Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03235 ATGACAGAAGAAACAATGAGGATTTCAACACTTGCAATTGTTCTCCTCTTGTGTTTTTCTTATGTACTTATTTGTCATGGCGATGATTTAGACAGTGAGAGCACGTTAAGTGTGCTGTTGGAGGTAAAATCATCTTTCACCCACGACCCAGAAAATGTTTTAAGGGATTGGTCAAAGAACAATACAGATTACTGTAATTGGAGAGGGGTGTCATGTGGACCTCTGGATGAAGCTGACTCGGTGCACCAAGTGGTGGGACTCAACCTGTCCGACTCATTACTCAGTGGGTCAATATCACCCTCACTCGGTCGTTTGCAAAGTCTGCTCTTCCTTGATCTCTCTTCTAACCGCCTAAAGGGTCCCATTCCTCCTACCCTCTTCGACCTTACTTCATTGGAATCTCTCTTTTTGCACTCTAACAACCTCACGGGTCCCATCCCTCCCGAATTTGCCTCGCTACTGAGTCTCCGAGTTTTGCGAATTGGTAACAATGAGCTCACTGGCACGATTCCGGAGTCATTTGGGTTTCTGGTCAACCTTGAGTACCTTGGTTTAGCTTCATGCAGACTCACTGGTCCCATTCCACCACAACTCGGTCTACTCAGTATGTTGGAATATCTTATTCTGCAGGATAACGAGTTGAGTGGGCCTATTCCTTCCGAGTTGTGGGACTGCTGGAGCCTTGTAGTCTTCACCGCCGCTGGCAACAGTCTCAATGGTTCGGTCCCGAATAAACTGAGTCGACTCGGGAAACTTCAAACTCTGAACCTCTCCAACAACAGCTTAACCGGGTCGATTCCGAGTCAACTCGCCGAGCTGAGTGAGCTTAGATATCTGAATTTGATGGATAACAAGCTTGAGGGTCGTATTCCACCGTCTTTAGCTCAATTGGGTAACCTTCAAAATCTTGACTTGTCCAACAATACGCTCAGTGGGGAAATTCCTGAGGAGTTGGGGAACATGGGTCAGTTAAAATACTTGGTTCTCTCTGGGAACAAATTTTCTGGGACCATTCCAAGAACCATATGTTCCAATGCAACAAGTTTGGAGAACTTGATAATGAGAAGTAGTGGACTTCATGGTGAGATACCAGCTGAGTTGGGTAAGTGCCAATCACTGAAACAACTTGATTTGTCTAACAATTCTCTTACTGGGTCAATACCTATTGAGGTTTATGGGTTGCTGGGATTAACTGAACTCTTGCTTCACAATAACACTTTGGTTGGTTCAATCTCCCCCTTCATAGGCAACCTCACTAACATGCAAGCACTTGCATTGTATCACAACCAATTGCAGGGTGGTCTCCCCAGAGAGATTGGGAGGCTTGGAAAATTGGAAATAATGTTTCTCTATGATAATAACTTGTCAGGGAACATTCCTTTGGAGATTGGAAACTGTTCAAGGTTGCAAATGGTTGACTTATTTAGAAACCATTTCAGTGGGGGAATTCCCTTCACTATTGGGAGGCTGAAAGATTTGAATTTTTTGCATCTTAGGCAGAATGAGCTTGTTGGTAACATTCCTGCCACACTTGGGAACTGCCATAAACTGAATGTGCTGGATTTGGCAGTTAATCGGCTCTCAGGTGGCATTCCTGCAACGTTTGGGTTCCTTAGAGAGCTGAATCAGTTCTTGCTCTACAACAATCTTCTTGAAGGTAGTCTTCCTCATCAACTTGTAAATGTAGCAAACCTGACCAGAGTCAATCTTTCAGGCAACAGGCTGAATGGTAGTTTGGCTGCATTGTGTAGCTCTAGGTCCTTTCTTTCTTTTGATGTCACAGATAATGTATTTGATGGTGAAATACCCTTTATGCTGGGAAATTCACCTTCCCTTGAGAGGCTGAGACTAGGTAACAACAAGTTTTCAGGTGAAATTCCAAGGACATTGGGAAAAATCACTATGTTATCTTTGTTAGACCTCTCAAGAAATTCACTCACAGGACCAATACCAGATGAGCTTTCTTTGTGTAACAATCTCACTCACATTGATTTAAACAATAATCTTCTATCTGGACACATACCATCATGGCTTGGAAGTTTGATCCAGTTGGGAGAGCTTGAGCTTTCCTTCAATCAATTTTCTGGGTCTATTCCACTTGGGCTATTCAAACAGTCTAATTTGTTGGTTCTTTCCTTGAATAACAATTCTCTTAATGGAAGTCTCCCAGCTGATATTGGTGGTCTGGCATCTCTTAATATCCTCAGGCTTGACCATAATAAGTTCTCTGGGTCAATCCCTCACGCAATTGGTAAATTGAGCAATATTTTTGAGCTGCAGCTTTCTGGGAATGACTTTAGTGGTGAAATACCAATTGAGATTGGAAGTCTTCAAAATCTTCAAAGCATTTTGGATCTCAGTTACAATAATATCTCTGGTAATATCCCATCTTCACTTGTCATGCTGTCAAAATTGGAAGTACTTGATCTTTCTCATAATCAACTCACTGGAGAAGTGCCTTCAGCAGTTGGTGAAATGACTAGCTTGCAGAAGCTCGATATCTCTTACAATAAGCTTCAAGGTGCATTGGATAACCAATTCTCCCGGTGGCCACACAAGGCCTTTGAAGGGAACCTCCATCTTTGTGGGGCCTCTCTTGGAAGCTGCGACAGTGATGGTGCATCTAGCAATAAACGTTTAGTTTTAAGCAGAAAATCATTGGTTATAGTCTCAGTACTTTCAACTTTAGCTGTCATTGCTCTACTAGTACTTGCAGTAATCATCTTCAAAAACAAGCAAGAATTTTTCAGGAAAGGCAGTGAATTGAGTTTTGTTTTCTCCTCTTCATCGCGGGCCCAAAAACGACCATTGATCCCTATAACCATGCCTGGAAAGCGAGAGTTCAGGTGGGAAGATATCATGGATGCCACAAACAATCTGAGTGATGAGTTCATAATTGGTTGTGGAGGTTCTGGGACAGTGTACAGAGTTGAATTGCCCACTGGAGAGACTCTGGCTGTCAAGAAGATTTCATGGAAAGATGATTATCTGTTGCACAAAAGCTTTATTAGAGAACTTAAGACTTTAGGGAGGATCAAGCATAGGCATCTGGTGAAATTGATAGGTTGTTGTAGCAATAGAAATAACGGAGGAGGTTGGAATCTGTTGATATATGAGTATATGGAGAATGGGAGCGTTTGGGATTGGCTACATGGCCAGCCCCTGAAAGCAAAAGGGAGACTTGATTGGGACACAAGGTTCAAAATTGCTGTGGGATTAGCTCATGGTGTGGAATACCTCCATCATGATTGTGTTCCAAAGATCATTCACAGAGATATCAAATCCAGCAACGTATTGCTAGATTCCAACATGGAGGCACACTTGGGAGACTTTGGACTGGCAAAATCACTCCTTGAGAATCATGAATCTAATACCGACATTGGAATTGTGCTTATGGAACTTGTGAGTGGTAAATTGCCAACAGATGCAGCTTTCAGAGGAGGGATAGACATGGTGAGATGGGTGAAGATGCACGTTGAAATGCAGGGTAATGAAGTTGATGAAGTGATAGATCCTCATATGAAACCCCTTTTGCCTGGTGAAGAGTTTGCTGCGTTCCAGGTTCTTGAGATAGCCGTACAGTGCACAAAAACTGCACCACAAGAGAGACCAACGGGACGCCAAGTGTGCGATTTTCTTCTGCGTGTATCCGACAACAAAATTCTCGAGTTTGAGAAGACAAATCTCGATCACTGCTACTGA 3702 0.4295 MTEETMRISTLAIVLLLCFSYVLICHGDDLDSESTLSVLLEVKSSFTHDPENVLRDWSKNNTDYCNWRGVSCGPLDEADSVHQVVGLNLSDSLLSGSISPSLGRLQSLLFLDLSSNRLKGPIPPTLFDLTSLESLFLHSNNLTGPIPPEFASLLSLRVLRIGNNELTGTIPESFGFLVNLEYLGLASCRLTGPIPPQLGLLSMLEYLILQDNELSGPIPSELWDCWSLVVFTAAGNSLNGSVPNKLSRLGKLQTLNLSNNSLTGSIPSQLAELSELRYLNLMDNKLEGRIPPSLAQLGNLQNLDLSNNTLSGEIPEELGNMGQLKYLVLSGNKFSGTIPRTICSNATSLENLIMRSSGLHGEIPAELGKCQSLKQLDLSNNSLTGSIPIEVYGLLGLTELLLHNNTLVGSISPFIGNLTNMQALALYHNQLQGGLPREIGRLGKLEIMFLYDNNLSGNIPLEIGNCSRLQMVDLFRNHFSGGIPFTIGRLKDLNFLHLRQNELVGNIPATLGNCHKLNVLDLAVNRLSGGIPATFGFLRELNQFLLYNNLLEGSLPHQLVNVANLTRVNLSGNRLNGSLAALCSSRSFLSFDVTDNVFDGEIPFMLGNSPSLERLRLGNNKFSGEIPRTLGKITMLSLLDLSRNSLTGPIPDELSLCNNLTHIDLNNNLLSGHIPSWLGSLIQLGELELSFNQFSGSIPLGLFKQSNLLVLSLNNNSLNGSLPADIGGLASLNILRLDHNKFSGSIPHAIGKLSNIFELQLSGNDFSGEIPIEIGSLQNLQSILDLSYNNISGNIPSSLVMLSKLEVLDLSHNQLTGEVPSAVGEMTSLQKLDISYNKLQGALDNQFSRWPHKAFEGNLHLCGASLGSCDSDGASSNKRLVLSRKSLVIVSVLSTLAVIALLVLAVIIFKNKQEFFRKGSELSFVFSSSSRAQKRPLIPITMPGKREFRWEDIMDATNNLSDEFIIGCGGSGTVYRVELPTGETLAVKKISWKDDYLLHKSFIRELKTLGRIKHRHLVKLIGCCSNRNNGGGWNLLIYEYMENGSVWDWLHGQPLKAKGRLDWDTRFKIAVGLAHGVEYLHHDCVPKIIHRDIKSSNVLLDSNMEAHLGDFGLAKSLLENHESNTDIGIVLMELVSGKLPTDAAFRGGIDMVRWVKMHVEMQGNEVDEVIDPHMKPLLPGEEFAAFQVLEIAVQCTKTAPQERPTGRQVCDFLLRVSDNKILEFEKTNLDHCY 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03235 1233 ProSiteProfiles Leucine-rich repeat profile. 299 321 IPR001611 GO:0005515
Pste2g03235 1233 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 922 1040 - -
Pste2g03235 1233 FunFam Os07g0541700 protein 1045 1130 - -
Pste2g03235 1233 Gene3D Transferase(Phosphotransferase) domain 1 1041 1126 - -
Pste2g03235 1233 ProSiteProfiles Protein kinase domain profile. 960 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03235 1233 SUPERFAMILY L domain-like 619 864 - -
Pste2g03235 1233 ProSiteProfiles Leucine-rich repeat profile. 251 274 IPR001611 GO:0005515
Pste2g03235 1233 Gene3D Ribonuclease Inhibitor 194 288 IPR032675 -
Pste2g03235 1233 SMART serkin_6 960 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03235 1233 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 291 390 - -
Pste2g03235 1233 PRINTS Leucine-rich repeat signature 373 386 - -
