Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03327 TGGAACTGTGTATCCTTAGAAGGAGCTGATTTAGGGAAGCCAAATTCGTCCAACGAGATATTTCCTTCCACATGTGAAGTAACAGAAACTGAAAGCTACTTCATTGGTTTCAATGCCAACCTTAAAAGTAACGAAACAATCTCACAATCGTATCTAGATGATTCCTCCATCCCTGAGAGAGGTTCTCACTCAATGGGAAACGAATTTATTCTGCATAGAACAAACAAAGAAAAAGGGCTGAAGGTCGAAAAATGGATTGACGAGCTCAAGGAAGAACGTGAAGAAAATGGAGAAGCCGCTTCCAAGTGTTGGGAATGTGTTTGTGCTACAGAAGCAGTACTGGTTGAAAGAATTGTGAAGCCTCTTCATGGTATCAAAGATGTCTCAGTGATAGTCCCTACCCGAACAGTAACTGTGGTCCATGATATTCTCTTGATTTCTGAGTCACAAATAGCTGATGCATTGAATGCTGCAAGGCTTGACGCTAGTTTGAGACTACAAGGAGAGATTGATAATGAAAAGAAATGGCCAGATTTACCTACGATGGTGTGTGGCTTGTTATTGACACTTTCTTTCTTGAAGTATATATATCCCCCTTTGGAATGGTTAGCACTTGGTTCTGTTGTCATTGGCTTCCCTAAAGTTCTACTCAGGGCCATAGCTTCCATTAAGGCTCTTACTCTTAATATCAACATTCTGGTTGTATTGGCAGTGTGTGGTACTGTTGCTTTACAAGATTTTTGGGAGGCAGGAATGATAATCTTCCTATTCTCCATTGCTCAATGGATTGAGACAAGAGCAACTCACAAGGCAGTGGTTGCAATGTCCTTTTTAACAAGCATGGCTCCTCAAAAGGCTGTTATTGCTGAAACTGGGGAACTTATTGACGTCAATGATGTTAAGATCAGCACCATACTTGTGGTCAGGGCTGGCGAAGCTACCCTTGACGGAATCGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAGATGTTAACAGGAGAATCATCACCTGTGATCAAAGAGTTAGACTCAGTAGTATGGGCTGGAACTGTTAATGTGAATGGATATATAAGTGTAAAAACTACTGTGTTGGCAAAAGACACAGTGGTGGCTAGCATGTCAAAACTGATTGAAGAGGCTTCGAGCAGAAAATCTCTAACACAAAGATTCATAGATAATTTTGCAAAGTACTACATTCCTGCTGTTGTGTTGATTTCAGCTAGCATTGCCGTGGTTCCTGCTGCATTAGAAGTTACTGATATTAAGCCTTGGTTTCATCTGGCGATTGTGGTTTTATTGAGTGCATGCCCTTGTGCCCTCATCCTCTCCACACCTGTTGCAATTTTTTGTGCTCTCACCAAAGCTGCAATAACTGTGGCTTTTGATAAAATGGGCAGAATGACAAGAGGAGAGTTCACTGTGACTGATTTTTCTGTTTTAGATGACACTAGCATTGAAACTTTATTGGTTTCAAGTATTGAGAGTAAATCAAGTCATCCTACGGCAGCTGCACTAGTGGAATATGGAATGTCACATTCTATCAACCCAATCCCCGAAAATGTGGAGAACTTTCAAAATTTTCCAGGGGAAGGAGTTTTTGGCACAATTGATGGGAAGGATATCTATGTAGGGAATACGAGCATTGGTGCTAGAGCTGGCACTGAAAAAGTTGATTGTCATATGCAATTTCAAAGCCATGAAATTTCCACCCCGAAACAATACTATAGACCTACTCTGGTTGGAGTCTTCAGCTTAGCTGATTCTTGCAGATCAGGTGTTTTGGAGGCAATAGAAGAGCTAAATTTGTTAGGTGTGAGATCAGTCATGCTAACAGGAGATAGCACTCAAGCTGCTATGTATGTGCAGAGTCAGTTAAACCATACTCTAGACATTGTTCATGCAGAGCTTCTACCAGCGGAAAAGGCTGTGATCATTGAAAATTTCAAGAAAGATGGGCTAACCGCCATGATTGGGGATGGGATGAATGATGCTCCTGCATTAGCATCAGCTGACATTGGTATCTCAATGGGAATATCTGGTTCCGTTGTTGCAAATGAGACAGGCAATGCAATTCTCATGTCAAATGATATCAGAAAAATACCTGAAGCCATTCGTCTGGCAAGAAAAACTACCAGAAAACTCGTTGAGAATGTCATTATTTCAATTGGCTTCAAGATCGCCATACTTGCATTGCCAATTGCAGGACACCCTATAGTTTGGCTTGCTGTGTTGACTGATGTTGGGACCTGTTTACTTACAAACCCAAATATGAAAGAAAATCTACGAGTTCTAAAGTATGGCACCTTCTGGGAAGATATGACCACAACTCTACTTGACAAGAAAAGTAATGTCAATGAGAACCAAGCAATTCTTACTCCTGAAAAGTGTGGTAAAGATTGTTGTAAGAAGGACACTTATTGTGCAGAAACTGCAAGCAAGAATGAATCTTCTGGACTTAAAAAGTTGAGCCCACTAAAAGGAAGCCACGATGGAAACATGGTCTTTGTTGAAGTTCATATAGTGAAACCTTTCGATGGTTGTTGTCTAAACAAAGACAAAATGAGTGAGGACTCCTCATGTAGAACAAAAAACAGTTCTGGTTGTTGCCTAGAGCAATCCAAGACTGAAAACTGTGGCACTGGTTCTGTTGTGACACAAGAAGCCAGCATTGCCACCTTAGAGTCTGATGGTTATGAGGAAATTTCAGAGTTGGATGGGACAAGTGGAATTTCCAAGTGCTGCAAGAACTCATGC 2754 0.4107 WNCVSLEGADLGKPNSSNEIFPSTCEVTETESYFIGFNANLKSNETISQSYLDDSSIPERGSHSMGNEFILHRTNKEKGLKVEKWIDELKEEREENGEAASKCWECVCATEAVLVERIVKPLHGIKDVSVIVPTRTVTVVHDILLISESQIADALNAARLDASLRLQGEIDNEKKWPDLPTMVCGLLLTLSFLKYIYPPLEWLALGSVVIGFPKVLLRAIASIKALTLNINILVVLAVCGTVALQDFWEAGMIIFLFSIAQWIETRATHKAVVAMSFLTSMAPQKAVIAETGELIDVNDVKISTILVVRAGEATLDGIVVEGKCEVDEKMLTGESSPVIKELDSVVWAGTVNVNGYISVKTTVLAKDTVVASMSKLIEEASSRKSLTQRFIDNFAKYYIPAVVLISASIAVVPAALEVTDIKPWFHLAIVVLLSACPCALILSTPVAIFCALTKAAITVAFDKMGRMTRGEFTVTDFSVLDDTSIETLLVSSIESKSSHPTAAALVEYGMSHSINPIPENVENFQNFPGEGVFGTIDGKDIYVGNTSIGARAGTEKVDCHMQFQSHEISTPKQYYRPTLVGVFSLADSCRSGVLEAIEELNLLGVRSVMLTGDSTQAAMYVQSQLNHTLDIVHAELLPAEKAVIIENFKKDGLTAMIGDGMNDAPALASADIGISMGISGSVVANETGNAILMSNDIRKIPEAIRLARKTTRKLVENVIISIGFKIAILALPIAGHPIVWLAVLTDVGTCLLTNPNMKENLRVLKYGTFWEDMTTTLLDKKSNVNENQAILTPEKCGKDCCKKDTYCAETASKNESSGLKKLSPLKGSHDGNMVFVEVHIVKPFDGCCLNKDKMSEDSSCRTKNSSGCCLEQSKTENCGTGSVVTQEASIATLESDGYEEISELDGTSGISKCCKNSC 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03327 918 CDD P-type_ATPase_HM 181 752 - -
Pste2g03327 918 ProSitePatterns Hypothetical cof family signature 2. 657 679 - -
Pste2g03327 918 ProSiteProfiles Heavy-metal-associated domain profile. 96 163 IPR006121 GO:0046872
Pste2g03327 918 SUPERFAMILY HAD-like 458 756 IPR036412 -
Pste2g03327 918 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 106 752 - -
Pste2g03327 918 SUPERFAMILY Calcium ATPase, transmembrane domain M 231 453 IPR023298 -
Pste2g03327 918 Gene3D - 471 589 IPR023299 GO:0000166
Pste2g03327 918 NCBIfam HAD-IC family P-type ATPase 252 731 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g03327 918 Pfam E1-E2 ATPase 289 456 - -
Pste2g03327 918 Coils Coil 75 102 - -
Pste2g03327 918 Gene3D - 105 166 - -
Pste2g03327 918 SUPERFAMILY Calcium ATPase, transduction domain A 293 377 IPR008250 -
Pste2g03327 918 Gene3D - 268 381 - -
Pste2g03327 918 Gene3D - 458 708 IPR023214 -
Pste2g03327 918 Pfam haloacid dehalogenase-like hydrolase 458 671 - -
Pste2g03327 918 SUPERFAMILY HMA, heavy metal-associated domain 107 164 IPR036163 GO:0046872
Pste2g03327 918 PRINTS P-type cation-transporting ATPase superfamily signature 327 341 - -
Pste2g03327 918 PRINTS P-type cation-transporting ATPase superfamily signature 681 693 - -
Pste2g03327 918 PRINTS P-type cation-transporting ATPase superfamily signature 581 592 - -
Pste2g03327 918 PRINTS P-type cation-transporting ATPase superfamily signature 657 676 - -
Pste2g03327 918 PRINTS P-type cation-transporting ATPase superfamily signature 460 474 - -
Pste2g03327 918 PRINTS P-type cation-transporting ATPase superfamily signature 603 613 - -
Pste2g03327 918 NCBIfam cadmium family heavy metal-translocating P-type ATPase 230 756 - -
Pste2g03327 918 FunFam Putative cadmium/zinc-transporting ATPase 3 471 589 - -
Pste2g03327 918 NCBIfam heavy metal translocating P-type ATPase 230 752 IPR027256 GO:0006812|GO:0016020|GO:0019829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03327 Pste-Chr2 33321545 33328723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03327 108 869 Primary Pumps ATPases AT2G19110 50.185 0.0 744