Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03091 ATGGCATCAGAGCTTCAATTGCCCCCAGGGTTCAGATTCCATCCAACGGACGAGGAGCTGGTGATGCACTATCTCTGCCGCAAATGCACGTCACAGCCCATCGCCGTTCCCATCATCGCCGAAATCGACCTCTACAAATACGATCCTTGGGACTTACCAGGATTAGCTTCGTATGGAGAGAAAGAGTGGTACTTCTTCTCACCACGGGACAGGAAATACCCCAACGGTTCCAGGCCCAACCGGGCTGCTGGAACCGGCTACTGGAAGGCAACCGGGGCGGATAAGCCCATTGGTCACCCCAAACCGGTTGGGATAAAAAAAGCGTTGGTTTTTTACGCTGGGAAAGCGCCCAAAGGCGACAAAACCAATTGGATTATGCACGAGTATCGTCTCGCCGATGTTGATCGCTCCGTTCGCAAAAAGAACAGCTTAAGGTTGGACGATTGGGTGCTTTGCCGAATTTACAACAAGAAGGGCACGATCGAGAAATTACAACCAAGCAGCGATGTAGTGGTGAGCCGAAAAATGGAATCCTCGGAGATGGAAGACAAGAAACCGGAGATTCTGAAAAGCGGAGTGGGTCTTCCGCCACCGGCGCCGACGACGGCGCAAACGTCGGGAGCGATGACGGATTACATGTACTTCGACCCGTCGGATTCGATCCCGAAGCTGCACACGGACTCGAGCTGTTCGGAGCACGTGGTTTCGCCGGAATTCGCGAGCGAGGTGCAGAGCGAGCCCAAGTGGAACGAATGGGAGAAGAACCTGGAGTTTCCGTATAATTACATGGATGCCACTCTCAGCAGCAGCAGCAACAACTGTTTTGGAAGCCAGTTCCCTAACAATAATCAGATATCGCCGCTGCAGGACATGTTCATGTACTGGCCCAAACCCTTCTAA 900 0.5289 MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGTIEKLQPSSDVVVSRKMESSEMEDKKPEILKSGVGLPPPAPTTAQTSGAMTDYMYFDPSDSIPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKNLEFPYNYMDATLSSSSNNCFGSQFPNNNQISPLQDMFMYWPKPF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03091 299 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Pste2g03091 299 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Pste2g03091 299 MobiDBLite consensus disorder prediction 172 203 - -
Pste2g03091 299 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Pste2g03091 299 FunFam NAC transcription factor 16 161 - -
Pste2g03091 299 PANTHER NAC TRANSCRIPTION FACTOR 56 7 206 - -
Pste2g03091 299 MobiDBLite consensus disorder prediction 175 189 - -
Pste2g03091 299 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03091 Pste-Chr2 30857887 30859368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03091 1 299 NAC Transcription Factor Family AT1G01720 69.481 1.66e-147 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste2g03091 NAM 4.9e-39 No_clan