Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03165 CACACACACACTCTCTCTCTCTCTCTCTTTCTTCGCTTTTCTCTGCTGCTAAAGTCTCAGTCTCGAAACTAAAGCACAAAAGACAGTAAGTAACGCTCTCTTTCTTGAATCTTGAAGTTGAACAGCCCAGGAGGCGAGAAATCAAAATGTCCACCCAGAATCGTCGTTCGTCGTTTTCGTCCTCAACGACGTCGTCTTTGGCCAAACGCCATGCATCCGCACCCGCTTCCTCCTCAACCACCTCGTCTTTGGCCAAGAAGCGGCCTCCTCTCTCTAACCTCACCAACACCATTGCTCACCGAAACTCCTCCTCTTTGGTTCCATGCGCAGCTAAAGTTGCCAAGACCAAGAAAGAGGTCGCTCCGCCCTGTTCCGCCAACAAAACATCCACATTACTCAACGTTAAACCTACTAATGCAGTTGTTTTTCCTAAGGTTAATTCTTTTCCTCTAAGAAATGAAGCTCCTCCTATTCCTCCTGCTCCATCACTTGTTGTTGCCACCGTTACTGTTCCAGCCCCGACCACCGTGGTGGTCGATGTTTCACCTACTAAATCAGATGGAATGTCTGTTTCTATGGATGAGTCCATGTCTTCTTGCGATTCCTTCAAGAGTCCCGACATTGAATATGTCGATAATACCGCAGTTGATTCAATTCAGAGGAAGACATTCAGCAATCTCAACATCTCCGATTCTACAGATTCAGGAAACATTTGTAGTAGAGACATACTTGTGGAATTGGAAAAGGGGGACAAGTTTGTCAATGTTGATAATAATTACGCAGATCCACAGCTATGTGCAACCTTTGCTTGTGATATCTACAAGCACCTTCGGGCATCTGAGGCAAAGAAAAGGCCTTCAACAGACTTCATGGAGAAAATTCAGAAGGACATAAATCCAAGCATGCGTGCTATTTTGATTGACTGGCTTGTGGAGGTGGCAGAAGAGTATAGACTAGTACCTGATACATTGTATTTGACAATAAACTACATTGATAGGTATCTTTCAGGGAATGTGATGAACAGACAAAGGTTACAATTACTTGGTGTTGCCTCCATGATGATTGCCTCTAAATACGAGGAGATTTGTGCACCTCAGGTGGAGGAATTCTGTTACATAACCGATAACACATACTTCAAAGAAGAGGTTTTGCAGATGGAATCTGCTGTTCTGAATTTTCTCAAGTTCGAAATGACAGCCCCAACAGTAAAATGTTTCTTAAGAAGATTTGTACGTGCAGCTCAAGGAGTCGACGAGGTCGCTTCGCTACAATTAGAGTGCTTGACAAACTATATTGCTGAATTGTCTCTGTTGGAGTACAGTATGCTTTGTTATGCTCCATCACTTGTAGCCGCTTCTGCAATTTTTCTGGCCAAATTTATACTTTTCCCTTCAAAGAAACCATGGAATACCACATTGCAGCATTACACGCTGTACCTGCCTTCTGATCTGTGTGTTTGTGTAAAAGATCTCCACCGCTTTTTTTGCAACAGCCCTAACTCTAATTTGCCTGCCATTAGGGAGAAATACAGTCAGCACAAGTATAAATATGTGGCCAAGAAGTACTGCCCTCCTTCAATACCCCCAGAATTTTTTCAGAATTGAGCAGAGATGACCAGTCTAATTTCCGGTTGGGATAGGCTTAGATTGACATAACTTTCTGAGAAGATGCTTCTCTTACACTGTACAATGTAGTTGCCAACCCTTCCATCTTAATTAGAATTCTTGTATCTGCTTATATTTGCGTGCATAATCGTATGCACCCAAATTCACCAAAAAATCAACGCTTCAATAAGCAATTTGTATTATTAGCTACTGCTTCAGTAGCATCATTAATGGCTAAAGGAGCCAATGCCCAAAATTTTGTCTAATTTAACTCCTGCAAC 1885 0.4249 MSTQNRRSSFSSSTTSSLAKRHASAPASSSTTSSLAKKRPPLSNLTNTIAHRNSSSLVPCAAKVAKTKKEVAPPCSANKTSTLLNVKPTNAVVFPKVNSFPLRNEAPPIPPAPSLVVATVTVPAPTTVVVDVSPTKSDGMSVSMDESMSSCDSFKSPDIEYVDNTAVDSIQRKTFSNLNISDSTDSGNICSRDILVELEKGDKFVNVDNNYADPQLCATFACDIYKHLRASEAKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTINYIDRYLSGNVMNRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNFLKFEMTAPTVKCFLRRFVRAAQGVDEVASLQLECLTNYIAELSLLEYSMLCYAPSLVAASAIFLAKFILFPSKKPWNTTLQHYTLYLPSDLCVCVKDLHRFFCNSPNSNLPAIREKYSQHKYKYVAKKYCPPSIPPEFFQN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03165 485 CDD CYCLIN_AtCycA-like_rpt2 352 466 - -
Pste2g03165 485 FunFam Mitotic cyclin 6 237 337 - -
Pste2g03165 485 Pfam Cyclin, C-terminal domain 352 471 IPR004367 -
Pste2g03165 485 Gene3D - 223 471 - -
Pste2g03165 485 PANTHER CYCLINS 169 463 IPR039361 -
Pste2g03165 485 SUPERFAMILY Cyclin-like 352 477 IPR036915 -
Pste2g03165 485 ProSitePatterns Cyclins signature. 254 285 IPR006671 -
Pste2g03165 485 SUPERFAMILY Cyclin-like 212 349 IPR036915 -
Pste2g03165 485 SMART cyclin_7 259 343 IPR013763 -
Pste2g03165 485 SMART cyclin_7 356 444 IPR013763 -
Pste2g03165 485 Pfam Cyclin, N-terminal domain 223 349 IPR006671 -
Pste2g03165 485 PIRSF Cyclin_A_B_D_E 1 481 IPR046965 GO:0016538|GO:0044772
Pste2g03165 485 MobiDBLite consensus disorder prediction 1 50 - -
Pste2g03165 485 FunFam Cyclin A1 339 471 - -
Pste2g03165 485 Gene3D - 237 350 - -
Pste2g03165 485 CDD CYCLIN_AtCycA_like_rpt1 213 348 - -
Pste2g03165 485 SMART Cyclin_C_2 352 475 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03165 Pste-Chr2 31598984 31602359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03165 4 485 Core Cell Cycle Gene Families AT1G44110 60.729 0.0 551
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03165 2 31598984 31602359 Pste2g03165 2 31598984 31602359 ECH
Pste8g01973 8 15417016 15421298 Pste2g03165 2 31598984 31602359 PCT