Pste2g03235 1233 PRINTS Leucine-rich repeat signature 802 815 - -
Pste2g03235 1233 SMART LRR_typ_2 681 705 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 249 273 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 562 585 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 633 657 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 826 857 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 297 320 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 370 394 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 802 825 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 153 176 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 105 129 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 729 753 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 490 514 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 201 225 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 321 345 IPR003591 -
Pste2g03235 1233 SMART LRR_typ_2 418 442 IPR003591 -
Pste2g03235 1233 Pfam Leucine rich repeat N-terminal domain 37 72 IPR013210 -
Pste2g03235 1233 SUPERFAMILY L domain-like 45 387 - -
Pste2g03235 1233 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 197 290 - -
Pste2g03235 1233 Gene3D Ribonuclease Inhibitor 32 193 IPR032675 -
Pste2g03235 1233 Gene3D Ribonuclease Inhibitor 289 391 IPR032675 -
Pste2g03235 1233 Gene3D Phosphorylase Kinase; domain 1 922 1040 - -
Pste2g03235 1233 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 487 1213 - -
Pste2g03235 1233 Pfam Protein kinase domain 965 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03235 1233 Pfam Leucine rich repeat 783 839 IPR001611 GO:0005515
Pste2g03235 1233 Pfam Leucine rich repeat 131 190 IPR001611 GO:0005515
Pste2g03235 1233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1088 1100 IPR008271 GO:0004672|GO:0006468
Pste2g03235 1233 SUPERFAMILY L domain-like 290 623 - -
Pste2g03235 1233 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 484 580 - -
Pste2g03235 1233 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 581 873 - -
Pste2g03235 1233 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 391 483 - -
Pste2g03235 1233 Gene3D Transferase(Phosphotransferase) domain 1 1127 1217 - -
Pste2g03235 1233 Pfam Leucine Rich Repeat 251 270 IPR001611 GO:0005515
Pste2g03235 1233 Gene3D Ribonuclease Inhibitor 535 873 IPR032675 -
Pste2g03235 1233 Gene3D Ribonuclease Inhibitor 396 534 IPR032675 -
Pste2g03235 1233 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 32 196 - -
Pste2g03235 1233 SUPERFAMILY Protein kinase-like (PK-like) 935 1213 IPR011009 -
Pste2g03235 1233 ProSitePatterns Protein kinases ATP-binding region signature. 966 989 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03235 Pste-Chr2 32193468 32197471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03235 52 630 Receptor kinase-like Gene Family AT5G56040 37.920 4.47e-96 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste2g03235 Pkinase 3.7e-28 CL0016