Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03343 CAAATAACAGTAATTTCCACATGTGCCATTAATTTAAAAGTCATACTCAGAGAGTGGGTGAATGAAAAGAGCTAAGCAATTTGTTGTGATTGTATTCATCAGAAATTCCTTCATCGCCAAACAGGACACCACAATGAAGGAATTGGGCGTGGTTGCTGTCCTGTTTTCAATAGAGTTTTTGGACGTGATTGTCTACACCGTAAGCAAAGCAGCCATGACAAAGGGCATGAACGATTTTGTCTTTGTCATGTACTCCAATGCTTTTGCAACTTGCTTCCTTCTTCCCATAACCTTAATCTTCTATAGGAAAAGAGTTCTTCCTCCACTAACAAATAGCATAATTAGCCGATTATTTATTAATGGCCTGTTAAGTTGCACTGTTCAGTTGCTCAGGTTTTTTGGAATAGGTTACAGCTCTCCTACTTTGGCCACTGCAATGGCTGATTTAATCCCTGCTTTTACCTTCATACTTGCCATTGCCTTCAGGATGGAAAAATTGGACTGGAAAACTAATAGCACTCGGGCCAAGTCCTTTGGCACATTGGTATCAATCACAGGAGCCTTGATAATTACACTGTACAAAGGCCAGGCACTCATAAACAATCATCCATCTAATAGTTTGTTTCCCAAAAAACTTGTTTCATCTAAGCAATTTGACTGGGTAATAGGGGCAATGTTCCTTGCGGGTCATAGCTTTGTTCTGTCATTGCTGTTTATAGTTCAGACATGGATAATCAGAAATTACCCTGCAGAGCTTGTGATAGTGCTCACTCGCGGTATATTAGTTTCAATGCTATCTCTCCCAGTTTCACTGATTTCAGAGAAGGATCCAAAAGCTTTGAGACTGGCATTTGATATGCAGTTGGTAGCTGTAGCATGTCAAGCAATTTTGGGTGTATCCTTGCGAAGTATTGTTCATATATGGGTGATGAGTAAGAAAGGTCCTCTATATGTTGCAATGTTTAAGCCAATTGGAATTATCTTTGCGGTCATAATGGGTATTACGTTTCTTGGTGACTCTCTCTATCTTGGCAGTGTGATAGGAGCAGGCATAGTGGTTATTGGATTTTATGCTGTTATTTGGGGGAAAAGCCAAGAGCAAGCCAAGGAAGAGTACCAAGACTATACTACCTTGGGCTCATACTCACCCGCTTTTCCATCATATGCCTGCATCAGACTTCATAATAACATCCCCGCGATCCAATCCAACGGTTATGTTTTGCGGTGCAGAGAAAAGCTTGGTAGAGCGACAGGAGAGGATGGAAAGTGGATGACAAGATTGAGGAAGAGAGACAGAGAAGGGAAGTTGATTCTTTGGTTGAATAGTGTTGACGTATTGGGGTCTGTGAAAATGGGCAAGTTAACTCTTCCTTTTGTTGGAATGATTATGGCTGAGTTTGCTCAAGTTGGGTTAATCATATTGAGCAAACAAGCCATGGCACATGGAATCACCAATTTCATTTTCATCTTCTATTCCAACACAATCGCTGCCCTCCTCCTTCTTCCAATTTCCTTCCTTTTACACAGATTTCAACGTCCTCCAATCACCTTCTCCGTCCTTTGTGGATTCTTCTTACTTGCACTACTCGGTTATTTGGCGCAGGCTCTTGGCTACGCCGGCATTTACTACGGCTCAGCTACACTCAGTACATCCATGCTCAACCTCGTTCCTGGCTTTACTTTTATACTTGCTGTTCTTTTTAGAATGGAACAATTGGATTTGAGGAAATTTGGCAGCTTAGCTAAATCATTGGGAACAATAGTTTCAATTGTTGGTGCATTTATTGTGACTTTGTACAAGGGCCCTGCACTTTTGATGAGAGTATCATCAGCAAATTCATCTCAGCAGCCACTTCTATCAGAAGATTTGAATTGGATACTTGCAGGATTATTTCTTGCAGCTGATTGTATAATGGCTTCAGCATATATTATAGTACAGGCTTCTATTCTTCAGAAATATCCAGCAGAGTTGATCGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCAATCGGGTGTGACCTGTTTGGTTGTCGAAAGAGACATCAGTGCTTGGAGCTTGGAGCCTAAGCTAAGGTTGCTTGCAGTTTTATACTCGGGTGTCTTTGGCTCTGCTTTTCAAGTTGGTGTTATTTCCTGGTGTTTGCATCAGACAGGACCTGTTTTTGTTTCAATGTTCAAGCCTTTAGGAATTGTTATATCAGTGGTTTTAGGTGTTCTCTTACTCGGGGATGCATTCTATCTTGGAAGTCTGATTGGTGCTACTGTGATTGTTGTTGGGTTTTATTCTGTATTATGGGGGAAGGCCAAAGATATTGAAGATGTTAGACTGAGAAGCTTGGAATCAAAGGGCAAACAGACCCCCCTTCTGGAGGAAAACAGCCATGAAGACATACAAGGGCATTAGTTCATTTAAAAGGATGCTCCAATTCTGCCAGCAAATAGACAGTTTCAACGGCGTTATTTAGAATAAGGAAGTCTACTGATCTGCTCTGACTCTCAGTAATATATTATTTCTCTCCTTTTTTCCGGGGAGGCGCTAGTTGGCCTACGGTTGGAATTTATGGATGACGCCGAGCTTGTGAATTGTAACATGTTCTGTTAGCATTGTAATAATCCATCTTCTGTAAAGAAAAGAAAATAGTTCATCTAAACATCAGGATCCTGTTGAATCTTGATTTTGAAGTCTAGAAAGAAACTAATGTTAACTAATTCTGAAATGAAAATCCTTCGGT 2735 0.4059 MKRAKQFVVIVFIRNSFIAKQDTTMKELGVVAVLFSIEFLDVIVYTVSKAAMTKGMNDFVFVMYSNAFATCFLLPITLIFYRKRVLPPLTNSIISRLFINGLLSCTVQLLRFFGIGYSSPTLATAMADLIPAFTFILAIAFRMEKLDWKTNSTRAKSFGTLVSITGALIITLYKGQALINNHPSNSLFPKKLVSSKQFDWVIGAMFLAGHSFVLSLLFIVQTWIIRNYPAELVIVLTRGILVSMLSLPVSLISEKDPKALRLAFDMQLVAVACQAILGVSLRSIVHIWVMSKKGPLYVAMFKPIGIIFAVIMGITFLGDSLYLGSVIGAGIVVIGFYAVIWGKSQEQAKEEYQDYTTLGSYSPAFPSYACIRLHNNIPAIQSNGYVLRCREKLGRATGEDGKWMTRLRKRDREGKLILWLNSVDVLGSVKMGKLTLPFVGMIMAEFAQVGLIILSKQAMAHGITNFIFIFYSNTIAALLLLPISFLLHRFQRPPITFSVLCGFFLLALLGYLAQALGYAGIYYGSATLSTSMLNLVPGFTFILAVLFRMEQLDLRKFGSLAKSLGTIVSIVGAFIVTLYKGPALLMRVSSANSSQQPLLSEDLNWILAGLFLAADCIMASAYIIVQASILQKYPAELIVVFFYCFFVAIQSGVTCLVVERDISAWSLEPKLRLLAVLYSGVFGSAFQVGVISWCLHQTGPVFVSMFKPLGIVISVVLGVLLLGDAFYLGSLIGATVIVVGFYSVLWGKAKDIEDVRLRSLESKGKQTPLLEENSHEDIQGH 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03343 781 SUPERFAMILY Multidrug resistance efflux transporter EmrE 66 174 - -
Pste2g03343 781 SUPERFAMILY Multidrug resistance efflux transporter EmrE 666 749 - -
Pste2g03343 781 Pfam EamA-like transporter family 610 745 IPR000620 GO:0016020
Pste2g03343 781 Pfam EamA-like transporter family 442 577 IPR000620 GO:0016020
Pste2g03343 781 Pfam EamA-like transporter family 42 170 IPR000620 GO:0016020
Pste2g03343 781 SUPERFAMILY Multidrug resistance efflux transporter EmrE 474 579 - -
Pste2g03343 781 PANTHER WAT1-RELATED PROTEIN 437 752 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03343 Pste-Chr2 33469773 33480809 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03343 436 777 Nodulin-like Gene Family AT5G40240 42.241 7.44e-83 267