Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03345 GAGAAAGTGGAGTTTGTAGAGAGAGAGAGAGAAAGTGTGGGAAGGTAGTATTTGCAGTCTTAATTGAGAGGCTCTTAAGAGGGTATATATAAAGAGAGGCATAGGGCTTGAGTTCATACCCTTCTCTCTTTCATTCACTTTCTTGGGATACAGAATTCTCATTCAATGACCCTTTAATCTTTTCTATCCCTTTCTGCCTCTCAAACTTGGTTGTGTTTGCAGTGCTCTTTTGTCTTTGCTCAACTTAAAACATGGCAGGGGACAAGGGATCCATCACTCTTGAAGAGATCAAGAACGAGACTGTTGATCTGGAACGTATTCCAATTGAGGAAGTGTTTGAGCAACTAAAATGTACCAGGGAAGGTTTGTCCTCAGCGGAAGGAGAAAACAGGCTTCAAATATTTGGACCCAACAAACTAGAAGAGAAGAAGGAAAGCAAACTTCTCAAGTTTCTTGGGTTCATGTGGAATCCACTTTCATGGGTCATGGAGGCTGCAGCTATAATGGCCATTGCTCTTGCAAACGGTGAAGGGAAGCCTCCGGATTGGCAAGATTTTGTTGGTATTGTTTGCTTGTTGATTATCAACTCCACTATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCTGCTGCTCTTATGGCTGGTCTTGCTCCAAAAACAAAGGCAAGGGCTGGGATAAGAGAGGTTCACTTCCTACCATTTAATCCTGTTGACAAGAGAACTGCTTTGACATACATCGATGCTAGTGGAAATTGGCACCGGTCAAGCAAAGGTGCTCCTGAGCAGATCATGTCCCTTTGTAACCTTAGGGATGATGCTAAGAAGAAGGTTCATGCGATTATTGACAAGTTTGCAGAAAGAGGGCTTCGTTCACTTGCTGTTGCTAGACAGGAAGTTCCTGAGAAATCAAAAGAAAGTGCTGGTGCTCCATGGCAGTTTGTTGGTTTGTTGTCACTGTTTGATCCCCCTAGGCATGACAGTGCTGAAACCATTCGCCGAGCTCTTAACCTTGGTGTAAATGTTAAGATGATTACAGGTGATCAACTTGCTATAGCTAAGGAAACAGGAAGGAGACTTGGAATGGGAACAAATATGTATCCATCTGCTTCATTGCTTGGTCAAGATAAAGATGCAAATATTGCTGCACTTCCTGTAGAAGAACTTATTGAAAAGGCAGATGGATTTGCTGGAGTTTTCCCAGAGCACAAATATGAAATTGTAAAGAAGCTGCAAGAGAGGAAGCACATTTGTGGAATGACTGGAGATGGTGTCAATGATGCTCCTGCATTGAAGAAGGCAGATATTGGAATTGCTGTTGCTGATGCTACTGATGCTGCAAGAAGTGCTTCTGACATTGTCTTGACAGAACCTGGATTGAGTGTTATTATTAGTGCAGTCTTAACTAGCAGAGCTATCTTCCAAAGAATGAAGAACTACACGATATATGCAGTATCTATCACAATCCGTATAGTGTTTGGCTTCATGTTCATTGCGCTGATCTGGAAATTTGACTTCTCTCCCTTTATGGTTTTGATTATTGCCATTCTAAACGATGGAACAATCATGACAATTTCAAAGGACAGGGTTAAGCCATCTCCCATGCCTGATAGCTGGAAACTGAGAGAAATATTTGCTACTGGGGTTGTACTTGGAGGTTACTTGGCACTGATGACTGTTATATTCTTCTGGGCGATGAAGGAGACTAGGTTCTTCCCTGACAAATTTGGAGTTAGACCAATTCATGACAGTCCAGATGAAATGACTGCTGCTTTGTATCTACAAGTCAGTATTGTTAGCCAGGCTTTGATATTTGTCACCCGTTCACGCAGCTGGTCCTATGTTGAACGCCCTGGACTGCTATTAGTGAGCGCTTTCGTTATTGCTCAGCTGATTGCTACAATAATAGCAGTGTATGCCAACTGGGGCTTTGCAAGGATCAAGGGAATTGGTTGGGGTTGGGCAGGAGTGATTTGGCTCTACAGTATTGTCTTCTATGTTCCACTTGACTTGATGAAGTTTGCCATCCGCTACATCTTGAGTGGAAAAGCTTGGTTGAATCTCCTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTATGGTAAGGAGGAAAGGGAGGCTCAATGGGCTCTTGCTCAGAGGACATTGCATGGACTTCAACCACCAGAAACTTCTAGCATCTTTAATGAGAAGAGCAGCTATAGAGAACTGCTTCGTGAGCTTCACACACTTAAGGGACATGTTGAGTCTGTGGTGAAGCTGAAAGGTTTGGACATTGACACAATCCAGCAGCATTACACCGTGTAATAAACAACACAAGAACGTTGTAGATAGCAAAAGGGCCAAAATTCAATGTTTTAAAATGAATGGAGATACAAGGAGAAGGCCTAACTCTATTTATGCTTACTAGGTAGGGAGAGGAAGCCTGTGATATATCTCTCTCTCAGTCTGTTTATCATTTTTCATGTATTTTCAGATGTTCTGGTCTAAATTTTTGCATTGATGTTTGAGGAAAAGTGATGTTAATTAATTAGGAGTAAATCCTTGCTTTTCCCTTCATTTTCATATGCTTTTGGGTCCTTCCTCAACCAGGGTGGTTAATAGTTATTGTATGTCACTTTAAAGTGGCAGTGATTAGACAATGAGCTTATTGGGAATTTTGTGGTGGGATAATAAGAGTTTATCAAAGCTTTAACGGCATCATGCAAAATTTGCAACTTTGAATTGGTTTCAACACAGTCTTTTTAATGTTATTTGTCTGTTTTCTTGAAACACTACCATAGAAAGATTCAGTTTCTGTACAAAAAAAAAAAAAAAAAATCCAGTTCTAGGGGAAGAAATAAAGGCCTATAA 