Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03122 ATATGGGGAGAATGGGACAAGAATCAGATTACAAAACCCAGTTGGTGTTGGAGGTTTGCTCCATTTCCACCCGTTCAGTTGCGTGTGTTCATAGACTTGTCTTAAACCCTTCTAAGCCACCTTTCATAGATTGGTATTGCATTCTTCGGGTGGAGGACAATGCAGGGGTAAATACCATTCGCAAGCAATACCATAAACTTGCTTTGCAACTTCATCCTGACAAGAATAAACACCCAAAGGCTGAAATTGCATTCAAGCTTGTCTCTGAGGCATATGTATGTCTGTCTGATGCTGCAAAAAGGAAAGCTTTTGACTTAAAGAGACAGAAGAATTTCTGTTTTGAGTGTAATAGAATTCCATATACATCCAAAAAAGCTCCTGGCAATTCCAACGGCTCAAGTTTCAAAACTTGGAATAATATTAATGGGTCAAGATCGTACAAAGTTTGGAGAAATATTACGGAAATGAGAGAAAGACTGAGGGAGGAGGCAAAGGTAATAGAGAACTGTCTGCGGGCAAATTCAATGTCAAAGAAAGAATCTTCCCTATACAATCCAGTTGACTATAGACATGGAAGCATGTTCCAGCAAAAAGTTGAGAGATCAGAAATCCCAATTTTCAATCCATTCAAACAATTGTACCAAGGGTACCCTCATTTTAGGAGTCATGTTTACAAGAATTCAGAGACATGTTATTTGGATACACAAAATCTTGTGCACACTGACAAGAAGGAAACTAAGTATGCCTCTCCGGTTTTTTATGTTAGGCCACAAAGGAGTATGTATTCAAGTAAATTTGCTTATATCCCATCACGATAC 818 0.39 MGRMGQESDYKTQLVLEVCSISTRSVACVHRLVLNPSKPPFIDWYCILRVEDNAGVNTIRKQYHKLALQLHPDKNKHPKAEIAFKLVSEAYVCLSDAAKRKAFDLKRQKNFCFECNRIPYTSKKAPGNSNGSSFKTWNNINGSRSYKVWRNITEMRERLREEAKVIENCLRANSMSKKESSLYNPVDYRHGSMFQQKVERSEIPIFNPFKQLYQGYPHFRSHVYKNSETCYLDTQNLVHTDKKETKYASPVFYVRPQRSMYSSKFAYIPSRY 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03122 272 ProSiteProfiles dnaJ domain profile. 43 107 IPR001623 -
Pste2g03122 272 SMART dnaj_3 42 99 IPR001623 -
Pste2g03122 272 CDD DnaJ 43 96 IPR001623 -
Pste2g03122 272 PANTHER BNAC03G44070D PROTEIN 24 184 - -
Pste2g03122 272 Pfam DnaJ domain 43 104 IPR001623 -
Pste2g03122 272 PRINTS DnaJ domain signature 63 78 IPR001623 -
Pste2g03122 272 PRINTS DnaJ domain signature 45 63 IPR001623 -
Pste2g03122 272 PRINTS DnaJ domain signature 79 99 IPR001623 -
Pste2g03122 272 Gene3D DnaJ domain 42 163 IPR036869 -
Pste2g03122 272 SUPERFAMILY Chaperone J-domain 32 107 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03122 Pste-Chr2 31134891 31136138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03122 43 104 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 46.970 3.45e-11 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03122 2 31134891 31136138 Pste2g03122 2 31134891 31136138 ECH
Pste6g04071 6 30004796 30006306 Pste2g03122 2 31134891 31136138 PCT