Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03294 AACAAAAGTGACTTACCATCCACAACCCTAAACCAACCCCTCCCTCTCCACTTATATATCTTGTTCGAGACTTCTCTTCTGTGTGCTTGATGTTCAAGATTTCTCGCCGCTAGCTTCACCATAATATCGCTACCCTGAGCCTGCATCCACTGTACGTAACAGTACCCTTTCATTCCATGGAGGATTCTTCAGCTGGTGAAGACACCAAGACTTGTCCCCGTGGCCACTGGAGACCCGCTGAAGATGAAAAGCTTAGACAACTTGTTGAACAATATGGTGCCCAAAACTGGAATTCAATTGCTGAGAAGCTCCAAGGAAGATCGGGGAAAAGTTGCAGATTAAGGTGGTTCAATCAGCTTGACCCAAGAATCAACAGAAGACCATTCACGGAAGAGGAAGAAGAGAGGTTGCTGGCAGCTCATCGCATTCACGGGAACAAGTGGGCACTCATAGCGAGGCTTTTTCCCGGTAGAACGGATAATGCTGTGAAGAACCATTGGCACGTTATAATGGCGAGAAAGCAAAGGGAACAGTCTAAGTTATGTGGGAAGAGAAGTTTCCAAGATGTTTACAACGATTCCACCACGTTCCTTGAAAAGAACACCACAATCTCATCAAGACCTATTAATGGAAGATTCTTTGACTTTCGAAGTCTCGATAATCATAAAGATAATAATAATAATAATAGGATAGTTGCAGATACTCCCTCTAGTTCTCTGGCTTCTTGGAATTTTGCTTCTGCGCCAACCACCACAAACGGTTCTACTGTAGTGGATAGAAAAGGAGGGAGGGACTATTTCAACACTTCTTGCTCTTCTAGTGTTTATCTCTCGGAATGTTCCAGAAGCTCAGATAGATCTTTTCTTTACAGAATTTATCCAAATCCTGCATTCTCTCTTCCCAACTACAAGAGAGTTGTTCCAAGTCCTTTTAGTTTCCATGGTTCTTCTGATGATGGAAGGATAAAGAAGGACTTGATGAGTTTCTGTGATAACAACTCATCCACATTCACCAAGTTGAAGGCTTCCACGGACAAAGATCATCAACAAACAAATGAAGATGAGACCAATATCGAGCTCAAAGAAGTTCCTTTTATTGATTTTCTTGGTGTGGGTGTTTCTTCATCGTAA 1130 0.4248 MEDSSAGEDTKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDVYNDSTTFLEKNTTISSRPINGRFFDFRSLDNHKDNNNNNRIVADTPSSSLASWNFASAPTTTNGSTVVDRKGGRDYFNTSCSSSVYLSECSRSSDRSFLYRIYPNPAFSLPNYKRVVPSPFSFHGSSDDGRIKKDLMSFCDNNSSTFTKLKASTDKDHQQTNEDETNIELKEVPFIDFLGVGVSSS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03294 317 Gene3D - 69 129 - -
Pste2g03294 317 CDD SANT 18 59 IPR001005 -
Pste2g03294 317 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste2g03294 317 SMART sant 14 63 IPR001005 -
Pste2g03294 317 SMART sant 66 114 IPR001005 -
Pste2g03294 317 FunFam MYB transcription factor 68 138 - -
Pste2g03294 317 SUPERFAMILY Homeodomain-like 14 108 IPR009057 -
Pste2g03294 317 Gene3D - 15 66 - -
Pste2g03294 317 ProSiteProfiles Myb-like domain profile. 15 61 IPR001005 -
Pste2g03294 317 PANTHER MYB PROTEIN-RELATED 15 198 - -
Pste2g03294 317 MobiDBLite consensus disorder prediction 1 21 - -
Pste2g03294 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 61 IPR017930 -
Pste2g03294 317 FunFam MYB transcription factor 15 66 - -
Pste2g03294 317 CDD SANT 69 109 IPR001005 -
Pste2g03294 317 Pfam Myb-like DNA-binding domain 18 78 - -
Pste2g03294 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03294 Pste-Chr2 32842243 32843705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03294 12 122 MYB Transcription Factor Family AT1G17950 83.784 1.19e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste2g03294 Myb_DNA-bind_6 2.2e-17 CL0123