Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03186 GCACTCATCTTCGTTCTCGTCTTCTCTGCTTTATAGATCTTTGCGAAAGAACTTGTTAACAATTAACCAAAGATGCAGAACGAGGAAGGACAGATCACCGAGCTTTACATTCCTAGGAAGTGCTCTGCAACAAATAGATTGATTACTGCAAAGGACCATGCTTCGGTTCAGATTAACATTGGCCATGTCGATGAGAACGGTATTTACAATGGCCAATTCTCCACTTTTGCTCTCTGTGGCTTCATCCGTGCTCAGGGTGATGCCGACAGTGCCCTAGATCGCTTGTGGCAGAAGAAAAAAGTTGAAGTTAAGCAACAGTAGATCGACTATAGTTTGATACCTTTTTATATATTAATTTCTACTTTTGCTAGAGATATTTGAGTATTATGATTGTCTTTTTGAGCAAAATACTTAGTTCTGAATTTTTCCTTGGTACTTAGTATCTCGAGCTAAGTTGTTTTTGAGACCGTTTGTTTATCCTCTGTTTCAATCTTACATCAGATTTTTTCTTTTTTAAATTTTAATTGTGATTTAACCTTAAACAGTTAAGGTGACCCTGATGAATGCTACAGATACCTTCAACAACTGAATAATTTGACATAGTGTAAAACTATTTATAGTAATTCCTGGAATTTGAATAATAAAGATTGCA 652 0.3574 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHVDENGIYNGQFSTFALCGFIRAQGDADSALDRLWQKKKVEVKQQ 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03186 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Pste2g03186 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Pste2g03186 82 FunFam 40S ribosomal protein S21 1 81 - -
Pste2g03186 82 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Pste2g03186 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Pste2g03186 82 Gene3D - 1 81 IPR038579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03186 Pste-Chr2 31744817 31746537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03186 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 85.185 1.36e-52 157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03186 2 31744817 31746537 Pste2g03186 2 31744817 31746537 ECH