Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste2g03342 | AATAGGTTTACCGTTTACCCAAACTTGAACTAAGTTGTTCTCACATTCTCGTCGCTACACTCACTCTTTCGCCGCCAATGGAAGTTTCTTCGGAGGCGCCGTCGCCGTCGCCGTCTAATGGCACCAGCGAAACCATAAGCAAGAATGCACTGAAGCGAGAAATGAAGAACAAACAGAGAGAAGAAGAAAGGAAGCGTAAGGAAGAGGAGAAGGCCAAAAAGGCGGCTGAAAAGGCTGAAATGCAGAAGGCTAAGGATAACAAATCTGCACCTGCTGCTGATGAGGATGATATGGACCCTACGCAATACCTTGAGAATAGGCTGAAGTATCTTGCAGTCCAGAAGGCAGAAGGGAAGAACCTGTATCCACATAAATTCTTTGTGACTATGTCTATTGATGAATACATTAACGAATATGGAGGTTTAAGTGAAGGGCAACACCTTGAGGATGTCTCTGTGTCTTTGGCTGGACGAATCATGACCAAGCGCACCTCTGGTTCTAAGCTTGTCTTTTATGACTTGCATGGTGGAGGTTTCAAGGTCCAGGTTATGGCTGATGCCAGTAAATCAGACTTTGATCAGGTTGAATTTTCCAAATTCCATTCTAATGTGAAGCGTGGTGACATAGTTGGTATCACTGGATTTCCAGGAAAGAGTAAGAAGGGTGAACTTAGTATTTTCCCCAAAACATTTGTGGTGCTGTCTCATTGTTTGCATATGATGCCTAGGCAAAAGTCTGCTGCTGCTGCTGATAATGCAAATTTGAAGGGAAATCCATGGGTACCAGGAAGTACCAGGAACCCTGAAGTATATATTTTGAAAGATCAGGAAACTAGATATCGGTTACGCCATCTGGATTTGATGCTTAATCCAGAGGTTCGAGAAATATTTAAGACCAGGTGTAAAATCATTTCTTACATCAGGAGGTTCCTTGATGACCTTGATTTCTTGGAGGTTGAAACACCTATGATGAACATGATTGCTGGTGGAGCAGCAGCCCGTCCATTTGTAACCCATCACAATGAACTTAACATGAGGTTATTCATGAGGATTGCTCCAGAACTGTATCTTAAGGAGTTGGTTGTTGGTGGACTGGATCGTGTTTATGAAATTGGTAAACAATTTAGGAATGAGGGTATAGATTTAACTCATAATCCTGAGTTTACTACCTGTGAGTTCTATATGGCTTATAAGGACTACAATGACTTAATGGATATAACAGAGCAAATGTTGAGTGGTATGGTTAAGGAACTTACCAAGGGCAGCTATAAAATCAAGTATCATGCAAATGGGATTGACAAGGAACCTATAGAAATTGACTTTACTCCACCTTTCAGAAGGATTGACATGATTGAAGAATTAGAGAAGATGGCAGGCCTCAATATTCCCAAAGACTTGGCCAGTGAGGAAGCTAATCAATATCTGAAGGATGTCTGTTTGAAGTATGAGATCAAATGTCCTCCCCCGGAGACAACTGCACGTTTGTTAGATAAACTTGTGGGTCACTTTTTGGAAGAAACGTGTGTAAATCCTACATTCATCATAAACCATCCTGAGATAATGAGTCCTTTAGCAAAGTGGCACAGATCAAAGCCAGGCCTGACTGAACGTTTTGAATTATTTATTAATAAACACGAACTTTGCAATGCGTATACTGAATTGAATGATCCTGTAGTACAACGACAGAGATTTGCTGAACAACTCAAGGATCGGCAATCAGGTGATGATGAAGCAATGGCCTTGGATGAAACATTTTGTATGGCTCTGGAGTATGGTTTGCCACCTACTGGTGGTTGGGGTTTGGGTATTGATAGGTTAACCATGTTACTGACAGATTCACAGAATATTAAGGAGGTTCTTCTTTTCCCTGCCATGAAACCTCAAGATTGAGCCCTTAACCAAAGCTGGGTTTAAATCTTCATATGCAAGAACTTGAGAAACGCAAGATGGATCTCAGTTTTGATCTGTTTATTTGATTAGTAGATTTGCCTTCGACTGGTCATGCAGCATCAACACTTGTTGATCTATCATTTAAGGGCTCTTGGGAGGGGTGTTATTCTATATATTATCTTTTGTTCATTGAATTGTTCGTTATCTCATACCAACTTTTTAGTACTCCTCCATTATATAAGGCAGTTGTTTTTGGGGTTTTTTCTTCTTCAAAATTTCGGATGTTTTAAGAATTTTAATATATAATTGTGC | 2201 | 0.4048 | MEVSSEAPSPSPSNGTSETISKNALKREMKNKQREEERKRKEEEKAKKAAEKAEMQKAKDNKSAPAADEDDMDPTQYLENRLKYLAVQKAEGKNLYPHKFFVTMSIDEYINEYGGLSEGQHLEDVSVSLAGRIMTKRTSGSKLVFYDLHGGGFKVQVMADASKSDFDQVEFSKFHSNVKRGDIVGITGFPGKSKKGELSIFPKTFVVLSHCLHMMPRQKSAAAADNANLKGNPWVPGSTRNPEVYILKDQETRYRLRHLDLMLNPEVREIFKTRCKIISYIRRFLDDLDFLEVETPMMNMIAGGAAARPFVTHHNELNMRLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYKDYNDLMDITEQMLSGMVKELTKGSYKIKYHANGIDKEPIEIDFTPPFRRIDMIEELEKMAGLNIPKDLASEEANQYLKDVCLKYEIKCPPPETTARLLDKLVGHFLEETCVNPTFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCMALEYGLPPTGGWGLGIDRLTMLLTDSQNIKEVLLFPAMKPQD | 603 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste2g03342 | 603 | PANTHER | LYSYL-TRNA SYNTHETASE | 17 | 603 | - | - | |
