Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03251 ACGATGCTTTCCAAGCAGCAATGACTTTATCACGAGATAATACCAAAGTTGTGCTACTTACTTGGTTTCTAGTAATGATCACAGCAATGTCACAAACAATTCATCCTAGCTGCCAAAAAAAATGTGGAAATGTTAACATTCCGTACCCATTTGGTACAACTGAGAACTGCTACTTGAACAGCAACTTTTATATTGCTTGCAACACAAGTCACACCCCTCCCACACCATTTTTGTGGAATGTGACAAAAAATATTGAGATCTTAGACTTGTCATTGAATGGCCATTTGCGGATAAAATCTCCTGTAGCTTATGTCTGCTATGATGAAAAGGGCGTGCTAGTGGATTCAGGGAATTCATCTATGACCTTGCAAGCATTCCCCTTTTCATATACCCGGAACAAATTCATTGGAATTGGATGCGACACCCTTTCAACCATCAATGCAACAATTGGGACAAACTACTCAGCTGGAGGGTGTTTTTCAATCTGTAGTAGTGTAGAAAGTTTTACCAATGGATCCTGGTTTGGTATTGGTTTCTGTCAAACCTCTATCCCGAAAAACATTTTGGCATATGAAGCTCGTGTCCTGAGATCAAATTTGATGCTTAGGGATATGGATATTCGGTGTAGCTACTCTCTTTTGGTGGAAGAAGATTCTTTCAAGTTTTCCACTGATGACTTCATCAAACTGCAGAACAGAAAAACCGCTCTCACAGTGCTTGATTGGGCTGTTGGGAATCAAACGTGTGAAGAAGCTAAGAAGAATTTGACTAGTTATGTGTGCAAAGGAAATAGCGTATGTATTGACTCCGACAATGGACCAGGGTACCTTTGCAGATGCTTAGAAGGTTATGTGGGAAATGCATACCTTCATGGTGGATGCCAAGATATTGATGAGTGTGCATATCCGAGTCTAAATGACTGTTCAGATATTTGCATTAACCTACCTGGGAGCTATAATTGTTCTTGTCCCAAGACCAAGAGGTACGAGGGAGATGGCAGAAAAGGAGGAAGTGGCTGTGTCTCGAATCTACAACATGTGGTTAATCAGGTTGTTATAGGCGCTGGCATAGGCCTTATGTTGCTGTTAATTGGTAGTGGCTGGCTATATCATGTGTTGCGAAAAAGAAAAAGGGTAAGGCTCACAGAAAGATATTTCAAGCGAAACGGTGGCTTAATGTTACAGCAGCAAATTTCAAACATGGAAGGATCATCTGAGAGAGCCAAAATTTTCACTGCTAGAGAGCTAAGGAAAGCTACTGAAAATTTTCACGAGAGCAGAATCATTGGCAGAGGAGGATATGGTACAGTTTATAAGGGAATACTCCCAAATGACCAAGTAGTTGCTATAAAGAAATCAAAACTAGTAGACCACAGCCAAATTGAACAATTCATCAACGAAGTGGTTGTACTGTCCCAAATTAACCACAGGAATGTTGTCAAACTCCTAGGTTGCTGCCTAGAGACAGAAATGCCACAACTGGTTTATGAATTTGTTAATAATGGCACCCTCTTTGACCACATTCACAATGAAAAGACCACACTTCCCTGGGAAACACGTCTAAAAATAGCAGCAGAAACAGCTGGTGTTCTTGCATACTTACATTCTGCTGCTTCCATACCAATCATCCATAGGGACTTCAAGTCAACTAACATACTCTTAGATGACAAATACACAGCTAAGGTTTCTGACTTTGGAACCTCAAGATTGGTTCCGCGTGACAAGTGTCAATTGACAACATTGGTTCAGGGAACTCTTGGGTACCTTGACCCAGAATACTTTCAGAGTAGCCAACTAACTGAGAAAAGCGATGTGTATAGCTTTGGTGTTGTAGTTGCAGAGTTGCTAACAGGAAGAAGGGCACTTTCTTTTGACATGCCAGAGGAGGAGAGGAATTTGGCCTTCTTGTTCGAAATTGTTGAGGATTGTGTAAGTGAGGGAAATAGTGAGCAGGTGAAGGAAGTTGCTAATATTGCTCAATGGTGCTTGAGACTTAAAGGTGAGGAAAGACCTACCATGAAGGAAGTGGCCATGGAATTGGATAGTCTAAGAATGATGACAACAGCTACATGGATTAATGCCCCATCAAATACAACAGAACATGTGATTGGTGAAACATCAGGTCCAACACGTGCTGGACCTGGACCAGAGGATGACACCATTTGCAACGATGTGATGTCACCGTTATGGGAT 2192 0.4147 