Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02998 GGTAGAAGTAAGAGGGGAGTTGTTTTAGAGTTGGGAGCAAGATCTCGAAAAAATAAAGGGAAAAATAAGGAAGAATATGTGCGACGCTTTGTGTTGTTGATATATAGCGGAAAGAGTGAACGAAAATCAATGGCGGAGGAGAAAAGAGAAGAGGAAGAGCAGCCGAACAACTCATCATCCAAGAGCATGGCATTTTCCGATGAGATATCGAACAACTTCACTTTCCCTTTTCAGCCTACGAGCATGTTAGAAATCATGCCCTCTTCCTTAGCCTTCATGGACCTGCTCGCTGGATACGACTACAACTCACAGTTATTCGATTCCCTCCCTGCCCCCGTCAACCGCCCTCTTCCCTCGCCCTCCACCTCCAACCTCCCTGACTCCTCCGATGTCTTCAACACTCCCGCCTCCCCCAATTTGTCCTCCATTTCTTCTTCTTCTAATGAGGCCACTCTCATCCCCCCCCCACTGTTAGACGCTGCTAATGGACCCAGAGCACATCCTGACCACACCACTAACAATCAGCTGAAACCGAAGAAGAAGAATCAAAAGAAGCAAAGAGAACCGCGATTTGCGTTCATGACAAAGAGCGAGGTTGATCACCTAGACGATGGTTATAAGTGGCGCAAGTACGGCCAAAAAGCTGTGAAAAACAGCCCTTATCCCAGGAGCTACTACCGTTGCACCAGCGCTGGTTGCGGCGTTAAGAAGCGCGTGGAGCGTTCCTCCGAGGACCCTTCCATTGTGGTTACAACCTACGAGGGCCAGCACACTCACCCGTGCCCTGCTTCGGCTAGGCCTAGCTTCGGGTTCGGACACGCCGTTTCCTTTGGTTCCCCAAACTTCCTGCTGCCACATCACCACCACCAGCAATCACAACCATCGTCTTTCATATATGACTCCACCCCTCCTCCTTTCAGCGTTGTTAACTCCGCTAGTAATAACTACACCAACACGACGTCGTTTTCTGGCTTTTTTCAGGATTACTCCAATCGTCGTGTTTTTGGTAATGACCCTTTGTTGAGGGACAATGGGCTGCTTCAGGACATTTTTGTGCCATCGCAGGTCAGGAAGGAGGAGAAGGATTAGTCTGTTACCAATTTTTTTGTGTTTATATTTATTGCCTTCCGGAAATTGGTAATCCTAATTAATTACTATTAATTTGTTTTATTATGGCCTGTTTCATCCTACTGCTTCGTATGGTTTGTAATGCTCTCTAACTCCATTCCTCAGCTAGATTTGAGTTCTTATGAAACCTTTTCCAGGTTCACTTTTCAAATGACTACTGCCCTTGTACCTTATAAAGGGCCTAAGCTTCTAATTTTAATTTGTTAATTTAATTATTATTCTTTTTCCTTTCGCTTTATACGTATGGCCTATGGGATATTCTTTGTAACTAGACATCTGTTCCATGATCAGACATTTCATGTTTCAAAC 1437 0.4558 MAEEKREEEEQPNNSSSKSMAFSDEISNNFTFPFQPTSMLEIMPSSLAFMDLLAGYDYNSQLFDSLPAPVNRPLPSPSTSNLPDSSDVFNTPASPNLSSISSSSNEATLIPPPLLDAANGPRAHPDHTTNNQLKPKKKNQKKQREPRFAFMTKSEVDHLDDGYKWRKYGQKAVKNSPYPRSYYRCTSAGCGVKKRVERSSEDPSIVVTTYEGQHTHPCPASARPSFGFGHAVSFGSPNFLLPHHHHQQSQPSSFIYDSTPPPFSVVNSASNNYTNTTSFSGFFQDYSNRRVFGNDPLLRDNGLLQDIFVPSQVRKEEKD 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02998 319 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 79 248 IPR044810 GO:0003700
Pste2g02998 319 SUPERFAMILY WRKY DNA-binding domain 151 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g02998 319 MobiDBLite consensus disorder prediction 77 109 - -
Pste2g02998 319 FunFam WRKY transcription factor 57 145 219 - -
Pste2g02998 319 Gene3D WRKY domain 137 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g02998 319 MobiDBLite consensus disorder prediction 1 22 - -
Pste2g02998 319 Pfam WRKY DNA -binding domain 160 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g02998 319 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g02998 319 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g02998 319 MobiDBLite consensus disorder prediction 74 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02998 Pste-Chr2 30011778 30014086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02998 66 317 WRKY Transcription Factor Family AT2G47260 44.891 2.72e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste2g02998 WRKY 3e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02998 2 30011778 30014086 Pste2g02998 2 30011778 30014086 ECH
Pste2g02998 2 30011778 30014086 Pste6g03970 6 28948656 28950358 PCT