Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03132 TGATGTTTTCTCTCACTTCTTCACATTTATGTGTGTTTGTCACGAGACTCGTAGTGCCAAATTATTGTTGTTATAACTCGAAGAAGAAGCTCTCAACATGTGTGGAGGTGCTATCATCTCTGACTTCATTGGTGTCAAGCGTGGCCGCAACCTCGCCGCGCAGGAACTCTGGTCCGAGCTTGACCCTTTCTCAGACCTCCTTGGCTTTGACATCACCACCGCTACCTCCAAAGATCAACCACCTCACACCCAGAACAAAAAAGTGTCAGCGTGTGAGAAGAAGAAGAAAAGCGTGGGTGCAGGTCCAGGGAAGAAGAGCGAGCGTGCTCGCAAGAACGTATACAGAGGAATCAGGCAAAGGCCGTGGGGCAAGTGGGCCGCAGAAATAAGGGACCCACACAAAGGTGTCCGCGTCTGGCTCGGCACTTTCCCCACCGCCGAAGAAGCAGCCAGAGCCTACGACCAGGCCGCCAAACGCATCCGCGGCGACAAGGCCAAACTCAACTTCCCCGCCGCCACCCCCCCGCCCTCCAAAAAGCGCTGTTTCAGCCCTTCTGATCAACAAAGCAGCACCTCACAGTCCACCGCCGTAGAGGATCTTGACCTCAAACAACTTGAATGGTTCCTTGGTTTGGACAACGACCTTCCTGCTTTTACCAACAATCCTGTCACTGCTCACTGGGACAACAACAGTAACACTTACATCCACGACGACCTTTGGATGCTCGACGACCTCGTTATGCCCAACCGTCCTCTAATTTACTAGAAGTGAATAATAACGCCATGTTTCTATAAATCAAATTAAATACTTGTACCAGAGTAATGTAAGAACATCAAATAAATTGAGATTTTTTACACATTAACATCAACTATCTAATTTTTACAGAAGTTTTCTCTCTCAACTTCTATAAATTTTAAATATACAAGTTGATTTTAATATGCAACTAAATCTCCATTTATTTTGTGTTTTTTCTTTACTTCTGTTACGGGGTCCCAGCTTAAGTTTCCTATAAATTGTATAAAACTATGTTGGTCTATGTGTTTTTAGTTTCTGTTGCTCTCGCTTTGGCAATTTCTGTTTTGGACGGTCTAATGATTTCAAATTAGGTGCATCGTATCATGGGCGGGATGATTATATATTATGATTATAAATAAAGGTGACTTAGGGCGTGTTAGTATTTGGGTCCTGTATGTTTATATATAAATAGCGTATGCGTTGTATATAAATTTATATGGTGCTACTTGTCATTTTGACAAACCTCGTTTATGATTGTGACGTTGGTGCATGCATCTATGGAAATCTGGACCAACTTCAATAATTGTCTTAAAGTGTACATGTTCAGTTAAATGTTTAATTAAG 1360 0.4294 MCGGAIISDFIGVKRGRNLAAQELWSELDPFSDLLGFDITTATSKDQPPHTQNKKVSACEKKKKSVGAGPGKKSERARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFPTAEEAARAYDQAAKRIRGDKAKLNFPAATPPPSKKRCFSPSDQQSSTSQSTAVEDLDLKQLEWFLGLDNDLPAFTNNPVTAHWDNNSNTYIHDDLWMLDDLVMPNRPLIY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03132 222 SMART rav1_2 81 144 IPR001471 GO:0003700|GO:0006355
Pste2g03132 222 CDD AP2 82 140 IPR001471 GO:0003700|GO:0006355
Pste2g03132 222 Gene3D AP2/ERF domain 81 140 IPR036955 GO:0003700|GO:0006355
Pste2g03132 222 MobiDBLite consensus disorder prediction 132 164 - -
Pste2g03132 222 MobiDBLite consensus disorder prediction 55 80 - -
Pste2g03132 222 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Pste2g03132 222 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Pste2g03132 222 FunFam Ethylene-responsive transcription factor 2 80 139 - -
Pste2g03132 222 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700|GO:0006355
Pste2g03132 222 MobiDBLite consensus disorder prediction 42 80 - -
Pste2g03132 222 SUPERFAMILY DNA-binding domain 81 139 IPR016177 GO:0003677
Pste2g03132 222 MobiDBLite consensus disorder prediction 148 164 - -
Pste2g03132 222 PANTHER DNA-BINDING DOMAIN 61 158 IPR044808 GO:0003700|GO:0009873
Pste2g03132 222 Pfam AP2 domain 81 130 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03132 Pste-Chr2 31224242 31226390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03132 1 214 AP2-EREBP Transcription Factor Family AT3G16770 45.211 3.16e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste2g03132 AP2 1.2e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03132 2 31224242 31226390 Pste2g03132 2 31224242 31226390 ECH