MTLSRDNTKVVLLTWFLVMITAMSQTIHPSCQKKCGNVNIPYPFGTTENCYLNSNFYIACNTSHTPPTPFLWNVTKNIEILDLSLNGHLRIKSPVAYVCYDEKGVLVDSGNSSMTLQAFPFSYTRNKFIGIGCDTLSTINATIGTNYSAGGCFSICSSVESFTNGSWFGIGFCQTSIPKNILAYEARVLRSNLMLRDMDIRCSYSLLVEEDSFKFSTDDFIKLQNRKTALTVLDWAVGNQTCEEAKKNLTSYVCKGNSVCIDSDNGPGYLCRCLEGYVGNAYLHGGCQDIDECAYPSLNDCSDICINLPGSYNCSCPKTKRYEGDGRKGGSGCVSNLQHVVNQVVIGAGIGLMLLLIGSGWLYHVLRKRKRVRLTERYFKRNGGLMLQQQISNMEGSSERAKIFTARELRKATENFHESRIIGRGGYGTVYKGILPNDQVVAIKKSKLVDHSQIEQFINEVVVLSQINHRNVVKLLGCCLETEMPQLVYEFVNNGTLFDHIHNEKTTLPWETRLKIAAETAGVLAYLHSAASIPIIHRDFKSTNILLDDKYTAKVSDFGTSRLVPRDKCQLTTLVQGTLGYLDPEYFQSSQLTEKSDVYSFGVVVAELLTGRRALSFDMPEEERNLAFLFEIVEDCVSEGNSEQVKEVANIAQWCLRLKGEERPTMKEVAMELDSLRMMTTATWINAPSNTTEHVIGETSGPTRAGPGPEDDTICNDVMSPLWD 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03251 724 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524
Pste2g03251 724 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 24 678 IPR045274 GO:0007166
Pste2g03251 724 SUPERFAMILY EGF/Laminin 288 325 - -
Pste2g03251 724 CDD EGF_CA 289 317 - -
Pste2g03251 724 Pfam Wall-associated receptor kinase galacturonan-binding 31 88 IPR025287 GO:0030247
Pste2g03251 724 ProSitePatterns Calcium-binding EGF-like domain signature. 289 314 IPR018097 GO:0005509
Pste2g03251 724 Gene3D Transferase(Phosphotransferase) domain 1 492 693 - -
Pste2g03251 724 MobiDBLite consensus disorder prediction 692 714 - -
Pste2g03251 724 SUPERFAMILY Protein kinase-like (PK-like) 402 685 IPR011009 -
Pste2g03251 724 SMART egf_5 241 288 IPR000742 -
Pste2g03251 724 SMART egf_5 292 334 IPR000742 -
Pste2g03251 724 FunFam Wall-associated receptor kinase 2 492 696 - -
Pste2g03251 724 ProSiteProfiles Protein kinase domain profile. 416 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03251 724 Gene3D Laminin 293 329 - -
Pste2g03251 724 Pfam Protein kinase domain 416 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03251 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Pste2g03251 724 CDD STKc_IRAK 422 676 - -
Pste2g03251 724 FunFam Wall-associated receptor kinase 2 386 491 - -
Pste2g03251 724 FunFam Wall-associated receptor kinase 2 240 291 - -
Pste2g03251 724 Gene3D Laminin 239 292 - -
Pste2g03251 724 Gene3D Phosphorylase Kinase; domain 1 381 491 - -
Pste2g03251 724 SMART egfca_6 289 334 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03251 Pste-Chr2 32424981 32427786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03251 15 697 Receptor kinase-like Gene Family AT1G21250 44.444 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste2g03251 Pkinase 1.2e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g02009 8 16054149 16058922 Pste2g03251 2 32424981 32427786 PCT