2858 0.4108 MAGDKGSITLEEIKNETVDLERIPIEEVFEQLKCTREGLSSAEGENRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGEGKPPDWQDFVGIVCLLIINSTISFIEENNAGNAAAALMAGLAPKTKARAGIREVHFLPFNPVDKRTALTYIDASGNWHRSSKGAPEQIMSLCNLRDDAKKKVHAIIDKFAERGLRSLAVARQEVPEKSKESAGAPWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDANIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLREIFATGVVLGGYLALMTVIFFWAMKETRFFPDKFGVRPIHDSPDEMTAALYLQVSIVSQALIFVTRSRSWSYVERPGLLLVSAFVIAQLIATIIAVYANWGFARIKGIGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSSIFNEKSSYRELLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03345 686 FunFam ATPase 4 plasma membrane-type 323 565 - -
Pste2g03345 686 Gene3D - 339 596 - -
Pste2g03345 686 SUPERFAMILY Calcium ATPase, transmembrane domain M 19 597 IPR023298 -
Pste2g03345 686 SMART Cation_ATPase_N_a_2 19 91 IPR004014 -
Pste2g03345 686 Gene3D - 235 299 IPR023214 -
Pste2g03345 686 FunFam Plasma membrane ATPase 230 386 - -
Pste2g03345 686 FunFam Membrane H(+)-ATPase1 178 238 - -
Pste2g03345 686 Pfam Cation transporter/ATPase, N-terminus 23 85 IPR004014 -
Pste2g03345 686 Gene3D - 105 234 IPR023299 GO:0000166
Pste2g03345 686 PRINTS P-type cation-transporting ATPase superfamily signature 255 265 - -
Pste2g03345 686 PRINTS P-type cation-transporting ATPase superfamily signature 361 373 - -
Pste2g03345 686 PRINTS P-type cation-transporting ATPase superfamily signature 338 357 - -
Pste2g03345 686 PRINTS P-type cation-transporting ATPase superfamily signature 233 244 - -
Pste2g03345 686 PRINTS H+-transporting ATPase (proton pump) signature 338 354 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g03345 686 PRINTS H+-transporting ATPase (proton pump) signature 310 326 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g03345 686 PRINTS H+-transporting ATPase (proton pump) signature 369 394 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g03345 686 PRINTS H+-transporting ATPase (proton pump) signature 195 213 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g03345 686 PRINTS H+-transporting ATPase (proton pump) signature 510 531 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g03345 686 Gene3D - 651 686 - -
Pste2g03345 686 PANTHER CALCIUM-TRANSPORTING ATPASE 136 633 - -
Pste2g03345 686 Pfam haloacid dehalogenase-like hydrolase 172 352 - -
Pste2g03345 686 NCBIfam HAD-IC family P-type ATPase 313 427 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g03345 686 SUPERFAMILY HAD-like 191 385 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03345 Pste-Chr2 33504695 33513897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03345 103 686 Primary Pumps ATPases AT2G24520 78.798 0.0 979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03177 6 20016008 20023801 Pste2g03345 2 33504695 33513897 PCT