene3D Phosphorylase Kinase; domain 1 450 553 - -
Pste2g03346 801 Gene3D Phosphorylase Kinase; domain 1 23 107 - -
Pste2g03346 801 ProSitePatterns Protein kinases ATP-binding region signature. 483 505 IPR017441 GO:0005524
Pste2g03346 801 ProSiteProfiles Protein kinase domain profile. 477 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03346 801 SMART serkin_6 59 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03346 801 SMART serkin_6 477 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03346 801 FunFam Somatic embryogenesis receptor kinase 1 447 553 - -
Pste2g03346 801 SUPERFAMILY Protein kinase-like (PK-like) 63 310 IPR011009 -
Pste2g03346 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Pste2g03346 801 Pfam Protein tyrosine and serine/threonine kinase 480 749 IPR001245 GO:0004672|GO:0006468
Pste2g03346 801 FunFam Somatic embryogenesis receptor-like kinase 1 554 770 - -
Pste2g03346 801 Pfam Protein kinase domain 64 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03346 801 FunFam Somatic embryogenesis receptor-like kinase 1 107 323 - -
Pste2g03346 801 Gene3D Transferase(Phosphotransferase) domain 1 108 324 - -
Pste2g03346 801 Gene3D Transferase(Phosphotransferase) domain 1 554 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03346 Pste-Chr2 33515983 33526775 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03346 442 799 Receptor kinase-like Gene Family AT4G33430 67.024 5.75e-164 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pste2g03346 PK_Tyr_Ser-Thr 2.2e-42 CL0016