Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03311 ATGGATTTTTAATTTTATGGATATTTTGGATCCAAGGTTTGGACCACCCAATGTGAATGAAGCACAGGACACTGAAATTGTAAATGGAGGGTGTGCAAAAGATGAAGCTGAAATGGAAAGTGAAAATGTGAGGATTAATATGATAGATGATGTACCAAGTTTTACTTTGATAGTAGACAGTGCAATAAGGAGTGAGACTGGGTCAATTTTGGGAGAATCACGTATCCAAAGTTTTACTTCCATAGTGGACAACGCAATAAGGAGTGAAACTGTGTCTATTTTTGGAGAATCCCGTGTCCCCAGTTTTGCTTCAACAGATGACAATGTCTTGAAGGCTATTCCAGCACGATTACTGAGCCGAACAAAGCTTGAAGCAGCGGCCAATACTTTCTCACGTCCCAACAGAGGCCATGGCAACACTGGAGGAGTTGCTGCCCGGTTGTTTTCTGCCCCTGCAATTGCAATTGCTAATTGGCGAAGAAGGAAACTTAATCAGGATGCTTTCTTTGATGTTGCTGCTGAGGAAGATCCTCAAGTTCACTTTGGTCACCTTCATAGGTTTTCTCTGCGTCAGCTGCAAGTAGCAACAGATTACTTTAGTAGCAAAAACATTTTGGGTAAAGGACGATTTGGAAAGGTTTATAAAGGACGCTTAGCTGATGGATCTCTTGTTGCAGTAAAAAGACTTACAGAGGAACGAACGCACGGTGGGGAGCTGCAATTTCAAACTGAAATAGAAATTATCAGCATGGCTCTGCATCGTAATTTGCTTCGTCTTCGTGGTTTTTGTATGACACCTACTGAACGATTACTTGTGTATCCTCTCATGGTCAATGGAAGCCTAGATTCATGTTTACGAGAACGTCAAGAATCTCAACTACCACTTGGTTGGTCAGAACGGAAGCGTATTGCATTGGGATCTGCAAGAGGGCTTGCTTATTTGCATGATCATTGTGACCCTAAGATTATTCATCGTGATGTCAAAGCAGCAAATATATTGTTAGACGAGGATTTTGAAGCAGTTATTGGAGATTTTGGTTTAGCAAAACTTATGGATTATAAAGATACTCATGTTACTACTGCTGTACGTGGAACACTGGGGCATATAGCACCAGAGTACCTCTCCACTGGAAAGTGTTCAGAGAAGAGTGATGTGTATGGATATGGTATGCTGCTTCTTGAACTAATAACTGGGCAAAGGGCTTTTAATCTAGCTCGACTTGCTAGAAATGAAGATATGATGTTGCTTGGTTGGGTCAAAGTACTTCTCAAAGACAAAAAATTGAAGACAGTGGTAGATGTAGATTTAGGGGACAATTATAATGAGGAGGAGGCAGAGCAGTTAATCCAAATTTCCTTATTATGCACACAAAGCTCTCCTATGGAAAGACCAAAGATGGCTGAAGTGATCAGAATGCTAGAAGGTGATGGGTTGGCTGAGAAATGGGAGCAATGGCAAAAAGACGAGACATTTCTTCAAGACTCTAGCAACATGATGCACATTAATGTACCTTCGGAACTAGATTCAACTTCAGATATGGAGGAGGTCACTGCCATTGAAGCTAACATGTGGACTGCTGACACTGTTTATTGGTTGCCGATTTCTTCGCTGACTATCCTGGTCGGCTTAAAAGGTTCTCTGCGTGAGAGCTGCAACGTGCAACGTGCAACACATAACTTTAGTCGCAAAAACTTCATTGGTAGAGTAAAAAGACTTGAATGGGAACCCACGCAGGTTGAGGAGTACATATTTCGAATTGAAATCGAGATTATCAACATGCCTCTGCATCAACGTCAAGAATCTCAACCACCACTTGGCTGGTCACAACGAGAGCGTATTGCACTGAGGTCTGCAAGAGGGCTTATTTGCATGATCGTTGTGAACCTAAGATTCTTCATCGTAATGTTAAAGCAACAAATAATATATTTGGACAACGAATTTGAAGTCGTTATTGGGGAATTTGGTTTAGCAAAACTTAAGAATCTTAATGATACTCATCTTACCATACTGCTGCACGTGGAACAGTTGTCTCTCAACTAGCTTCTTGAACTAATAAGTGGACAAAGGGCTTTTGATCTAGCTCGACATGATGTTGTTTAATTGGGTAGGTATTCAGCTTACTCTAAATATGTCATTAATACTCTAACCATGTTGTCTGTTAATATCTGTATATAGTTCAACATACTTAATACATTTTTTAGCTTATGAAA 2211 0.4048 MDILDPRFGPPNVNEAQDTEIVNGGCAKDEAEMESENVRINMIDDVPSFTLIVDSAIRSETGSILGESRIQSFTSIVDNAIRSETVSIFGESRVPSFASTDDNVLKAIPARLLSRTKLEAAANTFSRPNRGHGNTGGVAARLFSAPAIAIANWRRRKLNQDAFFDVAAEEDPQVHFGHLHRFSLRQLQVATDYFSSKNILGKGRFGKVYKGRLADGSLVAVKRLTEERTHGGELQFQTEIEIISMALHRNLLRLRGFCMTPTERLLVYPLMVNGSLDSCLRERQESQLPLGWSERKRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEDFEAVIGDFGLAKLMDYKDTHVTTAVRGTLGHIAPEYLSTGKCSEKSDVYGYGMLLLELITGQRAFNLARLARNEDMMLLGWVKVLLKDKKLKTVVDVDLGDNYNEEEAEQLIQISLLCTQSSPMERPKMAEVIRMLEGDGLAEKWEQWQKDETFLQDSSNMMHINVPSELDSTSDMEEVTAIEANMWTADTVYWLPISSLTILVGLKGSLRESCNVQRATHNFSRKNFIGRVKRLEWEPTQVEEYIFRIEIEIINMPLHQRQESQPPLGWSQRERIALRSARGLICMIVVNLRFFIVMLKQQIIYLDNEFEVVIGEFGLAKLKNLNDTHLTILLHVEQLSLN 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03311 674 Gene3D Transferase(Phosphotransferase) domain 1 271 488 - -
Pste2g03311 674 Gene3D Transferase(Phosphotransferase) domain 1 586 669 - -
Pste2g03311 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Pste2g03311 674 Gene3D Phosphorylase Kinase; domain 1 163 269 - -
Pste2g03311 674 FunFam Somatic embryogenesis receptor-like kinase 1 271 488 - -
Pste2g03311 674 ProSitePatterns Protein kinases ATP-binding region signature. 200 222 IPR017441 GO:0005524
Pste2g03311 674 ProSiteProfiles Protein kinase domain profile. 194 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03311 674 SUPERFAMILY Protein kinase-like (PK-like) 174 469 IPR011009 -
Pste2g03311 674 SUPERFAMILY Protein kinase-like (PK-like) 565 662 IPR011009 -
Pste2g03311 674 SMART serkin_6 194 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03311 674 FunFam Somatic embryogenesis receptor kinase 1 163 270 - -
Pste2g03311 674 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 118 479 - -
Pste2g03311 674 Pfam Protein kinase domain 195 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03311 Pste-Chr2 33133709 33141634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03311 541 663 Receptor kinase-like Gene Family AT4G33430 36.571 1.17e-17 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pste2g03311 Pkinase 9.9e-46 CL0016