Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03109 ATATGCAATAAAATTTGAATCCAAGTAACCTATATATCCATATATCTTATTTCACCGTTGCTCTTGTTTCTTTTTTGTTATAATGGAGGCACAGAAACAGAAGATGTTTGACGAAGAAACAGCGTCGTCAGTGGTGAAGGAGCTGAGGGATAGCTTCGGTTCAGGAAAGACGCGAAGTTACGAGTGGAGAGTGTCGCAGGTGAAGGCACTATTGAAGGCGGTGGTTGAAAACGAGCAGGAGATCGTCGATGCTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCGTCGTCTACGAGATTGGTATGTTTAAAAACTCATGTGAAGTCATATTGAAGGAATTGAAACAGTGGATGAAGCCAGAAAAGGTGAAAACTTCAATCAGAACTTTTCCTTCTTCTGCTGAAATAGTACCTGAACCGTTGGTGTTGTCTCTTGATCCAGTCGTTGGAGCTATAGCAGCCGGTAATGCTGTGGTTCTAAAACCATCAGAAATTGCCCCAGCCTCATCATCACTACTAGCAAAATTGATAGGGAAGTATATGGACAACTCATTTATAAGAGTTGTGGAGGGGGGAGTTGATGAAACAACAATGCTATTGCAGCAAAAGTGGGACAAGATTTTCTACACAGGTAATGGAAAAGTGGGAAGAATAGTAATGACTGCTGCTGCAAGACACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCTCCGGTTGTTGTTGATTCAAATATGGATCTTCAGGTAGTAGCAAAACGAATAATTTCGGGCAAGTGGGGATTGAACAATGGACAAGCCTGCATTTCTCCAGATTATGTTATAACAACCAAAGACTGTGCTCCCAAGTTGGTGGATGCCCTAAAGACTGAATTGGTGAAATGTTATGGAAAGAACCCGCTGGAATCTGAAGATTTATCTCGAATTGTGAGTTCCAACCACTTTGCTCGCTTGTCAAAGCTCTTGAATGATGATAAGGTTTCTGGCAAGATTGTTTATGGAGGTGAAAGTGACGAAAAGAAATTAAGGATTGCTCCCACTGTTTTATTGGATGTTCCGCGAGATTCTCTGATAATGGGCGAAGAGATATTTGGTCCATTACTTCCCATCATCACGGTCAATGAAGTGGAAGAAAGTATAGATTTGATCAACTCAGGAACAAAGCCCCTAGCCGCGTATATATTTACAGCCGACAAGAAGCTAAAGGAGCAGTTCGTAATGAATGTTCCCGCCGGGGGTTTGCTTGTCAATGACACTGTCTTACATGTAATATTTGTTCAAACTTTGCCTATCAAAAAAAGAAAATATTTGTTCAAACTTCTAAAACTTTTCCAAGAATGCATGAATTTGTGTGTGCCTAGCTTCAAAGTTTGGAATTTAATTTCATCTGTCCTGGAGCAGCTTGTGGTTGATACATTGCCATTTGGGGGAGTTGGGGAGAGTGGAATGGGGGCATACCATGGGAAGTTCTCCTTTGATGCTTTTACACACAAAAAGGCAGTTCTGTATCGCGGTTTTGCTGGTGATTCATCACTAAGGTACCCACCATACACAGATACAAAGTTGAGGTTGATGAAGGCTCTCATCGGTGGTAGCATCTTCGGCATAATTCCTGTTGTTGATGTATCTTCGGTTCTGAAAACCAATAATGGAGACATTTTGCTTGAAGGATGTAAATACTCATCCAACAATCAAAATAAAGTTATGTCAATACGATGA 1723 0.415 MEAQKQKMFDEETASSVVKELRDSFGSGKTRSYEWRVSQVKALLKAVVENEQEIVDALRSDLAKPPLETVVYEIGMFKNSCEVILKELKQWMKPEKVKTSIRTFPSSAEIVPEPLVLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLAKLIGKYMDNSFIRVVEGGVDETTMLLQQKWDKIFYTGNGKVGRIVMTAAARHLTPVVLELGGKSPVVVDSNMDLQVVAKRIISGKWGLNNGQACISPDYVITTKDCAPKLVDALKTELVKCYGKNPLESEDLSRIVSSNHFARLSKLLNDDKVSGKIVYGGESDEKKLRIAPTVLLDVPRDSLIMGEEIFGPLLPIITVNEVEESIDLINSGTKPLAAYIFTADKKLKEQFVMNVPAGGLLVNDTVLHVIFVQTLPIKKRKYLFKLLKLFQECMNLCVPSFKVWNLISSVLEQLVVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRGFAGDSSLRYPPYTDTKLRLMKALIGGSIFGIIPVVDVSSVLKTNNGDILLEGCKYSSNNQNKVMSIR 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03109 546 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 206 213 IPR029510 GO:0016491
Pste2g03109 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 433 492 IPR016162 GO:0016491
Pste2g03109 546 FunFam Aldehyde dehydrogenase 210 406 - -
Pste2g03109 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 210 398 IPR016163 GO:0016620
Pste2g03109 546 SUPERFAMILY ALDH-like 17 401 IPR016161 GO:0016491
Pste2g03109 546 PIRSF ALDH 2 512 IPR012394 GO:0006081
Pste2g03109 546 FunFam Aldehyde dehydrogenase 22 213 - -
Pste2g03109 546 Pfam Aldehyde dehydrogenase family 9 393 IPR015590 GO:0016491
Pste2g03109 546 SUPERFAMILY ALDH-like 443 500 IPR016161 GO:0016491
Pste2g03109 546 PANTHER ALDEHYDE DEHYDROGENASE 12 509 IPR012394 GO:0006081
Pste2g03109 546 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 209 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03109 Pste-Chr2 31036562 31040302 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03109 74 514 Aldehyde Dehydrogenase Gene Family AT1G44170 60.132 0.0 556