Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03043 ATGTACCATGTCAGTTTCATTACTGATGAAAATCCTAGCTCATCCAACGATATTTTCTGGGCTAATGAGGGAATGAATGAAATGAGAAAGGTTCAATTATCAGGAGCTGAAGATCATGGAAAGTACATCGGAATTGACTCATTTTACTCTAATTTAGGGTTCTTTCCAGATGATCCATCAGTAGAAGGATATATTCTATCCACTAAACAACAAAAGTATAACCCGCAACAATCATATCATGAGTATCGAAGATTGGATGATCTTCAGTTTGACATGGTCTCACCAACACTCCAATTTGATGCACAATATCCAACCATGGTTCCACTATATGACCCAGCAAAAGACAAGCCACACTCAACTACACTTTTAGCCTCACTCGAGATCTTGAACAACTATGGCAAGGGCTTCAAGCGATTAAGAAAAGGAGGCAACACCCAGCATCCAGTTGATGATGTGGCTGTGGCCACAAATGAAGGTATTTGGAGAAAGCTCTCAACAGAAGATATCATGAGGATAGCAGGAACAAGGTTCATCCAATCATCATCATCTTCGGAGTCAAAATTTTTGCCTTTCTTGGAAACTCACCCTTTTGGCTTTTCCTTCTCTGGAGTCTCTGATGAGGAAAAGGAGGATGTGGAACTTGCCGAGTCTCTTTTGGCTTCTGCTGAGAAAATTGGCAATCAACAGTTTGAACGTGCAAGCAAATTGCTAAGTCATTGTGAATCGTTGTCCTTCAAAACTGGGAGCCCCGCTAAGCGTATTGTTCATTGGTTTGCTGAAGCACTTCGCCACAGGATAGATAGAGAAACAGGAAGAGTTTCATCCAAGGATTTGCAAAAGGATGAGTCATTTGATCCAGAAGAGGCAGCCAAGGGACTAAACCCCACTATTTTAGCATTTTATGAAGAGCTTCCCTTTTGTCAAATTTCAGTGTTGACGGCTGTTCAAGCTATAATAGAAGATGTAGATGATGCAAAGAAGATTCATGTTATTGATCTAGAAATCAGAAAGGGGGGGCAATGGACTATCCTAATGCAAACCCTTGCGTCTAGAAATGAATATTGTCCCATTGAGCTTCTAAAGATAACTGCTGTTGAAAGTGGAACAACTACACACATAGTCGAGGACACTGGTAAAAGACTAAAAGACTATGCTCAAGGTTTGAACATTCCCTTCTCTTACAATATAGTTATGGTATCAGACTTGTTACATCTAAGAGAAGATCTTTTCGAAATTGATCCTGAGGAAACAATTGTTGTTTATTCTCAGTTTGCACTTAGAACCAAGATTCAACAATCGGACCAGCTTGAAACCATCATGAGAGTGATTAGAACCTTGAGTCCAAATTTAATGGTAGTAGCTGAAATTGAGGCAAACCACAACTCTACATCTTTTGTAAACCGTTTCATTGAGGCTCTTTTCTTCTTCAGTGCATTCTTTGATTGTCTTGAGGCGTGCATGAAAGAGGATGAGAAGAACCGAAGGATTCTAGAATCCCTTTACTTCGGTCATGGAATCAGGAATATTGTGGCTGCAGAAGGAGCAGAAAGAAAGACTAGAAATGTGAAGATTGATGTGTGGAGGGCCTTCTTCTCCCGCTTTGGAATGGTGGAGAAAGAATTGAGCACATTGTGTTTATACCAAGCAAAATTGGTGGCTAAAAGATTTCCTTGTGGAAGTTTTTGCACGTTTGATAAGAATGGGGATTGCCTTCTTGTTGGATGGAAAGGTACTCCAATTAACTCTCTTTCTGTCTGGAAATTCCTTTGA 1770 0.4017 MYHVSFITDENPSSSNDIFWANEGMNEMRKVQLSGAEDHGKYIGIDSFYSNLGFFPDDPSVEGYILSTKQQKYNPQQSYHEYRRLDDLQFDMVSPTLQFDAQYPTMVPLYDPAKDKPHSTTLLASLEILNNYGKGFKRLRKGGNTQHPVDDVAVATNEGIWRKLSTEDIMRIAGTRFIQSSSSSESKFLPFLETHPFGFSFSGVSDEEKEDVELAESLLASAEKIGNQQFERASKLLSHCESLSFKTGSPAKRIVHWFAEALRHRIDRETGRVSSKDLQKDESFDPEEAAKGLNPTILAFYEELPFCQISVLTAVQAIIEDVDDAKKIHVIDLEIRKGGQWTILMQTLASRNEYCPIELLKITAVESGTTTHIVEDTGKRLKDYAQGLNIPFSYNIVMVSDLLHLREDLFEIDPEETIVVYSQFALRTKIQQSDQLETIMRVIRTLSPNLMVVAEIEANHNSTSFVNRFIEALFFFSAFFDCLEACMKEDEKNRRILESLYFGHGIRNIVAAEGAERKTRNVKIDVWRAFFSRFGMVEKELSTLCLYQAKLVAKRFPCGSFCTFDKNGDCLLVGWKGTPINSLSVWKFL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03043 589 Pfam GRAS domain family 215 587 IPR005202 -
Pste2g03043 589 ProSiteProfiles GRAS family profile. 205 587 IPR005202 -
Pste2g03043 589 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 182 576 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03043 Pste-Chr2 30411375 30413144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03043 206 588 GRAS Transcription Factor Family AT3G03450 30.469 1.04e-55 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste2g03043 GRAS 7.5e-89 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03043 2 30411375 30413144 Pste2g03043 2 30411375 30413144 ECH