Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03221 GTTAAATTCCAAACAAAGAGGTTAGGGCTGGGAGTTTTCAGCAGCAAGTGAAGAATCTACAATGGAAGCATACGGTGGGTTCGTCGTCGACGAGAAAGCCGTTAGGGTTGAGAACGCTTTCTTGGATTTTCTCAAAAGTTTCAAAGGCCAAAGGAACGAACTTTGTTACGAAGCTGAGATCGAAATGATGAAATTGAATGAATCCAACACTATGTTCGTTGATTTCGAGCATGTCATCAAATTCAGTGACCTCCTCCAACAAACCATCTCCGATGAATATTTGAGGTTTGAACCTTATTTGAAGAATTCTTGCAAGAGGTTTGTTATGGAGCAAAAGCCACAGGTCGATGAACCTGACAAGGATATCAACATTGCCTTCTTCAACATTCCTGTCATTAAGCGGTTAAGAGAATTGGGTACATCAGAAATTGGAAGGCTCGTGTCTGTGACAGGAGTGGTGACGAGGACGAGTGAAGTTCGACCTGAACTTCTCCAAGGGACTTTCAAGTGTCTGGACTGCGGTAGTGTTTCAAAGAATGTTGAACAGCAATTCAAGTATACCGAGCCAACAATCTGTGCAAATGCCACCTGTAGCAATCGAACAAGGTGGGTACTGCTGCGCCAAGATAGCAAATTTGCTGACTGGCAGAGGGTCAGAATGCAGGAGATGTCTAAAGAGATACCTGCAGGCTCTCTTCCTAGGTCATTGGACGTCATTCTTCGTCATGAGATTGTAGAACAGGCCAGGGCTGGTGACACGGTAATTTTCACAGGGACCGTGGTTGTTATACCTGACATAATGGCAATGGCATCTCCTGGAGAAAGATCAGAGTGCCGTCGGGATGCTTCTCAACACAAGGGTTCTGCAGCTGGAAATGAAGGTGTGAGTGGCCTTAAGGCTCTTGGAGTCAGAGACCTCTCTTATCGTCTAGCTTTTATTGCCAACTCTGTTCAGATTTGTGATGGTAGAAGAGAAATAGACATCAGGAATAGAAAGAAGGATGCTGATGAAGAAAATCAACAGTTTACTGAACAAGAACTAAATGAAATTCGTAGGATGAGGAACACTCCAGATTTTTTCACCAAACTAGTTGAAAGCATTGCTCCAGCTGTTTTTGGTCATCCAGATATAAAGAGAGCAATCCTTCTTATGCTTATGGGTGGTGTCCACAAATTTACTCATGAAGGCATCAACCTAAGAGGAGACATAAATGTTTGTGTTGTTGGAGATCCCAGCTGTGCAAAATCTCAATTTCTTAAGTATACGTCAGGCATAGTTCCAAGATCTGTGTATACATCAGGGAAATCATCATCTGCAGCTGGCTTGACTGCAACTGTTGCCAAGGAACCAGAAACTGGGGAGTTTTGTATTGAGGCTGGTGCTTTGATGCTTGCGGACAATGGCATTTGCTGCATTGATGAATTTGACAAGATGGACATCAGAGATCAGGTTGCCATTCATGAAGCAATGGAACAACAGACTATTAGTATCACAAAAGCAGGAATACAAGCAACACTTAATGCTCGTACTTCCATTCTTGCTGCTGCTAATCCTGCTGGTGGACGCTATGATAAATCTAAACCGCTTAAGTACAATGTGGCCCTTCCACCAGCTATACTTTCAAGGTTTGATCTTGTATACGTTATGATTGATGACCCTGACGATCAGACAGACTACCACATAGCTCATCATATTGTGAGAGTTCATCAAAAGCATGAAGCCGCTCTTGCTCCTGCATTCACTACAGCAGAACTGAAGCGTTATATAGCTTATGCAAAAACTCTTAAACCAAAGCTTACGCCAGATGCCAGAAAACTACTGGTAGACTCTTATGTTGCTCTCCGTAGAGGTGATACTAATCCTGGGAGTAGGGTTGCATATCGTATGACAGTTAGACAGTTGGAGGCATTGATCAGGCTGTCGGAGGCCATTGCACGATGTCATTTGGACAATGAGGTACAACCTCGTCATGTTCGTCTAGCAGTAAAACTGCTGAAAACTTCCATAATAAGCGTGGAGTCCAGTGAGATCGATCTCTCTGAGTTTCAAGAAAACCATGATGATGGCACTGGTGGTGGCAATGAAAATGATAATAATAGAGATGCTAATGATCAAGTGGGCAGCGATGCAGTTCAGCAAGCTACTGAAAATGTTAATGATCAAGTGGGAACCGATGCTCAGCAAGCTGCTGGAAATGATGGAAATCCTGCAGATGGAGCTAGACCCCAAGCGAAAAAACTCATTATAAGTGATGAATATTTTCAGAGAGTTACCAGCGCCGTTATAATGCGTCTTAGACAGCATGAAGAGGCTGCTAGCCAAGAAGGCGGTTTAACTGGGATGAGGCAAAAAGATTTGATTCAATGGTACATAGACCAGCAAAATGAGAGAAACAACTACAGTTCGATGGAGGAGGTGACAACTGAAATTTCCAAAATTAAAGCTATTATAGAGAGCTTAATTAGAAGAGAGGGTCATTTGATAGTGGTAGACGATGGGCAAGAAGCAGCAGCAGAAGCAGGAGGTGCACCAAGAAATTACCGAATTCTAGCAGTGGCTCCTAATTATGTCATTGATTGATACCCCGGTGAAAGAAATTGGGAAATCACTTCATATCTCATTCAAGTTGTTGCAGTGACCTCATGGTTGACTGTCTCGTGCTGCAAACTGGTTCCTTATCCGATCACTGTATTTATAGTGTGGAAAATTGATGATGGCCTTTTATATTGCATCCGTATCTAATTGAGTATATTTTTTCCATTATTTTATGGTCCTTGTCATCATCTTTTTACTACCGAAGGGACTTGTAGAAGTTTGACTACGTTCAAAAATTAGACACGTATTTTTACACATCCTGATTTTCATCAACAACTTATATGTACTATTTAATCTTTATAATGTCCGGTTGAGTTCATGGTAGTTCAGTTGTGAATAATATTTGAGAAAAGATCAGTGAAAAAATCGATGGATACTATTCAAT 2981 0.419 MEAYGGFVVDEKAVRVENAFLDFLKSFKGQRNELCYEAEIEMMKLNESNTMFVDFEHVIKFSDLLQQTISDEYLRFEPYLKNSCKRFVMEQKPQVDEPDKDINIAFFNIPVIKRLRELGTSEIGRLVSVTGVVTRTSEVRPELLQGTFKCLDCGSVSKNVEQQFKYTEPTICANATCSNRTRWVLLRQDSKFADWQRVRMQEMSKEIPAGSLPRSLDVILRHEIVEQARAGDTVIFTGTVVVIPDIMAMASPGERSECRRDASQHKGSAAGNEGVSGLKALGVRDLSYRLAFIANSVQICDGRREIDIRNRKKDADEENQQFTEQELNEIRRMRNTPDFFTKLVESIAPAVFGHPDIKRAILLMLMGGVHKFTHEGINLRGDINVCVVGDPSCAKSQFLKYTSGIVPRSVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDEFDKMDIRDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPAGGRYDKSKPLKYNVALPPAILSRFDLVYVMIDDPDDQTDYHIAHHIVRVHQKHEAALAPAFTTAELKRYIAYAKTLKPKLTPDARKLLVDSYVALRRGDTNPGSRVAYRMTVRQLEALIRLSEAIARCHLDNEVQPRHVRLAVKLLKTSIISVESSEIDLSEFQENHDDGTGGGNENDNNRDANDQVGSDAVQQATENVNDQVGTDAQQAAGNDGNPADGARPQAKKLIISDEYFQRVTSAVIMRLRQHEEAASQEGGLTGMRQKDLIQWYIDQQNERNNYSSMEEVTTEISKIKAIIESLIRREGHLIVVDDGQEAAAEAGGAPRNYRILAVAPNYVID 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03221 839 Pfam MCM6 C-terminal winged-helix domain 725 838 IPR041024 -
