Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03011 ATGGCAATTGGTCCAAACGTGCTAGGTGAAAGAGGAAGCCAGATATATCTTTTGGTGCTAAAGGGAAATCAGAACAGCAACAAGAAAGTAGTCCACTTGAAACATTTTCTATTCACCGAAGAAAGTTCTTTGCACTTGCAGCCATCTATAATGGTTAAGTCAGAGCACAAGATCAAAACAGAAGCTTCATCAAAGGTAATGCGGTCTTTATCTCCGTCTTCATCCTCATCCACAGCATCGGCATCAGATAGCAAGAAGAAGAAGTACAAGGGAGTGAGAATGAGGAGCTGGGGGTCATGGGTGTCAGAGATTAGAGCACCAAACCAGAAAACAAGAATATGGTTAGGTTCTTATTCAACTCCAGAGGCTGCAGCAAGAGCCTACGATGCTGCACTTCTATGCCTTAAAGGCTCCTCAGCAAATCTTAATTTCCCTTTAAGCTCTTCACAATTTATTCCTGGAGATGCTGTTATGTCCCCCAAATCAATCCAAAGAGTTGCTGCTGCTGCTGCAAATAGTTTCATTGACAATGCGACCAATCCCCCTTCCCCACCTCCAGCTTCAACCTCATCATCATCATTGGTCTCATCTCCCTCGGATCAAATGGATGATGATTCCTCACTAATATCGTCTTTTGAGGCCTACGCTGGTTGTGGTCAAGCAAATGAATCAATGGTTGTGAATGTGATGGAACCTTGGTACACCTTTGCTGATGGTCTTCAATCCCCTAAGTATGCTGATCAGATGTTAAGTAGCGCTTTCTTTGACGTTGATTCGTCCCATCTGCTTGATGATCTATACGAAGAAAGTGACATTCGTTTGTGGAGCTTCTGCTGA 837 0.4361 MAIGPNVLGERGSQIYLLVLKGNQNSNKKVVHLKHFLFTEESSLHLQPSIMVKSEHKIKTEASSKVMRSLSPSSSSSTASASDSKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPLSSSQFIPGDAVMSPKSIQRVAAAAANSFIDNATNPPSPPPASTSSSSLVSSPSDQMDDDSSLISSFEAYAGCGQANESMVVNVMEPWYTFADGLQSPKYADQMLSSAFFDVDSSHLLDDLYEESDIRLWSFC 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03011 278 MobiDBLite consensus disorder prediction 64 82 - -
Pste2g03011 278 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 73 213 - -
Pste2g03011 278 ProSiteProfiles AP2/ERF domain profile. 88 145 IPR001471 GO:0003700|GO:0006355
Pste2g03011 278 MobiDBLite consensus disorder prediction 175 205 - -
Pste2g03011 278 MobiDBLite consensus disorder prediction 189 205 - -
Pste2g03011 278 SUPERFAMILY DNA-binding domain 88 147 IPR016177 GO:0003677
Pste2g03011 278 Gene3D AP2/ERF domain 87 147 IPR036955 GO:0003700|GO:0006355
Pste2g03011 278 CDD AP2 87 147 IPR001471 GO:0003700|GO:0006355
Pste2g03011 278 Pfam AP2 domain 88 137 IPR001471 GO:0003700|GO:0006355
Pste2g03011 278 PRINTS Ethylene responsive element binding protein signature 111 127 IPR001471 GO:0003700|GO:0006355
Pste2g03011 278 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700|GO:0006355
Pste2g03011 278 SMART rav1_2 88 151 IPR001471 GO:0003700|GO:0006355
Pste2g03011 278 MobiDBLite consensus disorder prediction 62 87 - -
Pste2g03011 278 FunFam ethylene-responsive transcription factor ERF014-like 87 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03011 Pste-Chr2 30124007 30125396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03011 51 277 AP2-EREBP Transcription Factor Family AT1G21910 47.200 1.00e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste2g03011 AP2 4.1e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03011 2 30124007 30125396 Pste2g03011 2 30124007 30125396 ECH