Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03295 GGGAGGCCTCAATGTCTTTGGGAAGATGCAATTTTAACTGCCATGTCAACTCATGCTAATATGTCTTTAGTTAGATCTGCTGATCTAGCTCCTGCATCATATGAAAATGCTAAGCTCTTCTCACTAAAGGGAGCTGATGTTAGACCTGGCTTGTCCTCTCAAATTTTTGGTCCTGATAAGCATAGAAATATGTACACCACAGATACTTCCTCCAGCGAGAGTTATGAGAAGTACTTCCATGACTCACAAACAGAAGAACAGATAGAACCATCTAGCTCCAGCATCTCTGAAAGTTCAATTCAGCCTGATGTAGCCTCCTCTTACCAGCTCAGAGCCAGTTCAGGAGCTTCTATGGTTGCTAATAACCCATTTGATGCTTATCAGTCCATCTCTGGATCAGATTTGATGGAGAATGGAAGCCTGGATTCACGCAACAATGATGTTCTAATGAGATTAAAACTACAAGCGTTGGAGAGGGCATTGCTTGATGACAGTGATGCTGAGAAGGAGGAGGAGGAGGAAGAGGAAGACATATTTGAGGTTGTTCAAAGCATGGAAATAGATCCTTACATTGCTGAGTGGGCTGATTCCATGCAGAATATGCTGCTCCATGATTCACCAAAGGAGTACTCGTCTTCAGATTCCAATATTAGCAGCATCAGCAGCACCAAACAAATATCACAAACTTCTAGGTCCCCCAAGCAGTTGCTTTATCAATGTGCTATTGCACTTTCTGAAGGAAATGAAGAGGAAGGGTCATCTATGATAAACAATCTCCGGCAGATGGTCTCAATTCAGGGAGAGCCGTCTCAAAGAATTGCAGCCTATATGGTTGAGGGACTTGCAGCTCGCCTAGCTGAATCTGGCAAAAGTATTTACAAAGCTCTGAGATGCAAGGAGCCTCCCTCTTCTGACCGTCTAGCAGCCATGCAGATACTGTTTGAGGTTTGCCCATGTTTCAAATTTGGATTTGTTGCTGCTAACGGTGCCATTACAGAAGCAGTGAAAGATGACACGAAGATTCATATAATAGATTTTGACATCAATCAAGGAAGTCAGTACATAAATCTAATCCAAACACTTGCTTCAAGATCAAGTAAGCCACCCCATGTTAGGTTGACTGGAGTTGATGATCCTGAGTCTGTGCAGCGATCAGTTGGAGGCCTCCAGATCATAGGACAAAGACTAGAAAAACTGGCAGAGGCACTTGGTTTGTCATTTGAGTTTCGAGCTGTGGCTTCAAGGACTTCAATTGTCACCCCATCAATGTTCAACTGTAGTCCTGGTGAAGCACTAGTTGTGAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGTGTTTCAACAGTAAACGAACGGGACCAACTTCTTCGCTTGGTGAAGAGCTTGAATCCAAAGCTTGTGACAGTGGTGGAGCAAGATGTGAACACAAACACCACCCCCTTCTTACCTAGATTTGTTGAAGCATACAATTATTACTCTGCCGTGTTTGAGTCACTAGATGTTACTCTTCCCAGAGAAAGTCAAGACAGGATGAACGTTGAAAGGCAATGCTTAGCAAGGGACATTGTCAATGTTGTTGCATGTGAGGGCGAGGATAGGATAGAAAGGTATGAAGTTGCAGGAAAATGGAGAGCAAGGATGACAATGGCTGGCTTCACTGCATCCCCGATGAGCACAAATGTGACTGAGGAAATCCGAAAACTCATTAAGGTGATGTATTGCGACAGGTACAAGATAAAGGAGGAAATGGATGCACTTCATTTTGGTTGGGAAGACAAAAACTTGATTGTTGCTTCAGCATGGAAGTTACCAAGATAATTATGTTAGGCGACAAACTTAATCAGTATTGGGTAATGTAGTCTTTGCTTGCTTGCTTAGGTTGTAGATTATTTCTGATATTCTTGTTGTACTTTGCATCTTAAGCTTATAACGAATTTTCTTTATGTAAGTGCTTTGCTTAACGGGGCCGGCTCTATAAATATTTTCTAATTTGATCATTCGCAAAAATAAG 2017 0.4239 GRPQCLWEDAILTAMSTHANMSLVRSADLAPASYENAKLFSLKGADVRPGLSSQIFGPDKHRNMYTTDTSSSESYEKYFHDSQTEEQIEPSSSSISESSIQPDVASSYQLRASSGASMVANNPFDAYQSISGSDLMENGSLDSRNNDVLMRLKLQALERALLDDSDAEKEEEEEEEDIFEVVQSMEIDPYIAEWADSMQNMLLHDSPKEYSSSDSNISSISSTKQISQTSRSPKQLLYQCAIALSEGNEEEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFVAANGAITEAVKDDTKIHIIDFDINQGSQYINLIQTLASRSSKPPHVRLTGVDDPESVQRSVGGLQIIGQRLEKLAEALGLSFEFRAVASRTSIVTPSMFNCSPGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTASPMSTNVTEEIRKLIKVMYCDRYKIKEEMDALHFGWEDKNLIVASAWKLPR 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03295 607 MobiDBLite consensus disorder prediction 205 228 - -
Pste2g03295 607 Coils Coil 154 177 - -
Pste2g03295 607 ProSiteProfiles GRAS family profile. 224 604 IPR005202 -
Pste2g03295 607 Pfam GRAS domain family 234 604 IPR005202 -
Pste2g03295 607 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 202 599 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03295 Pste-Chr2 32905441 32908125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03295 21 604 GRAS Transcription Factor Family AT1G21450 61.037 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste2g03295 GRAS 1.3e-135 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03295 2 32905441 32908125 Pste2g03295 2 32905441 32908125 ECH