Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02984 AAACTTGAGTTGCAGGAGCGGCGCCCTGAGATGGAGAGCAAGCCTGAAAATTTAATGTTTAAGATCAAATACAGTAGAAGACCACTAAAGGAATCAAAGTTTAAAAAAGGGGGAATAGTGGAAGTCAGCAAGGATGACGAAGGATATAAGGGTGCTTGGTTTCCTGCTACCGTTGTTGACATAATAGGAAAAACCAGGTTTCTACTAGAATATACGGACGTGAAAACCAATGATGGCACCCAACTCTTGAAAGAAGAAGTTGAAGCAAGGTTTGTTAGGCCCTGCCCTCCTGAAGTTCCATTTGCTGGTTCTTTCAAACAGTTCCAGGAAGTTGATGCATGGTATAATGATGGGTGGTGGGAAGCCGTGGTTCTTGAAGTACTAAATAACATAGAATGTATGGTTTCTTTCATTCACAAAGGTGTATTCAAATTTGAGATTTCTAAACTAAGGCCTCGTCAAGACTGGTTGGATGGAAATTGGGTGACGTCTTCCATGAAATCAAGGGAGCTGATAAAGAAGTTTGGAGATCTGATGCCTAAAACCAAGAATCATACTGGAATTAAATTAGTCTTGAAACGTCAAAAGCCTAATGAGAGTTCAAAGAAGTATAGAGATGTAATGGCAAGGACCACAAACACCCAAAGCAAATTGGTGGCACATTTATGTAATGGTGCAAAGGTAGAAGTCAGAAGTGATGAAGAAGGCTATCAAGGTGCCTGGTATACTGCCATTGTTGTTGAGTCTTTGCTGAATGGCAAGTACTTGGTGGAGTATTTAACCTTGAAAACTGATGACTTCACTGAACAACTGAGAGAAGTAGCAGATGCTTCAAATATTCGGCCATATCCACTAGACATCGATCATGTTCACTGCTTTGCACTGCGCGAAATGGTTGATGCTTGGTATAATGAAGGATGGTGGGTAGGTCAGGTATCTAGTGTTCTTCATGGTTTCAAGTATAAGGTTTACTTTTGGCCTACAAAGGGGGAGCTGGAATTTGAGCATTGCCATCTGAGGCCTCATCAACAATGGATTGATGGAAAATGGGTGCTTGCTTCTTCGCAATCATCCCACACTCACGATCAAGCTGATCAAGTTGTTGCTCAAGTTATTCCGTGCACTCCAAGCTAA 1134 0.4162 KLELQERRPEMESKPENLMFKIKYSRRPLKESKFKKGGIVEVSKDDEGYKGAWFPATVVDIIGKTRFLLEYTDVKTNDGTQLLKEEVEARFVRPCPPEVPFAGSFKQFQEVDAWYNDGWWEAVVLEVLNNIECMVSFIHKGVFKFEISKLRPRQDWLDGNWVTSSMKSRELIKKFGDLMPKTKNHTGIKLVLKRQKPNESSKKYRDVMARTTNTQSKLVAHLCNGAKVEVRSDEEGYQGAWYTAIVVESLLNGKYLVEYLTLKTDDFTEQLREVADASNIRPYPLDIDHVHCFALREMVDAWYNEGWWVGQVSSVLHGFKYKVYFWPTKGELEFEHCHLRPHQQWIDGKWVLASSQSSHTHDQADQVVAQVIPCTPS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02984 377 CDD Tudor_Agenet_AtDUF_rpt1_3 34 97 - -
Pste2g02984 377 CDD Tudor_Agenet_AtDUF_rpt2_4 295 341 - -
Pste2g02984 377 SMART agenet_At_2 32 100 IPR014002 -
Pste2g02984 377 SMART agenet_At_2 291 347 IPR014002 -
Pste2g02984 377 SMART agenet_At_2 103 158 IPR014002 -
Pste2g02984 377 SMART agenet_At_2 220 288 IPR014002 -
Pste2g02984 377 CDD Tudor_Agenet_AtDUF_rpt1_3 225 284 - -
Pste2g02984 377 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 30 202 - -
Pste2g02984 377 Pfam Agenet domain 40 97 IPR008395 -
Pste2g02984 377 Pfam Agenet domain 225 284 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02984 Pste-Chr2 29869903 29871677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02984 231 345 PHD Transcription Factor Family AT5G58610 27.941 5.72e-07 49.7