Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03052 TGAGATCGTCAATTTCGTGCCTCATAGAAGGCTAATCCTTCACTAAATAAGTGTTCAGTGGTGTATAACATTTTGCACCATGTCTTCTCTCTTTGCTAGAAACCAGAGGTTCTCCTTGGTTGTTCTCCTGCTTCTTTTATTGACCGGAAGCCTTCGCATGGCAGCAGATGCTCAAATTGGTGTTTGTTATGGCATGATGGGAAACAATCTACCACCTACAAATGAAGTTATAGATCTTTACAGGTCAAATAACATAAGGAGAATGAGACTCTATGATCCTAATCAAGCTGCTTTACAAGCACTTAGAAATTCCGGCATTGAACTCATTCTTGGTGTGCCAAACTCGGACCTTCAGGGTCTTGCTACCAACGCAGACACTGCTCGTCAATGGGTGCAAAGAAACGTATTAAACTTTTGGCCTAGTGTCAAAATCAAGTATATAGCAGTTGGAAATGAAGTGAGTCCCGTTGGTGGGTCCTCTTGGCTAGCCCAATATGTTCTACGCGCTGTCCAAAATGTGTACCAAGCTGTAAGGGCTCAAGGCCTTCATGATCAAATCAAGGTTTCAACTGCTATTGACATGACCCTAATAGGAAACTCCTACCCCCCATCAAAAGGTTCCTTTAGAGGTGATGTGAGGTCATATCTAGACCCCATAATTGGGTACTTGTTATATGCCAGCGCACCATTATTAGTCAATGTGTACCCTTACTTTAGTTACAGTGGTAATCCTCGTGACATATCACTTCCCTATGCACTTTTTACTGCTCCAAATGTTGTTGTATGGGATGGTCAATATAGGTACCAAAATCTATTTGATGCTATGTTGGATTCAGTACATGCAGCCATTGATAACACTGGGATTGGTTATGTAGAGGTTGTTGTATCCGAGAGTGGGTGGCCATCAGAAGGAGGGTTTGGCGCCACTTATGACAACGCGCGTGTGTATTTGGATAATTTGGTTCGTCGTGCTAGTAAAGGTAGCCCAAGAAGGCCTTCAAAGCCCACAGAAACTTATATATTTGCCATGTTCGATGAGAATCAAAAGAGTCCCGAGATAGAGAAACATTTTGGGCTATTCAATCCCAACAAACAAAAGAAGTACCCATTTGGGTTTGGTGGAAAACGGAATGCGCAAGTTGTTATTGATGACTTCAATACAACAACTCCTCTTAAGAGTGACATGTAAGATCGGAATCCTGCTCCTCAAAGTTTATGTTATTCCGCCCACAAAATAAAGAGAAAATATGTTGTTTGATAGAAATATTTAGCCTTTATTTTTGAATGAAAAAAACAGTGCAAATGTGATCAATTATAAAAATGAAACTATGACTAAC 1337 0.4076 MSSLFARNQRFSLVVLLLLLLTGSLRMAADAQIGVCYGMMGNNLPPTNEVIDLYRSNNIRRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNADTARQWVQRNVLNFWPSVKIKYIAVGNEVSPVGGSSWLAQYVLRAVQNVYQAVRAQGLHDQIKVSTAIDMTLIGNSYPPSKGSFRGDVRSYLDPIIGYLLYASAPLLVNVYPYFSYSGNPRDISLPYALFTAPNVVVWDGQYRYQNLFDAMLDSVHAAIDNTGIGYVEVVVSESGWPSEGGFGATYDNARVYLDNLVRRASKGSPRRPSKPTETYIFAMFDENQKSPEIEKHFGLFNPNKQKKYPFGFGGKRNAQVVIDDFNTTTPLKSDM 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03052 369 SUPERFAMILY (Trans)glycosidases 33 345 IPR017853 -
Pste2g03052 369 Gene3D Glycosidases 32 347 - -
Pste2g03052 369 Pfam Glycosyl hydrolases family 17 33 344 IPR000490 GO:0004553|GO:0005975
Pste2g03052 369 FunFam glucan endo-1,3-beta-glucosidase, basic 33 346 - -
Pste2g03052 369 ProSitePatterns Glycosyl hydrolases family 17 signature. 265 278 IPR000490 GO:0004553|GO:0005975
Pste2g03052 369 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 346 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03052 Pste-Chr2 30522380 30524103 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03052 39 355 Glycoside Hydrolase AT4G16260 63.009 1.20e-144 410