Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03020 CTTGATGGAAAAACAGTCGCTGACTCTCCTATGTTAACTCAAAAGTTAGGAATCAATCGCACCATTAAAGTAGATATCAATGGCAATGGGGAGTTCAAATCTATCCAAGCCGCCATAGATTCCATTCCTGCAGATAATACTAATTGGGTAATTGTCCATGTTAGAAAAGGAATATACAGAGAAAAGGTGCACATACCAGAAAATAAACCTTATATATTCATGAGAGGGAATGGGAGAGGAAAAACAGCCATAGTTGAGTCTCAGAGCTCCGAAGACAACGTTGCTTCTGCCATCTTCAAAGTTGAAGCACACGATTTCATTGCCTTTGGAATTAGCTTCAAGAATGAGGCACCTACGGGAATTGCCTATACCTCACAAAACCAATCCGTGGCAGCATTTGTGGCAGCAGACAAAGTGGCATTTTATCACTGTGCATTCTTCAGTACTCATAACACCCTCTTCGATTATAAAGGCAGGCATTACTATGACCATTGCTACATTCAAGGCTCAATTGACTTCATATTCGGTCGTGGAAGATCGATCTTCAATAATGCTGAAATATTTGTGGTAGATGATAAAAGGATAAAGATTCGAGGTTCAATCACAGCTCAAAATAGGGAAAGTGAAGGTGAGATGAGTGGGTTTGTCTTCATTAAGGGCAAGGTTTATGGCATTGGAGGGGTGTACCTAGGAAGGGCCAAGGGTCCTTATTCTAGGGTGATTTTTTCCCAGACATATCTCTCTATTACCGTTGTTCCAGAGGGATGGACCAATTGGAGCTATGATGGTAGCACAGAAAATCTATGCCATGGGGAGTATGAATGTCATGGACCTGGAGCCGTGACAGAGGGACGCGCTCCTTGGTCAAGGCAGCTAACTAAGGAGGAAGTTGCTCCTTATATATCTATTGATTACATTGATGGCAAGAATTGGTTACCAGTATGGGTATAATTTTTGTACATGTGGACAAGCTTTTAGATGGAAAATGAAGGATATAGATATCAAAGGGACTCTTGAAATGTCAAGTTGGATTTTCAGCAAAAGCTTAATTGTGTACCTAGTCACTTTGTC 1071 0.4108 LDGKTVADSPMLTQKLGINRTIKVDINGNGEFKSIQAAIDSIPADNTNWVIVHVRKGIYREKVHIPENKPYIFMRGNGRGKTAIVESQSSEDNVASAIFKVEAHDFIAFGISFKNEAPTGIAYTSQNQSVAAFVAADKVAFYHCAFFSTHNTLFDYKGRHYYDHCYIQGSIDFIFGRGRSIFNNAEIFVVDDKRIKIRGSITAQNRESEGEMSGFVFIKGKVYGIGGVYLGRAKGPYSRVIFSQTYLSITVVPEGWTNWSYDGSTENLCHGEYECHGPGAVTEGRAPWSRQLTKEEVAPYISIDYIDGKNWLPVWV 316
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03020 316 Pfam Pectinesterase 23 308 IPR000070 GO:0030599|GO:0042545
Pste2g03020 316 Gene3D - 16 315 IPR012334 -
Pste2g03020 316 ProSitePatterns Pectinesterase signature 2. 167 176 IPR033131 -
Pste2g03020 316 SUPERFAMILY Pectin lyase-like 18 314 IPR011050 -
Pste2g03020 316 FunFam Pectinesterase 17 316 - -
Pste2g03020 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 19 312 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste2g03020 Pste-Chr2 30180733 30182293 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03020 19 312 Carbohydrate Esterase AT5G47500 37.500 4.41e-69 218