Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03322 GGATCACCAAAGAGGGATCCTCTGCACTTGAGAATTTGGCAAGTTTGTTTGCTCCCTGGCCTCATTGTCATACTTGGCATCTCTGTAGCTTACCTGGATACTGAAGAAATCATGACAATGCAAATCTCAAGTAAAAAGTTCGATCGAGCACCCAGTATTCGTCAGTTATTTCCACCCAAAAATCTTGAGGAAAACAATGGATGTGAAACTAGTTCTCTTCAGTTCATCAACCATCAACATAATACGCCAGAAAGCAGAATCCATCAATGCTATATTTCAAAACCACTTCTTTTGGAAGATGTAGCTACTAGCCCCAGAAATTCTGTATCTTCTATTCCTTCCAATGCCAATGAACATGCTGTATCAATATATCAACTAGTTGATAGGTCAAGTTCTTCTGCTATTTCATCTCTTCAAGGAGATAAAATACCGATGAATCTTCAGATGTATTTACCATTATATAGAGCTGCATTGAGAGGTGATTGGGAGAAGGCCAATGAATTCCTAAATTTGCATCCTGGTGCGGAGAATGCAAGGATTTCAAGAGGGTGGGAAACAGCTCTACATATTTCAGCTGGAGCTCGTCACACCAAATTTGTGGAGAAAATAGTCAAAAGAATGAGAGCTGAAGACTTGGAAATTCAAAATAAAGATAACAATACTGCACTTTGTTTTGCTGCAGCATCTGGGGTTACTAATATAGCAAAGCTAATGGTGGAAAGGAATAGAAACTTACCTGGAATACGAGGTAGTGAAGGGGTGACACCTCTTTACATAGCTACATTACTGGGCCAAAGGGATATGGTTTGGTATCTCTATTCAGTGACTGATCATGAAATTCTAAAAACAGAAGACTACTTTAGCCTACTGATTGCTGCTATATCTACAGATTTATATGATTTTGCCTTACATGTGCTGGAGTGTCGACCACAATTAGCGACTTATCATGGTTTGAATGGGGAGACAGCTTTACACGTGTTGGCCAAAAAACCTTCATCATTTACCAGTGGCATTCAACTAGGAATCTGGGAAAGATGCATCTATCCATGCATTAAAGTCAAACTAACAACTGAGTACAACTGCCAGTCTAACAACTTGCAATCCCAGGCACCTTCAATTTTTCGAGTTGCAGATAACCTATTGGTGACTGGATTCTGTCAGGCTGTAAAATATCTTGTGTCAGGATTAGAAGCAATTCAGAAGAAAAAGACATTGAATGCACAAGCTTTGAAGTTAGTGCAACGTCTTTGGGAACTAATAGTTTCTTCAGATGAAATACAACTTGGAGACTTAATTAAAAGCCCTTTGTCACGACCCCTATTTATTGCTGCTGAAAATGGGATTCCTGAGATAGTAATTGAGCTTCTCTACTCATTTCCAGATCTACTTTGGAAAGTTGACGGCCAAAATAGAAGCCTTTTTCATATTGCTATCATGTTTCGTCAGGAAAAGATATTTAACCTGATTTATGACATAGGGGCACATAAAGATCTGATAACTTCTTACAGAGACAATAATAATCACAACATACTGCATTTGGCTGGAAAATTGGCCCCTTCAGATCAACTTCATGTTGTATCTGGTGCAGCACTTCAGATGCAAAGGGAATTATTGTGGTTCAAGGAGGTGGAAAAAATCATACAGCCTCTATTCAAGGAGATTAAGGATTCTGAAGGTAGAACACCTCAAATGTTATTTACTGAGGAACACAAGGGGTTGGCCAAAGAAGGAGAAAAGTGGCTGAAGAACACTGCTTCATCATGCATGCTAGTCGCAACACTTATTACCACTGTGATGTTTGCAGCAATCTTTACCGTACCGGGTGGGAACAACAACAATAATGGCTATCCTATTTTCATGCACACTATATCTTTTAAAGTTTTTGCTATCTCAGATGCTCTTGCTCTTTTCTCCTCAGTAATATCTGTGTTGATGTTTTTGTCAATACTCACCTCAAGATATGCACAGGAGGATTTCCTTGTGTCACTGCCTAAAAGGTTGAGTGTTGGCATTGCCACCCTTTTCTTCTCCATGATTACAATGCTAATAGCTTTTGGTGCAACATTTTTCATTGTACTTGGTCATCAATTGGCATGGATTGTCATTCCAACAACCCTTGTTGCTTGTATCCCAGCAATATTGTTTGCCTTTTTACAATTTCCTCTTCTTGTTGATACAATCTCATGTACATATGGAGCTGGCGTATTTGCTCGTTGAGGTAGTTAGGTAAATACAATTCAGCCTAAATGATTGGCTAGAGTTTGATTTTTCACTTTGGTTTTTTGGCCTTAGTCCTAAGCTTTCTAACTCTGCTTCTGCTTACATGTGATGAATACTCATGTTCTGGAAATATTCTATAATATACTTAAAAGTGTGGG 