Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03023 ATGGGAACCCCAGAAGAAGGAGAAGAGCTTTTCAAGAAGATAGAACTGTTAGAAGCTGGTCACGCTCACCTCCACCAACAAATGTCCAACTTCAAGCTCCTCCAACACCACAAGTCTCGTTCCAGATTTAGTGCTGCCACTTCTAAGAGACCCTCTTCTTCTCTGCATCAAAATGGAAACAAGTATCTCAACATCTTGCAGTCAATGGGCCACTCTGTTCATGTGTTGGATCTCCAATGCCGTATTATGTACTGGTGTGTAGTTATTTTGATGCTTCTTCAATTTTGGGCATGTGGGGTGTTCATTTTTGTTGCATATCAATGGAACCCTAGTGCTGAAAATCTGTACGGTTATGCAGCAGAAGAAGTTCTTGGGCAGGATGGGATTGAGATGCTTGTGGATCCCAGGGATTTTGCCTTAGCTAATGATGTGTTTAACAGTGTTAAAATGGGAGAGAGTTGGAGGGGCCAGTTCCCTGTTAAGAATAAGAAAGGGGATAGGTTCTATGCTGTGGCTACCAATACACCTTTCTATGATGATAATGAAAGCTTGGTTGGGGTTATTTGTGTCTCCTGTGATTCACGGCCTTTTCGTGAAACCAGAATTCCCTTTTCAGGTGGAAAGAATACGGAACCGGATTTGGGTTCTGACAGTCGTAGGTGTAGCATTTCAGATAAACTTGGCCTTGACTCTCAGCGGCCACTTCAAGTTGCTCTGGCATCGAAAATTTCAAATTTGGCGTCAAAGGTGAGTAACAAAGTTAAGTCTAGAATCCGGACAGGAGAAAATAGTGTCAACCGCGAGGATGGGAGCAAAGAAAGTCATCGTTCTGACCATAGTTTCGTTGACTCTGTTCTTTCTGACCAGAGAGAGGATGGTAATTCGAGTGGAGCTAGCACACCCAGAGGAGAGGTGCTAAAATCTCCTTTTGGTGTATTTTCTCATGTTGAAGACAAATCCCAAAGAAAAACTGTGAGAGACTCGGGTGATCAGAGTGAAGGGAAGCCTATTCACAAGATCATTACTTCTAACGCTGAAACATGGATTCAAAAGAAAACATCATCATGGCCTTGGAGAGCAAATGATCACGAAGGATCTGAGGCAAAAAATGTTCGTGTTGCTTGGCCTTGGTTGCAGGGTGATCAAGAGAATGAGTCAATTAATCAGAAAAACCTTTCTTCTGGGTTGAAGCCAGAAAGCCTTACAGGTGAAAGTAACCAACCTGTTAATAACGAGGCTTCCGGATCATGGTCCTCCTTTGTTAATGTTAACAGTACAAGTAGTACCAGCAGCTGTGGCAGTGGCAGCAGTTGTGCTGCCAATAATAAAGTGGATGTTGACTCTGATTGCTTGGATTATGAAATTTTGTGGGAGGACTTGACAATTGGAGAACCAATTGGGCAAGGTTCTTGTGGAACTGTATATCATGCTCTGTGGTATGGATCGGATGTTGCTGTGAAGGTTTTCTCAAAGCAAGAATACTCAGATGATGTGATACTGTCCTTCAGACAAGAGGTGTCTGTCATGAAAAGACTTCGTCATCCAAACATTGTTCTCTTTATGGGGGCTGTGACTTCACCTCAACATCTATGCATTGTAACTGAGTTTCTCCCACGGTTTGTCCTGGGAAGCTTGTTTCGTTTGCTTCAGAGGAACACATCCAAACTTGACTGGAGACGGCGAGTTCATATGGCCTTAGATATTGCACGAGGTGTAAATTATCTTCATCATTGCAATCCCCCTATCATCCATCGCGATTTGAAATCTTCAAATATTCTAGCTGATAAGAATTGGACTGTGAAGGTCGGAGATTTTGGTCTTTCACGTCTTAAACATGAAACATATCTCACTACTAAGACAGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAGTGAACTGTCAGATGAGAAGTCTGATGTTTACAGCTTTGGGGTGATATTGTGGGAACTTACAACTGAAAAGATTCCTTGGGATACTCTCAACCCAATGCAGGTTATTGGAGCTGTAGGGTTTATGAACCATAGGCTAGAAATTCCAAAAGATGTTGATTCACAGTGGGCTTCTATAATAGAGAGCTGCTGGCACAGTAATCCAGCTTGCCGACCAACATTCCAGGAACTTGTGGAAAGGCTGAGAGAGCTTCAGAGACGATACACAATTCAATTCCAGGCAGCTCGATCTGGTGTTGAGGAAGGCACTCAAAAGGAGTTCTAGCTAGTAGCCGCAATCTTTGAGCTTGATTCCTTTTTATCACTAACAGCATAAGGAATTTTTCGCGTATACAAATACAATACAAAACATTCCTGATGAGTAGATGTGTTGATAGAAATAGATGGTTTTAGAGTCCTGCCGATTTTGGTTCATCAACATTGTCCAGTTGTCACCCTATAAGTAGGAAAATGGTTCCATATTAGTTCAGTGATGCTTTTAGTTGGGAATAAGTTCAAATTATCATCGTTGTAATTTTGTATGGAAAATGTTTGTATGTACCCCTTTTAGTTGTATAGAAAGAAGTTCAAAAGAACAAAATAAATCAGTATAGGTAGGAAAGTGAGGAATAGTAGAAAGTAGAAACATACTAAGTTCAGAGAGAATTTGAGGATTTCTGAAACTCATTGTATATTAAACTTGAGTTTATTGATTACATGGAAAAGCCTTTATAGTTGTAGGGATATCACTAATCTTTTAGATCTGTAATAGCCATACAGTTAAGAGGACTGAAGTCAGTTACAACAGATTCCAGAACCTTCTCTTATATTCTAACCAGTAACTAACTCAAATTGGCATTCCATGAAGAATGTGTATCATTAGAAATTGAAAAACTAGTCATGTGATTATAAGATAGGTGTAATTTGCTGTCCAAAAAGGATGGGTGTAATTTGAG 