| Pste2g03342 | 603 | PIRSF | LysRS2 | 10 | 603 | IPR034762 | GO:0004824|GO:0005524|GO:0006430 | |
| Pste2g03342 | 603 | Gene3D | - | 75 | 217 | IPR012340 | - | |
| Pste2g03342 | 603 | CDD | LysRS_core | 264 | 601 | IPR018149 | GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 | |
| Pste2g03342 | 603 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Pste2g03342 | 603 | CDD | LysRS_N | 126 | 261 | IPR044136 | GO:0000166 | |
| Pste2g03342 | 603 | Gene3D | Bira Bifunctional Protein; Domain 2 | 245 | 603 | IPR045864 | - | |
| Pste2g03342 | 603 | Pfam | OB-fold nucleic acid binding domain | 127 | 204 | IPR004365 | GO:0003676 | |
| Pste2g03342 | 603 | Hamap | Lysine--tRNA ligase [lysS]. | 80 | 602 | IPR002313 | GO:0004824|GO:0005524|GO:0006430 | |
| Pste2g03342 | 603 | Pfam | tRNA synthetases class II (D, K and N) | 249 | 599 | IPR004364 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Pste2g03342 | 603 | ProSiteProfiles | Aminoacyl-transfer RNA synthetases class-II family profile. | 276 | 601 | IPR006195 | - | |
| Pste2g03342 | 603 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
| Pste2g03342 | 603 | FunFam | Lysine--tRNA ligase | 74 | 217 | - | - | |
| Pste2g03342 | 603 | PRINTS | Lysyl-tRNA synthetase signature | 286 | 296 | IPR018149 | GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 | |
| Pste2g03342 | 603 | PRINTS | Lysyl-tRNA synthetase signature | 331 | 344 | IPR018149 | GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 | |
| Pste2g03342 | 603 | PRINTS | Lysyl-tRNA synthetase signature | 302 | 318 | IPR018149 | GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 | |
| Pste2g03342 | 603 | PRINTS | Lysyl-tRNA synthetase signature | 349 | 366 | IPR018149 | GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 | |
| Pste2g03342 | 603 | PRINTS | Lysyl-tRNA synthetase signature | 484 | 500 | IPR018149 | GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 | |
| Pste2g03342 | 603 | FunFam | Lysine--tRNA ligase | 245 | 603 | - | - | |
| Pste2g03342 | 603 | SUPERFAMILY | Nucleic acid-binding proteins | 72 | 216 | IPR012340 | - | |
| Pste2g03342 | 603 | NCBIfam | lysine--tRNA ligase | 241 | 602 | IPR002313 | GO:0004824|GO:0005524|GO:0006430 | |
| Pste2g03342 | 603 | Coils | Coil | 22 | 61 | - | - | |
| Pste2g03342 | 603 | SUPERFAMILY | Class II aaRS and biotin synthetases | 249 | 600 | IPR045864 | - | |
| Pste2g03342 | 603 | MobiDBLite | consensus disorder prediction | 23 | 73 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste2g03342 | Pste-Chr2 | 33460693 | 33473711 | Dispersed |