Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03178 ATGTCTTCTTCCTGGCTAACTTCTCCTTCTTGTTCCGCCTCCACCATAGATTCATCTTCCCCTACTGAACGACTTTTAGTTCAGTGGTTGAGGTTTGTTTTTCTATCACCATGTCCTCAACGGTATCTTCTTTCTGCCGTTGATATAACCTTCTTGCTCTCTCTCTTAGCCTTTGCAGCTATTAAACTCCATTCTCGATTCACTTCCCGTGCCACCTCCAACCCCGCCATCTCCAAACCCCTTTTGCAAGACAAAGACTGTGACTACAAAGTTACCTACTTGTTCAAACTACCCTTCTTGGTGATCTCCCTTTTGGCCGTAGCTTACGTGGTTCTTGGTATCTTGGTCTTCACTCAAACCACCCTTTCATCATGGAAACGCATAGAGGCACAGTTTCGGTTCTTTCAAGCTGTATGCAACATAGTTATAGTGATCCTGATGGTTCACGAGAGGAAGTTCAAAGCTTCAGAGCACCCTTTGTCGCTGAGAATCTATTGGATTGCAAACTTGGTGCTTTCGTGCTTGTTTGCAACTTCAGCTATTCTTCGCTTGGTAACTGTCGATGGAGCGAAACTGGAGCTTAGTTTGAGAGTGGATGACATATTCTCTTTGGTTAATCTTCCATTATCTGTGTTCCTTTTCCTAGTAGCAATGAAAGGGTCAACGGGGATTCAAGTGATTAGAATTTCTGATGTAGGGTGCCTTTCCACTGCCACAAATTTGAGTCCTTATGCTTATTCTTCGGTTTTGTCCAAACTACTGTGGCTTTGGATGAACCCTCTGCTGAATAAAGGATACGAAACACACCTCAAGCTTGAAGATGTGCCTTCTCTTCCTCTTAACTTCCGAGCAGAAAAGATGTCAGAGCTTTTCCAAAGCAAATGGCCAAAGCCCGAGGAAAACAGCAAGCACCCAGTTGCAGTCACCTTGTTTAGATGCTTCTGGAAGCACATAGTCTTCACTGGCTCCCTTGCAGTTATAAAACTTGGAGTTATGTATATTGGTCCAATGCTTATTCAGAGTTTTGTTGATTTCACCTCAAGAAAAGACAGCACTCCCGTTGAAGGCGTTGTTCTGATACTGATCCTGTATTTGGCAAAATCAACTGAGGTCCTCACTTCGCACCAATTCAATTTCCACACTCAGAAAGTAGGCATGCTAATCCGTTCCAGCATCATCACTTCTGTGTACAGAAAGGGTTTGAGATTGTCCAGTTCTTCAAGGCAATCTCATGGGACTGGCCAGATTGTGAACCACATGTCTGTTGATGCACAACAACTCGCTGATTTTATGACGCAGCTTCACCCCATATGGTTGATGCCACTGCAAGTCACTGCAGCTTTGGCCCTTATTTACAGCAATATTGGCGTATCTGCATTTGCAGCGCTTTTAGGATCCTCTTTGGTGTGTCTTTTCACTCTAATTCGAACCAAGAAGAGCAACAGCTTCCAGTTCAGGATAATGAAGAGTCGTGACTTGAGGATGAAGGCAACGAATGAGTTGCTAAACAACATGCGTGTCATCAAGTTCCAAGCGTGGGAGGAGTACTTTGGCAACAAGATTCAAGAGTATCGTGAATCTGAGCATAGTTGGATTGGCAAGTTCTTGTACTTCTTTGCCATTAACATGGGAATTCTGACCACTGCTCCCTTGATGGTAACTGTTCTCACATTTGGAACTGCTACTTTTGTGGGTGTTCCTTTGAATCCTGGCAATGTGTTCACAATTACTTCGGTGATCAAGATTTTGCAAGAGCCTGTGAGGACCTTCCCTCAGGCTCTTATCGTGATTTCTCAGGCATTGGTTTCTCTAGGGAGGTTGGATGAGTTCATGACGAGCAAGGAAATGGATGAGGGTGCAGTGGAGAGAGTGGTTGGTTGTGACGGTGATGCGGCTTTGGAGATCAAAGATGGGGAATTCTCGTGGGAAGATGCAGATGAGAATGTGGATCTGAAAGTTGAACATATGGTAATTAAGAAAGGGGAGCATGCTGCTGTTGTAGGAACAGTAGGGTCAGGCAAGTCTTCGTTATTGGCTTCTGTGTTAGGGGAAATGTTCAAGATATCAGGAAAGGTCAAAGTTTGTGGGTCAATAGCCTATGTAGCACAGACATCATGGATTCAGAATGCAACCATCCAAGACAACATATTGTTTGGTTTACCAATGAACGGAGAGAAGTACAAGGAAGCTATAAGAGTTTGCTGCCTGGAAAAGGATCTAGAAATGATGGAACATGGAGATCAGACTGAGATTGGAGAAAGGGGTATTAACCTCAGTGGTGGCCAGAAGCAACGTGTACAACTTGCTAGAGCTGTATACCAAGACTGTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCACAAACGGGATCATTTCTTTTTAAGGAATGTATCATGGGAGCTCTAAAAAATAAGACCATTTTACTTGTAACCCACCAAGTTGACTTCTTGCATAATGTTGACTGTATTATGGTGATGAGAGAAGGGAAAATCGTGCAAAGTGGGAAGTATGATGAACTTCTCAAAGCAGGTCTGGATTTTGGTGCACTTGTGGCTGCTCATGAATCCTCTATGGAGATTGCAGAGTCTAGTGATAAAGGTGATAATGATTCTCCTCAGTCTCCAAAACTGGCTCGAATGCCTTCAAAAGAAAAGGAAAATGCAGGTGAAAAGCAACCTCAAGATCAATCTAAGTCAAATAAGGCCACAGCAAAGCTCATTGAAGATGAGGAAAGAGAAACTGGCCGTGTGAACCTTAAAGTGTATAAACACTATTTAACTGAAGCTTTTGGGTGGTGGGGTGTTGCACTGATGCTGACAATGTCTCTAGCATGGATTTTATCTTTCTTGTCGGGTGACTATTGGCTAGCAATTGGAACTGCAGAAGATTCTCCCTTTTCTCCTTCAACATTCATTATTGTCTATGCTTGCATAGCTGTTGTTGTATGTGCAGTGGTGATGACCAGATCAATCTTGTTTACCTATTGGGGTCTAAAGACATCTCAAAGCTTCTTCACGGGATTGCTTCAAAGCATCCTGCATGCACCAATGTCATTCTTTGACACCACTCCCTCCGGCAGAGTTTTGAGTCGTGTATCTACTGATATACTTTGCGTGGATATATCAATTCCAATGTTATTAAACTTCGTACTGGGATCGTACTTCTCAGTAATTAGCATCCTCGTTGTAACATGCCAAAATGCTTGGGAGACGGTCTTTCTCTTAATCCCTCTGTTCTGGCTGAATAACTGGTATCGGAAATTTTACCTTGCATCTTCTCGGGAATTGTCTCGCCTTGGTTCTATCACCAAAGCTCCTGTAATTCACCACTTTTCAGAAACCATTGCTGGTGTTATGACCATTCGTGGCTTCAGAAAGCAGAACACATTTTGTGAAGAAAATATTGACAAAGTCAATGCTAGTCTGAGAATGGATTTCCATAACAATGGTTCTAATGAATGGCTTGGTTTTCGCTTGGACTATATGGGAGTGGTTTTCCTTAGCTTGGCCACTATTTTTATGATCTTTCTACCTAGTAATATTGTTAAGCCAGAATATGTTGGTTTGTCTTTGTCCTATGGCCTGGCTCTCAGTAGTCTCTTGGCGTTTACCATAAGCATGACTTGCAATGTTGAGAACAAAATGGTTTCGGTTGAGAGAATAAAACAGTTCACCAACCTTCCCTCAGAAGCTACATGGAGAATTCCTGATAGGTCTCCTCCTTGGGATTGGCCTAGTGAAGGCAATATTGAGTTGGATAATTTGCAGGTTCGCTATCGATCAAATACTCCTCTGGTTCTCAAGGGAATATCTCTCACCATTCACGGAGGAGAAAAGGTTGGTGTTGTTGGTCGTACAGGGAGTGGAAAATCAACCCTCATTCAGGTGCTATTTAGGTTGATTGAGCCTGCAGCTGGGAAAATAATTGTTGATGGTATCAACATTTGCACTCTGGGTCTTCATGATTTGAGGTCTAGATTTGGAATCATTCCCCAAGAGCCTGTCCTCTTTCAAGGGACAGTACGGAGCAACATTGACCCCCTTGGACTGTATTCAGAAGAAGAAATTTGGAAGAGCCTTGAGCGTTGCCAACTGAAAGATGTGGTGGCTGCAAAGCCTGAGAAACTTGAGGCTTCAGTGGTTGATGGTGGAGACAATTGGAGTGTGGGGCAAAGACAGCTTCTTTGCTTGGGAAGGATCATGCTAAAACGCAGCAAAATACTATTCATGGATGAGGCAACAGCATCCGTTGATTCACAAACTGATGCTGTGATACAAAAGATCATCCGTGAGGATTTTGCGGATCGCACAATTATCAGCATTGCTCATAGAATACCAACTGTCATGGACTGTGACAGAGTTTTGGTCATTGATGCAGGCTATGCAAAGGAATATGACAAGCCATCACGATTGCTAGAAAGTCCTACAATTTTTGGGGCATTGGTTAAGGAGTACACAAATAGATTAACTTAGAGCCTTAGAGTTAGAGGTAGATCCATAAGGCATCAGACTCGCTCTCTACCACGCAGGGTAGATCCATATTTTTCGAGCCTTTTCATTTTCTACTTTTCTCCTTTTCTTTTTGGTACTAAGGTTGCACCCTTTCAATAATTAGACTAGGATAATATGTAAGGAAATTTTAAACTATTTACTTGTAAAATATTCAGTTTATGGTTTAT 