Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03002 GACACATCACCTTCCCCATTCATCATCATCTCTTCTCACACCCTACTATTTTCATTTCCATTTCCATTTCCATTTCCATTTCCATTTGCATTTAATGTTACATTAGACACAACATATCCTCTTCCACTTGCACTCCCTCAGTTAAAACAGAAAACAGAAAACAGAAAACAGAAAACAGAAAACAGAAAACAGCAACCTTGTAGGATGTCGTCATCTGTGATCACGGATCGTTCACGTGACACCCACAGGACTAAGAAGAAGAAGAAATCAGGAAAACACAGTCAGCAGAGCCAAGGCAAATGGAAATCCCAGGCGCAGCAGCAGCTATACTCCACGAAGCTCCACCAGGTGTTGAGCCGGGTAAACGTATCGGGGGACGCGCCTCGACGGAGCAGGGCGGTAAGGGAGGCCGCGGACAGAGTGCTGGCGGTGGCCGCCAGGGGGAGGACACGGTGGAGCCGCGCCATCTTGACGAACCGCCTGAAGCTGAAGTTCAGGAAGGGGCATCACAAGAGGCAGAAAGTGGTTGGGCCTAGCCGCCAGAAGAAGCCTCGATTCAGCGTTCTCCGCCTCAAGGGTAAAACCTTACCCTCTGTTCAGCGCAAAGTTAGGCTCCTTGGCCGCCTCGTTCCCGGTTGCAGAAAAGAACCTCTTCCTGTCATTCTCGAAGAAGCCATCGATTACATACCCGCCCTTGAGATGCAGGTCAGAGCCATGGCTGCTCTCGCTCACTTACTCCTCCCCTCT 747 0.5181 DTSPSPFIIISSHTLLFSFPFPFPFPFPFAFNVTLDTTYPLPLALPQLKQKTENRKQKTENRKQQPCRMSSSVITDRSRDTHRTKKKKKSGKHSQQSQGKWKSQAQQQLYSTKLHQVLSRVNVSGDAPRRSRAVREAADRVLAVAARGRTRWSRAILTNRLKLKFRKGHHKRQKVVGPSRQKKPRFSVLRLKGKTLPSVQRKVRLLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMAALAHLLLPS 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03002 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 202 245 IPR036638 GO:0046983
Pste2g03002 249 CDD bHLH_AtIBH1_like 188 237 IPR044549 GO:0006355
Pste2g03002 249 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 103 246 IPR044660 GO:0006355
Pste2g03002 249 MobiDBLite consensus disorder prediction 49 106 - -
Pste2g03002 249 MobiDBLite consensus disorder prediction 81 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03002 Pste-Chr2 30076579 30077383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03002 100 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 56.250 1.82e-49 160
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03002 2 30076579 30077383 Pste2g03002 2 30076579 30077383 ECH
Pste6g03971 6 28988831 28990058 Pste2g03002 2 30076579 30077383 PCT