Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03150 AAGGAAGAGAGAGTTTTAGCATAGTGATTCGTGACCTAACAATGGTGGAGAAGACTCATCCCATGGACATCGACAGCGACAGCGACGACCACACTTTCACCGCGAGGCCTGACAAGGGCAAAAGTGTCGTCGTCTCCGGCAGCCCTTCCTCCGCCAGAAAGGCTATTCCGTGGGTCGAAAAATACCGCCCTCAGTCCCTTCACGACGTCGCTGCTCACCGTGACATTGTCGATACCATTGATAGGCTGACCACTGAGAACAGATTGCCCCATCTTCTATTGTATGGCCCTCCTGGCACGGGCAAAACATCAACGATTCTTGCCGTGGCTCGTAAACTGTATGGTTCTCAGTACCACAATATGATTTTGGAGCTCAATGCATCGGATGATAGAGGAATTGATGTTGTGCGACAGCAGATTCAGGATTTTGCTAGCACTCAGAGCTTATCATTTGGTGTCAAGTCCTCTGTAAAACTGGTTTTGTTAGATGAAGCAGATGCCATGACAAAGGATGCCCAATTTGCATTACGTAGAGTGATTGAGAAATATACAAAGAGCACTAGGTTTGCACTTATCTGTAATCATGTAAACAAGATCATTCCTGCACTTCAATCAAGATGCACTCGGTTTCGGTTTGCCCCTCTTGATGCTGTCCATGTCACTGAAAGACTGAAACATGTTATTAAGGCTGAAGGGCTTGACGTTGAAGACAGTGGCTTAGCAGCTCTTGTTCGGCTTAGCAATGGTGATATGAGAAAGGCTTTGAATATTCTTCAGTCAACACATATGGCTTCTCAACAGATAACAGAAGAAGCTGTTTACCTGTGCACCGGGAATCCATTGCCCAAAGACATTGAGCAAATATCTTATTGGCTTTTAAATGAACAATTTGCAGATAGCTTTAGAAGAATATATGAAATGAAGACAAGGAAAGGGTTGGCCTTGGTTGATATAGTCAAAGAAGTGACAATGTTTGTTTTTAAGATTAAGATGCCTTCAGCTGTTCGAGTGCAGTTGATGAAAGATTTGGCAGACATAGAG 1040 0.4423 MVEKTHPMDIDSDSDDHTFTARPDKGKSVVVSGSPSSARKAIPWVEKYRPQSLHDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYHNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQFADSFRRIYEMKTRKGLALVDIVKEVTMFVFKIKMPSAVRVQLMKDLADIE 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03150 333 Gene3D - 266 333 - -
Pste2g03150 333 SMART AAA_5 74 204 IPR003593 GO:0016887
Pste2g03150 333 FunFam Replication factor C subunit 5 266 333 - -
Pste2g03150 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 259 IPR027417 -
Pste2g03150 333 MobiDBLite consensus disorder prediction 1 34 - -
Pste2g03150 333 SUPERFAMILY post-AAA+ oligomerization domain-like 266 333 IPR008921 GO:0003677|GO:0006260
Pste2g03150 333 FunFam Replication factor C subunit 5 203 265 - -
Pste2g03150 333 Pfam Replication factor C C-terminal domain 266 333 IPR013748 -
Pste2g03150 333 Gene3D - 36 200 IPR027417 -
Pste2g03150 333 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 43 331 - -
Pste2g03150 333 Gene3D - 204 265 - -
Pste2g03150 333 FunFam Replication factor C subunit 5 36 201 - -
Pste2g03150 333 CDD AAA 62 200 - -
Pste2g03150 333 CDD HLD_clamp_RFC 201 263 - -
Pste2g03150 333 MobiDBLite consensus disorder prediction 1 23 - -
Pste2g03150 333 Pfam ATPase family associated with various cellular activities (AAA) 78 199 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03150 Pste-Chr2 31433315 31440929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03150 1 333 Core DNA Replication Machinery Family AT1G77470 78.655 0.0 530