2378 0.3881 GSPKRDPLHLRIWQVCLLPGLIVILGISVAYLDTEEIMTMQISSKKFDRAPSIRQLFPPKNLEENNGCETSSLQFINHQHNTPESRIHQCYISKPLLLEDVATSPRNSVSSIPSNANEHAVSIYQLVDRSSSSAISSLQGDKIPMNLQMYLPLYRAALRGDWEKANEFLNLHPGAENARISRGWETALHISAGARHTKFVEKIVKRMRAEDLEIQNKDNNTALCFAAASGVTNIAKLMVERNRNLPGIRGSEGVTPLYIATLLGQRDMVWYLYSVTDHEILKTEDYFSLLIAAISTDLYDFALHVLECRPQLATYHGLNGETALHVLAKKPSSFTSGIQLGIWERCIYPCIKVKLTTEYNCQSNNLQSQAPSIFRVADNLLVTGFCQAVKYLVSGLEAIQKKKTLNAQALKLVQRLWELIVSSDEIQLGDLIKSPLSRPLFIAAENGIPEIVIELLYSFPDLLWKVDGQNRSLFHIAIMFRQEKIFNLIYDIGAHKDLITSYRDNNNHNILHLAGKLAPSDQLHVVSGAALQMQRELLWFKEVEKIIQPLFKEIKDSEGRTPQMLFTEEHKGLAKEGEKWLKNTASSCMLVATLITTVMFAAIFTVPGGNNNNNGYPIFMHTISFKVFAISDALALFSSVISVLMFLSILTSRYAQEDFLVSLPKRLSVGIATLFFSMITMLIAFGATFFIVLGHQLAWIVIPTTLVACIPAILFAFLQFPLLVDTISCTYGAGVFAR 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03322 738 PANTHER CASKIN 181 732 - -
Pste2g03322 738 SUPERFAMILY Ankyrin repeat 152 515 IPR036770 -
Pste2g03322 738 FunFam Ankyrin repeat-containing protein ITN1 isoform C 145 357 - -
Pste2g03322 738 FunFam Ankyrin repeat-containing protein ITN1 isoform C 403 575 - -
Pste2g03322 738 Gene3D - 402 569 IPR036770 -
Pste2g03322 738 Pfam Domain of unknown function 578 691 IPR026961 -
Pste2g03322 738 SMART ANK_2a 469 498 IPR002110 GO:0005515
Pste2g03322 738 SMART ANK_2a 435 464 IPR002110 GO:0005515
Pste2g03322 738 SMART ANK_2a 252 282 IPR002110 GO:0005515
Pste2g03322 738 SMART ANK_2a 148 177 IPR002110 GO:0005515
Pste2g03322 738 SMART ANK_2a 218 247 IPR002110 GO:0005515
Pste2g03322 738 SMART ANK_2a 183 214 IPR002110 GO:0005515
Pste2g03322 738 Gene3D - 145 376 IPR036770 -
Pste2g03322 738 Pfam Ankyrin repeats (3 copies) 213 273 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03322 Pste-Chr2 33267598 33272255 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03322 186 723 Miscellaneous Gene Families AT5G54710 22.026 1.72e-17 84.7