Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02980 CCTCTTTCTATCTCTCTCTCGCTCTCCCTCAATCTCTTTACCTCTTCAACTAATTGCTTTGAGTTGGAATCAATCAATCAGAGTTATATCCAAATTGGGTGACTCATGGAAGTGAAAGGCATAGTAAGCAACTCCACCACCACAATCCAAAGTGAGGATGAGATGGACCTTAGAAGAGGCCCTTGGACCGTCGATGAGGACCTTGCCCTCATCAATTACATTGCCAATCACGGTGAAGGTCGATGGAACTCCCTTGCCCGTTCAGCTGGACTCAAACGAACTGGCAAGAGTTGCAGATTGAGATGGTTGAATTATTTGCGTCCTGATGTTCGACGTGGCAACATCACACTTGAAGAACAGCTTCTTATTCTCGAGCTCCACGGTCGCTGGGGAAACCGATGGTCTAAAATTGCTCAATATTTACCGGGAAGAACGGACAATGAGATTAAAAACTATTGGAGGACCCGTGTCCAAAAGCATGCTAAACAACTGAAATGTGACGTGAATAGCAAGCAATTCAAGGATGCCATGCGCTACCTTTGGATGCCAAGGCTGGTAGAGCGCATTCAAGCCGCGGCAGCCGTCACCACCACTGCCGCCACCGCCGGTTCTCCAACAGCATCTGCCAGTGCTACTACCACCATCACCAACAGCGCAACCACATACAACTACGACAACAATAACAACCTTAACAACAATTTTGAGGTGCGTAATGGGAACATGATGTTGAGTCCAGCGTTTATGAACAACAACTTTAGCGGTTCACAGAGTTACACTCCGGAGAATAGTAGCACAGGTGCATCATCGGACTCGTTTGGGGCTCAGGTTTCACCTGTCTCGGACTTGACTCAGGATTATTACAATAATGTCACTGTTGGTAATAATAACAATAGTAACCCTAATCCTGATTACTACCAACAAGCACAGGATCAACTGAACTTTTTCGAATGCATCACCAGCCCATCAGGGTTTTTTCCTCAGGAGATGGATTTCCAATCCTTGGAACCAAACACCCCGTGGATTCAGGGTAATGGTGACGCATCCAATGGTTTCTGGAATGTCGAAAACATGTTGCTCTTTCAACAACTCAGTGACAGCATGTAGTGAAACCTTAACTCCCAAGAGAATTCATGGTGGGGGGATTTTACACAAGGACAATTGTGAAATTTACAGATAAAAATATTACATATAAGTAGAACAACGAGCAAATAGAATAAATTCATATGTAGGACACACGTAGGATCCACGTGGACATACTAAGGATATTATAAGGCAAAGAGAAGGAAAATGTGAATTACTTTTAAGTTTAATTTGTACGGACTTTTTTTTGTGCTTTAATTTTCCTTATTTTAGAGGGGTGGGAAATATTTGTAATTTGAG 1380 0.4341 MEVKGIVSNSTTTIQSEDEMDLRRGPWTVDEDLALINYIANHGEGRWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHGRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSKQFKDAMRYLWMPRLVERIQAAAAVTTTAATAGSPTASASATTTITNSATTYNYDNNNNLNNNFEVRNGNMMLSPAFMNNNFSGSQSYTPENSSTGASSDSFGAQVSPVSDLTQDYYNNVTVGNNNNSNPNPDYYQQAQDQLNFFECITSPSGFFPQEMDFQSLEPNTPWIQGNGDASNGFWNVENMLLFQQLSDSM 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02980 332 SUPERFAMILY Homeodomain-like 21 118 IPR009057 -
Pste2g02980 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 126 IPR017930 -
Pste2g02980 332 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Pste2g02980 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 75 IPR017930 -
Pste2g02980 332 FunFam Myb transcription factor 24 76 - -
Pste2g02980 332 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Pste2g02980 332 Pfam Myb-like DNA-binding domain 77 120 IPR001005 -
Pste2g02980 332 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Pste2g02980 332 Gene3D - 81 144 - -
Pste2g02980 332 SMART sant 23 73 IPR001005 -
Pste2g02980 332 SMART sant 76 124 IPR001005 -
Pste2g02980 332 CDD SANT 26 71 IPR001005 -
Pste2g02980 332 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 19 203 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pste2g02980 332 CDD SANT 92 120 IPR001005 -
Pste2g02980 332 FunFam MYB transcription factor 81 144 - -
Pste2g02980 332 MobiDBLite consensus disorder prediction 219 240 - -
Pste2g02980 332 Gene3D - 21 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02980 Pste-Chr2 29764771 29766940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02980 17 319 MYB Transcription Factor Family AT3G06490 52.941 4.33e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste2g02980 Myb_DNA-binding 4.6e-15 CL0123