Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03042 ATGGATAGAGAAACAAGAAAAGTTTCACCCAAGGATTTGCAAAAGGGTCAATCATTTGATCCTAAAAAGGCAATCAAGGAAGTAAACCCCACTATTGTTGCATGTTCTGAAGAGCTTCCTTTCTGTCAAATAACAACCTTTATTGCAGCTCAAGCAATAATAAAAGATGTAACAGAAGCAAAGAAAATTCATGTTATTGATCTTGAAATAAGAAACGGGGAACAATGGACTAGTCTAATGCAAGCCCTTAAGTCAAGACATGAATGTCCAATTGAGCTTCTAAAGATAACCGTTGTTGAAAATGGAGACACTAGACACATAGTTGAGGGCACTGAAAGGAACACCAATTTGCTCTGTTTCTATCTGGAAATTCCTTTGATAAACAAGGCTATAAAAATCAGTCCAATATTGGGATTTTGGTCAAAGTGTCAAGAATTGCTTGGTTCTCCACGAGCAATTGCAGCCACATCAATCAAATTTGTCAATAACTCTCATCAATGTTAA 504 0.3631 MDRETRKVSPKDLQKGQSFDPKKAIKEVNPTIVACSEELPFCQITTFIAAQAIIKDVTEAKKIHVIDLEIRNGEQWTSLMQALKSRHECPIELLKITVVENGDTRHIVEGTERNTNLLCFYLEIPLINKAIKISPILGFWSKCQELLGSPRAIAATSIKFVNNSHQC 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03042 167 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 34 122 IPR005202 -
Pste2g03042 167 ProSiteProfiles GRAS family profile. 1 167 IPR005202 -
Pste2g03042 167 Pfam GRAS domain family 35 111 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03042 Pste-Chr2 30402263 30403359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03042 37 90 GRAS Transcription Factor Family AT3G03450 46.296 9.59e-10 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste2g03042 GRAS 1.7e-17 CL0063