Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03088 CTGCACTGCTGTTCTCTGCACATCACATGTCGGTGTTCCCCATTTCCTTTATATACTGCTACAGTGTTGCATGCCTTCTCATCCATTATCCATTCAAGAGAAATTTATCAATGGGGAGAGCTCCTTGCTGTGAGAAAGTGGGGTTGAAGAAAGGAAGATGGACTGCTGAAGAGGATAAAATCTTGACTGATTACATTCAACAAAATGGTGAAGGCTCCTGGAAAACCTTGCCCAAGAATGCAGGTTTGTTGAGGTGTGGAAAGAGTTGTCGACTGAGATGGATCAATTATTTGAGATCGGACGTGAAGAGAGGTAACATCACTCCTGAGGAAGAAGAGATCATTGTCAAATTGCATGCTGTTCTTGGTAATAGGTGCGGCTTTGCGTCTTCGTGGTCTGTGATAGCTGGACATTTACCAGGAAGAACAGACAATGAGATAAAGAATTATTGGAACTCTCACCTAAGGAGAAAGATCTATTGCTTCATGAGATCTCTAAATGAGTCTCTTCCACCCATTGACATGTCTGTTGTAAACTCTACCACATCTAAGAGAAGAGGCCAAGGTTCAAAAAACAAGCCAACAATGGAAGAGGAAAAGAACATGGCTTTGAGCCAAAACTCCTATGAGTCAATGCCTAGTTGTAATAGAGAAGAAGGTGAAGAAATTTCCATGATGGATGTTCATTATGACATGGAAGGCAATGCAAGTAGTACATTTGGGTCATACCCCAATGTTGATGGTTTAAGACCATTTTATCAACAATATTGGTCTGATGATGAAATCATGAGACTTACTCACATACTTGAGAATGAGGTATTTATAAACCAAAATGGTAATAATATAACCCTTAATAAGGAGCCTAATGAAAATGATTGTGCCCAGATGCAAGTGGATGTAATGGGAACAAGTCAAGAAAGCAAGAACTATGGTGTTTGGAACTCATCCAATGGGGAAAGTGGAGAATGGTACCCTAATTATTCATCAGTGAATTCTGTCATTGATTATCAGTGGTCTGATTGGGACATGGGAGGAAGTGTTCAATCGAATAATCAATGGAACCTTTATGATGATCAAGTGATGAATTGCTTGTGGAGCACTGGAATTGGTGAAATAAATGGTTTTCATCCA 1130 0.3991 MSVFPISFIYCYSVACLLIHYPFKRNLSMGRAPCCEKVGLKKGRWTAEEDKILTDYIQQNGEGSWKTLPKNAGLLRCGKSCRLRWINYLRSDVKRGNITPEEEEIIVKLHAVLGNRCGFASSWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFMRSLNESLPPIDMSVVNSTTSKRRGQGSKNKPTMEEEKNMALSQNSYESMPSCNREEGEEISMMDVHYDMEGNASSTFGSYPNVDGLRPFYQQYWSDDEIMRLTHILENEVFINQNGNNITLNKEPNENDCAQMQVDVMGTSQESKNYGVWNSSNGESGEWYPNYSSVNSVIDYQWSDWDMGGSVQSNNQWNLYDDQVMNCLWSTGIGEINGFHP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03088 368 CDD SANT 44 89 IPR001005 -
Pste2g03088 368 MobiDBLite consensus disorder prediction 172 205 - -
Pste2g03088 368 ProSiteProfiles Myb-like domain profile. 90 146 IPR001005 -
Pste2g03088 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 150 IPR017930 -
Pste2g03088 368 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 29 209 - -
Pste2g03088 368 MobiDBLite consensus disorder prediction 190 205 - -
Pste2g03088 368 SUPERFAMILY Homeodomain-like 39 142 IPR009057 -
Pste2g03088 368 CDD SANT 99 146 IPR001005 -
Pste2g03088 368 Gene3D - 99 150 - -
Pste2g03088 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 89 IPR017930 -
Pste2g03088 368 ProSiteProfiles Myb-like domain profile. 37 89 IPR001005 -
Pste2g03088 368 SMART sant 94 148 IPR001005 -
Pste2g03088 368 SMART sant 41 91 IPR001005 -
Pste2g03088 368 FunFam Myb transcription factor 39 95 - -
Pste2g03088 368 Gene3D - 41 94 - -
Pste2g03088 368 Pfam Myb-like DNA-binding domain 42 89 IPR001005 -
Pste2g03088 368 Pfam Myb-like DNA-binding domain 95 146 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03088 Pste-Chr2 30826700 30835181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03088 29 217 MYB Transcription Factor Family AT2G47460 57.071 4.10e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste2g03088 Myb_DNA-binding 1.9e-12 CL0123