2896 0.4102 MGTPEEGEELFKKIELLEAGHAHLHQQMSNFKLLQHHKSRSRFSAATSKRPSSSLHQNGNKYLNILQSMGHSVHVLDLQCRIMYWCVVILMLLQFWACGVFIFVAYQWNPSAENLYGYAAEEVLGQDGIEMLVDPRDFALANDVFNSVKMGESWRGQFPVKNKKGDRFYAVATNTPFYDDNESLVGVICVSCDSRPFRETRIPFSGGKNTEPDLGSDSRRCSISDKLGLDSQRPLQVALASKISNLASKVSNKVKSRIRTGENSVNREDGSKESHRSDHSFVDSVLSDQREDGNSSGASTPRGEVLKSPFGVFSHVEDKSQRKTVRDSGDQSEGKPIHKIITSNAETWIQKKTSSWPWRANDHEGSEAKNVRVAWPWLQGDQENESINQKNLSSGLKPESLTGESNQPVNNEASGSWSSFVNVNSTSSTSSCGSGSSCAANNKVDVDSDCLDYEILWEDLTIGEPIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSVMKRLRHPNIVLFMGAVTSPQHLCIVTEFLPRFVLGSLFRLLQRNTSKLDWRRRVHMALDIARGVNYLHHCNPPIIHRDLKSSNILADKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRSELSDEKSDVYSFGVILWELTTEKIPWDTLNPMQVIGAVGFMNHRLEIPKDVDSQWASIIESCWHSNPACRPTFQELVERLRELQRRYTIQFQAARSGVEEGTQKEF 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03023 741 Pfam PAS fold 107 190 IPR013655 GO:0005515
Pste2g03023 741 MobiDBLite consensus disorder prediction 316 334 - -
Pste2g03023 741 SUPERFAMILY PYP-like sensor domain (PAS domain) 107 193 IPR035965 -
Pste2g03023 741 CDD PAS 108 193 IPR000014 -
Pste2g03023 741 MobiDBLite consensus disorder prediction 385 415 - -
Pste2g03023 741 Gene3D Phosphorylase Kinase; domain 1 453 537 - -
Pste2g03023 741 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 277 719 - -
Pste2g03023 741 FunFam PAS domain-containing protein tyrosine kinase family protein 541 732 - -
Pste2g03023 741 ProSiteProfiles Protein kinase domain profile. 460 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03023 741 Pfam Protein tyrosine and serine/threonine kinase 460 715 IPR001245 GO:0004672|GO:0006468
Pste2g03023 741 Gene3D Transferase(Phosphotransferase) domain 1 542 728 - -
Pste2g03023 741 ProSiteProfiles PAS repeat profile. 108 152 IPR000014 -
Pste2g03023 741 MobiDBLite consensus disorder prediction 260 286 - -
Pste2g03023 741 Gene3D PAS domain 104 195 - -
Pste2g03023 741 MobiDBLite consensus disorder prediction 287 302 - -
Pste2g03023 741 SMART serkin_6 460 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g03023 741 SUPERFAMILY Protein kinase-like (PK-like) 450 715 IPR011009 -
Pste2g03023 741 NCBIfam PAS domain S-box protein 107 190 IPR000014 -
Pste2g03023 741 CDD STKc_MAP3K-like 466 715 - -
Pste2g03023 741 MobiDBLite consensus disorder prediction 252 340 - -
Pste2g03023 741 FunFam PAS domain-containing protein tyrosine kinase 453 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03023 Pste-Chr2 30206561 30213112 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03023 7 737 MAP Kinase Kinase Kinase AT3G06620 55.626 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pste2g03023 PK_Tyr_Ser-Thr 4.8e-66 CL0016