Pste2g03221 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 650 IPR027417 -
Pste2g03221 839 Gene3D - 723 839 - -
Pste2g03221 839 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 112 124 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Pste2g03221 839 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 215 226 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Pste2g03221 839 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 162 179 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Pste2g03221 839 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 274 295 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Pste2g03221 839 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 73 85 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Pste2g03221 839 FunFam DNA helicase 723 839 - -
Pste2g03221 839 SUPERFAMILY Nucleic acid-binding proteins 20 245 IPR012340 -
Pste2g03221 839 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 10 782 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pste2g03221 839 MobiDBLite consensus disorder prediction 660 688 - -
Pste2g03221 839 Pfam MCM OB domain 115 243 IPR033762 -
Pste2g03221 839 ProSitePatterns MCM family signature. 448 456 IPR018525 GO:0003677|GO:0005524|GO:0006260
Pste2g03221 839 Pfam MCM N-terminal domain 18 108 IPR027925 -
Pste2g03221 839 Gene3D - 142 193 - -
Pste2g03221 839 Pfam MCM P-loop domain 327 549 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste2g03221 839 Gene3D - 319 666 IPR027417 -
Pste2g03221 839 MobiDBLite consensus disorder prediction 660 674 - -
Pste2g03221 839 CDD MCM6 342 648 - -
Pste2g03221 839 Gene3D - 115 243 IPR012340 -
Pste2g03221 839 ProSiteProfiles MCM family domain profile. 339 545 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste2g03221 839 FunFam DNA helicase 324 654 - -
Pste2g03221 839 FunFam DNA helicase 142 193 - -
Pste2g03221 839 Gene3D - 8 111 - -
Pste2g03221 839 Pfam MCM AAA-lid domain 564 649 IPR041562 -
Pste2g03221 839 Coils Coil 783 803 - -
Pste2g03221 839 SMART mcm 111 650 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pste2g03221 839 Coils Coil 313 333 - -
Pste2g03221 839 PRINTS Mini-chromosome maintenance (MCM) protein family signature 440 454 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste2g03221 839 PRINTS Mini-chromosome maintenance (MCM) protein family signature 492 504 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste2g03221 839 PRINTS Mini-chromosome maintenance (MCM) protein family signature 519 527 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste2g03221 839 PRINTS Mini-chromosome maintenance (MCM) protein family signature 380 395 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste2g03221 839 PRINTS Mini-chromosome maintenance (MCM) protein family signature 468 481 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03221 Pste-Chr2 32058701 32064337 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03221 1 839 Core DNA Replication Machinery Family AT5G44635 70.125 0.0 1244