Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03092 ATGCTCCCCCGCTTATTTTCAAGTGTCAAGTCCTCTGTAAAACTGGTTTTGTTAGATGAAGCGGATGCCATGACAAAGGATGCCCAATTTGCATTACGTAGAGTGATTGAGAAATATACAAAGAGCACTAGGTTTGCACTTATCTGCAATCATGTAAACAAGATCATTCCTGCACTTCAATCAAGATGCACTCGGTTCCGGTTTGCCCCTCTTGATGCTGTCCATGTCACTGAAAGACTGAAACATGTTATTAAGGCTGAAGGGTATGCTTCCTGTTCTCTATTATCTAGTTTGCATATGTCATTTGAATATTTTGATGCTGCTGTTCTAGTTGCTTCTGGTGGCAATGACACTTCTGGATTATGTATATGGCTTGATGTTGAAGACAGTGGCTTAGCAGCTCTCGTTCGGCTTAGTAATGGTGATATGAGAAAGGCTTTGAATATTCTTCAGTCAACACATATGGCTTCTCAACAGATAACAGAAGAAGCTGTTTACCTGTGCACTGGGAATCCGTTGCCCAAAGACATTGAGCAAATATCGTATTGGCTTTTAAATGAACAATTTGCAGATAGCTTTAAAAGAATATATGAAATGAAGACAAAGAAAGGGTTGGCCCTGGTTGATATAGTCAGAGAAGTGACAATGTTTATTTTTAAGATTAAGATGCCTTCAGCTGTTCGAGTACAGTTGATGAATGATTTGGCAGACATAGAGTACAGATTAAGTTTTGGGTGCAACGATAAGCTTCAGCTTGGATCGGTTATTGCTTCTTTTACACGTGCTAGATCAGCACTGGTTGCAGCTGCTACATAAGCCTACTTCTGAATCCGATCCATGGGGTTAAATTAACATACTATTAGGCCTGGCTTGTTTGATTTCCGTGGCAATGTCCCTACTGAGAAGAGAACGGGTTTGAGTGTAAAGTGAATGTGTTTATCGTTTATAACTCAAGATGAGTTTTAACTTTTAAGTATTTTCCCAAAATTCTGAAGTAGGACATCTGTTTTTAATTTTACTTCTTTTATATTTACTGCTATTTTTGATGAAACCATTAGTTAGGTTTTCAAAGTTACGATCAGTTCGTCTTTTTAACATCAATGCAATGAAAACCCTCGGAATGACTGGAAAGTGGTGAATGGTGAAAGGCAGATCGTGT 1159 0.3857 MLPRLFSSVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGYASCSLLSSLHMSFEYFDAAVLVASGGNDTSGLCIWLDVEDSGLAALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIYEMKTKKGLALVDIVREVTMFIFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAAT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03092 271 FunFam Replication factor C subunit 5 172 269 - -
Pste2g03092 271 Gene3D - 124 171 - -
Pste2g03092 271 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 10 253 - -
Pste2g03092 271 Pfam Replication factor C C-terminal domain 172 258 IPR013748 -
Pste2g03092 271 SUPERFAMILY post-AAA+ oligomerization domain-like 172 262 IPR008921 GO:0003677|GO:0006260
Pste2g03092 271 CDD HLD_clamp_RFC 71 169 - -
Pste2g03092 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 90 IPR027417 -
Pste2g03092 271 Pfam DNA polymerase III, delta subunit 7 71 - -
Pste2g03092 271 Gene3D - 172 269 - -
Pste2g03092 271 Gene3D - 4 70 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03092 Pste-Chr2 30888273 30900684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03092 6 270 Core DNA Replication Machinery Family AT1G77470 69.597 5.66e-130 371