Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03147 ATGGCGCAAGCAGGAAACCAGGTGCATGTGTTCCCACGCAAGTTCAAGGAGACTAATCCAAACACTCAACAGTTCGATGAAAAGGGTTACAGTTACAGCCTCAGCGGCAAAATCATGCTTTCCGCTATAGTTCTCCTCTTCTTCGTCGTTATTTTGATGCTCTGTCTTCATATCTACGCCCGCTGGTACCTCAGACGCGTTCGCCGCCGCCACATCCGCCGCCAGCGCGACCGCCGCCGCAATCAGCTCGTTTTCTACAACGATTCCGTCATCCCCACCGCGCTCTCCCGCGGCCTCGACGCTGCCGTTCTCGCCACCATCCCCGTTTTTACTTTCCACCCCAAAACCGCCGAAAACGCGCCGGAATGTGCGGTTTGTTTGTCAGAGTTCGAACCGGGTGAACCGGGTCGGGTCTTGCCAAAGTGTAACCACAGCTTTCACACCGAATGCATCGACATGTGGTTCCACTCGCACGCCACGTGTCCCTTGTGTCGCGCCCCCGTTGAGCGCGTCCCCGAACCGGAAGCGGTTGTTGTAACTGTTCCCGACCCTGAACCGGGTTCGGTTTCCGTGCCAGTCGAGAACCGAACCGCTTCTTCCTCCTCATCCTCTTCGGTTGGGTCGAGGAAGTCTGATGTCACAATCGAGGTGCCTCCGAGGGGCGAAATATCTCAGAGCGAGTCTGGCCGCGACTCGCCGTCGACTCAGTCGTCGTTTCGGTCGCCGGTGAGTCGCATGTTGTCGTTTACGAGGATACTCAGCAGGGAACGGAAGGGGAGCGTTCCGCCGTCGCCGTGCGGTGGTGCTTGTAGCTCCGCCGCGGAGAGTGACACGGAGCGAGGTCGGCGGGAGGAGACTCAGTGA 864 0.5868 MAQAGNQVHVFPRKFKETNPNTQQFDEKGYSYSLSGKIMLSAIVLLFFVVILMLCLHIYARWYLRRVRRRHIRRQRDRRRNQLVFYNDSVIPTALSRGLDAAVLATIPVFTFHPKTAENAPECAVCLSEFEPGEPGRVLPKCNHSFHTECIDMWFHSHATCPLCRAPVERVPEPEAVVVTVPDPEPGSVSVPVENRTASSSSSSSVGSRKSDVTIEVPPRGEISQSESGRDSPSTQSSFRSPVSRMLSFTRILSRERKGSVPPSPCGGACSSAAESDTERGRREETQ 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03147 287 CDD RING-H2_EL5-like 122 165 - -
Pste2g03147 287 MobiDBLite consensus disorder prediction 225 248 - -
Pste2g03147 287 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 27 173 IPR044675 -
Pste2g03147 287 MobiDBLite consensus disorder prediction 179 287 - -
Pste2g03147 287 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
Pste2g03147 287 MobiDBLite consensus disorder prediction 192 211 - -
Pste2g03147 287 Pfam Ring finger domain 122 165 IPR001841 -
Pste2g03147 287 SUPERFAMILY RING/U-box 106 171 - -
Pste2g03147 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 173 IPR013083 -
Pste2g03147 287 SMART ring_2 123 164 IPR001841 -
Pste2g03147 287 FunFam RING-H2 finger protein ATL3 91 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03147 Pste-Chr2 31387086 31387949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03147 31 284 Rapid Response to Elicitors AT3G16720 49.466 4.39e-68 212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03147 2 31387086 31387949 Pste2g03147 2 31387086 31387949 ECH
Pste6g04087 6 30133174 30146276 Pste2g03147 2 31387086 31387949 PCT