4688 0.4266 MSSSWLTSPSCSASTIDSSSPTERLLVQWLRFVFLSPCPQRYLLSAVDITFLLSLLAFAAIKLHSRFTSRATSNPAISKPLLQDKDCDYKVTYLFKLPFLVISLLAVAYVVLGILVFTQTTLSSWKRIEAQFRFFQAVCNIVIVILMVHERKFKASEHPLSLRIYWIANLVLSCLFATSAILRLVTVDGAKLELSLRVDDIFSLVNLPLSVFLFLVAMKGSTGIQVIRISDVGCLSTATNLSPYAYSSVLSKLLWLWMNPLLNKGYETHLKLEDVPSLPLNFRAEKMSELFQSKWPKPEENSKHPVAVTLFRCFWKHIVFTGSLAVIKLGVMYIGPMLIQSFVDFTSRKDSTPVEGVVLILILYLAKSTEVLTSHQFNFHTQKVGMLIRSSIITSVYRKGLRLSSSSRQSHGTGQIVNHMSVDAQQLADFMTQLHPIWLMPLQVTAALALIYSNIGVSAFAALLGSSLVCLFTLIRTKKSNSFQFRIMKSRDLRMKATNELLNNMRVIKFQAWEEYFGNKIQEYRESEHSWIGKFLYFFAINMGILTTAPLMVTVLTFGTATFVGVPLNPGNVFTITSVIKILQEPVRTFPQALIVISQALVSLGRLDEFMTSKEMDEGAVERVVGCDGDAALEIKDGEFSWEDADENVDLKVEHMVIKKGEHAAVVGTVGSGKSSLLASVLGEMFKISGKVKVCGSIAYVAQTSWIQNATIQDNILFGLPMNGEKYKEAIRVCCLEKDLEMMEHGDQTEIGERGINLSGGQKQRVQLARAVYQDCDIYLLDDVFSAVDAQTGSFLFKECIMGALKNKTILLVTHQVDFLHNVDCIMVMREGKIVQSGKYDELLKAGLDFGALVAAHESSMEIAESSDKGDNDSPQSPKLARMPSKEKENAGEKQPQDQSKSNKATAKLIEDEERETGRVNLKVYKHYLTEAFGWWGVALMLTMSLAWILSFLSGDYWLAIGTAEDSPFSPSTFIIVYACIAVVVCAVVMTRSILFTYWGLKTSQSFFTGLLQSILHAPMSFFDTTPSGRVLSRVSTDILCVDISIPMLLNFVLGSYFSVISILVVTCQNAWETVFLLIPLFWLNNWYRKFYLASSRELSRLGSITKAPVIHHFSETIAGVMTIRGFRKQNTFCEENIDKVNASLRMDFHNNGSNEWLGFRLDYMGVVFLSLATIFMIFLPSNIVKPEYVGLSLSYGLALSSLLAFTISMTCNVENKMVSVERIKQFTNLPSEATWRIPDRSPPWDWPSEGNIELDNLQVRYRSNTPLVLKGISLTIHGGEKVGVVGRTGSGKSTLIQVLFRLIEPAAGKIIVDGINICTLGLHDLRSRFGIIPQEPVLFQGTVRSNIDPLGLYSEEEIWKSLERCQLKDVVAAKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFADRTIISIAHRIPTVMDCDRVLVIDAGYAKEYDKPSRLLESPTIFGALVKEYTNRLT 1493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03178 1493 SUPERFAMILY ABC transporter transmembrane region 935 1233 IPR036640 GO:0005524|GO:0016020
Pste2g03178 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 324 599 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste2g03178 1493 FunFam ABC transporter C family member 4 616 874 - -
Pste2g03178 1493 Pfam ABC transporter 656 784 IPR003439 GO:0005524
Pste2g03178 1493 Pfam ABC transporter 1270 1418 IPR003439 GO:0005524
Pste2g03178 1493 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 246 1487 - -
Pste2g03178 1493 Gene3D - 614 876 IPR027417 -
Pste2g03178 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1253 1487 IPR003439 GO:0005524
Pste2g03178 1493 SMART AAA_5 660 833 IPR003593 GO:0016887
Pste2g03178 1493 SMART AAA_5 1279 1463 IPR003593 GO:0016887
Pste2g03178 1493 Gene3D ABC transporter type 1, transmembrane domain 293 613 IPR036640 GO:0005524|GO:0016020
Pste2g03178 1493 Gene3D ABC transporter type 1, transmembrane domain 900 1234 IPR036640 GO:0005524|GO:0016020
Pste2g03178 1493 FunFam ABC transporter C family member 5 901 1234 - -
Pste2g03178 1493 FunFam ABC transporter C family member 10 302 615 - -
Pste2g03178 1493 ProSitePatterns ABC transporters family signature. 758 772 IPR017871 GO:0005524|GO:0016887
Pste2g03178 1493 FunFam ABC transporter C family member 3 1236 1487 - -
Pste2g03178 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 633 856 IPR003439 GO:0005524
Pste2g03178 1493 CDD ABC_6TM_ABCC_D2 934 1228 IPR044726 GO:0140359
Pste2g03178 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 935 1216 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste2g03178 1493 CDD ABC_6TM_ABCC_D1 320 607 IPR044746 GO:0140359
Pste2g03178 1493 MobiDBLite consensus disorder prediction 863 910 - -
Pste2g03178 1493 Pfam ABC transporter transmembrane region 961 1180 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste2g03178 1493 Pfam ABC transporter transmembrane region 323 587 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste2g03178 1493 Gene3D - 1238 1485 IPR027417 -
Pste2g03178 1493 CDD ABCC_MRP_domain2 1251 1471 - -
Pste2g03178 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 630 852 IPR027417 -
Pste2g03178 1493 CDD ABCC_MRP_domain1 633 833 - -
Pste2g03178 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1243 1486 IPR027417 -
Pste2g03178 1493 SUPERFAMILY ABC transporter transmembrane region 310 615 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03178 Pste-Chr2 31677090 31685734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03178 633 879 Calmodulin-binding Proteins AT2G36910 28.517 1.31e-24 110