Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste2g02957 | TATCTCTCCATACTCTACTAGGTTCTGGTGTTTCTTTTTTGTTACGCACACCAAAACGGCTCTCTCGCAGGCCAAAAGCTTCACCGTTTCATTTCGCTATTAGGGTTTCGTGTTCGCCTCGTCAAATGTCGCACGAAGCCGCTACTTCACTATTCGCTGTCTCAATTCAATTCTTCGCCGTGCTCTTCACCAACCATGCATTGATTATTCTCCCCTTCTTCTCTTCAGTCCAGATTGCTTGTTCTTTTGGTATTTCTTGCGGTCTTGTTGCGGACCGCTTAATTATGCTGATAGCAGCTGAATATCTGTTTCTGTTTAGGTTCACGGCTGGTGAATTACCGATCATATACGAATTCGTTATGGCAACAGCGGAGGCAGCTTCTGCGGGTCTTGGTCCCAGATATGCACCTGATGATCCTACCCTTCCCCAACCATGGAAGGGGTTGATTGACGGAAGCACTGGTTTGTTATACTATTGGAATCCTGAAACCAATGTTACACAGTATGAAAAACCGGCACCCTTGATCCCACCTGTGCCTTCAGGCCCCGCGCATGTGCCTTCTACACCGACACTGGCACCTATACCAGTGGCTAATACAATGCAGTCTGGTGGGATGTTGCCACAGCACGGGCAGCAGATGCTGCAAATGCAACCCTCACAACCTCCGATGAGTCATATTACCCAACAGCATGGCCAATCTATGCCGCAACAACAGCAGCAGAGTTCCCATATGACGCAGGTCACTCAGCAGCCGTCTTCTCAGGGTGCTCAGCCTGCACAGCAGCAGAACCAACAAGGGCAGCAAATGATGCAGCAGCCTCAAGGACATCAAGTCAGGCAGCAAGTGATGCAGCCTCAAGGGCAGCAAATGCATCATCAGATGCCGCCACAGGTGATCCATTCCCAGCATTTTGGGCAAGGAACACCTCAGGATCATGGCTCGCATATTGCACAACCGCAAGCACATCAATTCACTCCCCCAAACATGCACTATATGTCATATCAGCAGAATATTACATCCAGGCAACCAAACTCTCAGAACATTCAGCCAAACATGGTGTCACCTGGGCAACCTAACTCCCAGCAGATTCAGCATAACATGCATGGTCAGCCCTTTGAAAATCAACAGACAGCATTTCCAAAAGTAGAGGAAGCGGAGTTTAAAAATGGAAGCCAGGTTGGACTGTCGCCATCACAGTATCCACAAAGGACTGCATTGCCGGTTCAGAATAATCAGAACATTCCCGCTGAAGTTGGTTCTGGTCAAGTACCTAATGTAGGTGTCAATGCTGGCCAACCACCGCAATTCAGGGCAGCCTTGTCAGGCAATATGCAACAGTCATCCTCTGCAATGCCATTGCAGCAGGGTGGATCAGATTTATATTATCAACATGGTCCTAACTTTCATAACCAGATGAGCCCAAGAATGATGCAGGGTCATCCATCCAATGTCCATCCCCCTGGCCAAAAGATGAGTCATGAGGATAATTTACGTGGCAGAGCAGGGAATGAATATTACTATAATTCTAACAAAGACATGTCATCAATGGGTCGTCAGCAACCGGATATGGCACAAATACCAATCCCAAGAAATCAGCAGGATGTGAGGGTTGGCAACACTCCTTATCAAAATGTCATGCCAAGTGGAAATGGAAGTGGTGTTGCTGGGAATGTTACAACTAGCATGTTTGGTCCTCCAATGGGAGGGCCTCCACCTCTCTCTACAAACTCCTTAATGAGGCCTCCTTATATTGGATCTTCAGAAGCTATTGATCTCTCACCAGCTGAAATTTACTGTCAGCAACATGAAGTTACAGCGATGGGTGACAACATTCCACCTCCTTTCATGACATTTGATGCTACTGGGTTCCCTCCAGAGATATTGAGAGAGGTAAGGTGCGATATCTGCTCCAGTGCAGGAGCATATGTCGTACGCTGCACTGCTAATCTGCTATTGGCACAATTACACATTTGTGCACCATTCATAGATCTGATTGATTGCTATATACTCTCATTTCAGATATATTCTGCTGGCTTCTCAAATCCAACACCAATACAGGCTCAAACATGGCCTGTTGCACTACAAGGTAGAGACATAGTAGCAATTGCCAAAACAGGCTCTGGGAAAACATTAGGCTACTTAATGCCTGCCTTTGTTCTTCTTAGACAGCGACGTAATAATTCTCTGAATGGTCCCACTGTCTTGGTTTTGGCTCCAACACGTGAACTTGCAACACAGATCCAAGATGAGGTCAACAAATTTGGTCGATCATCACGAGTTTCTTGCACGTGCTTGTATGGTGGAGCACCTAAAGCCCTTCAACTGAAAGAGTTGGATCGAGGAGCAGACATTGTTGTTGCCACACCTGGTCGGCTCAATGATATACTTGAAATGAAGAAAATTGACTTTGGGCAAGTTTCACTCCTTGTGCTTGATGAGGCTGACCGAATGCTTGACATGGGTTTTGAGCCTCAAATTCGTAAGATTGTGAATGAGATTCCACCACGGAGACAAACTCTCATGTACACTGCAACCTGGCCAAAAGAAGTAAGAAAAATTGCTAGTGATCTTCTTGTTAATCCTGTCCAGGTTAACATTGGAAGTGTAGATGAGCTTGCTGCAAATAAAGCTATCACACAGTATGTCGAAGTTGTCCCACAAATGGAGAAACAGAGGCGTTTGGAGCAGATCCTCAGATCCCAAGAACGAGGATCTAAGGTCATAATATTTTGTTCCACAAAGAGGTTATGTGATCAGCTTGCCCGTAGTATTGGCCGCACTTTTGGGGCTGCTGCAATTCATGGAGACAAGTCTCAAGGTGAGAGAGACTGGGTTTTAAGTCAGTTCCGGACTGGGAAGTCACCAATTCTGGTTGCCACTGATGTTGCTGCGCGTGGGCTTGATATTAAGGATATAAGGGTGGTGATTAATTATGATTTTCCCACTGGAATTGAGGATTATGTGCATCGAATAGGAAGAACTGGTAGGGCAGGTGCTACTGGAGTGTCATATACCTTTTTCTCTGAGCAGGACTGGAAACATGCGGGTGATTTAATTAAAGTTTTGGAGGGTGCTAATCAGCACGTGCTTCCAGAGTTAAGACAGATGGCTTTGCGTGGGCCACCAAACTTTGGAAAGGAACGGGGTGGGATGAGTCGGTTTGATTCTGGTGGTGGGCGTTGGGATACTGGTGGTCGTGGTGGCATGAGGGATGGTGGCTTTGGGGACGTGGAGGTGGCATGAGGGATGGTGGCTTTGGGGGACGCGGGCGGTGGCATGAGGGATGGTGGCTT | 3295 | 0.4701 | MSHEAATSLFAVSIQFFAVLFTNHALIILPFFSSVQIACSFGISCGLVADRLIMLIAAEYLFLFRFTAGELPIIYEFVMATAEAASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPLIPPVPSGPAHVPSTPTLAPIPVANTMQSGGMLPQHGQQMLQMQPSQPPMSHITQQHGQSMPQQQQQSSHMTQVTQQPSSQGAQPAQQQNQQGQQMMQQPQGHQVRQQVMQPQGQQMHHQMPPQVIHSQHFGQGTPQDHGSHIAQPQAHQFTPPNMHYMSYQQNITSRQPNSQNIQPNMVSPGQPNSQQIQHNMHGQPFENQQTAFPKVEEAEFKNGSQVGLSPSQYPQRTALPVQNNQNIPAEVGSGQVPNVGVNAGQPPQFRAALSGNMQQSSSAMPLQQGGSDLYYQHGPNFHNQMSPRMMQGHPSNVHPPGQKMSHEDNLRGRAGNEYYYNSNKDMSSMGRQQPDMAQIPIPRNQQDVRVGNTPYQNVMPSGNGSGVAGNVTTSMFGPPMGGPPPLSTNSLMRPPYIGSSEAIDLSPAEIYCQQHEVTAMGDNIPPPFMTFDATGFPPEILREVRCDICSSAGAYVVRCTANLLLAQLHICAPFIDLIDCYILSFQIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYLMPAFVLLRQRRNNSLNGPTVLVLAPTRELATQIQDEVNKFGRSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSIGRTFGAAAIHGDKSQGERDWVLSQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQMALRGPPNFGKERGGMSRFDSGGGRWDTGGRGGMRDGGFGDVEVA | 1039 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste2g02957 | 1039 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 689 | 972 | IPR027417 | - | |
Pste2g02957 | 1039 | CDD | SF2_C_DEAD | 837 | 966 | - | - | |
Pste2g02957 | 1039 | Gene3D | - | 552 | 827 | IPR027417 | - | |
Pste2g02957 | 1039 | MobiDBLite | consensus disorder prediction | 998 | 1039 | - | - | |
Pste2g02957 | 1039 | Pfam | Helicase conserved C-terminal domain | 849 | 957 | IPR001650 | - | |
Pste2g02957 | 1039 | Gene3D | - | 828 | 998 | IPR027417 | - | |
Pste2g02957 | 1039 | ProSiteProfiles | WW/rsp5/WWP domain profile. | 98 | 132 | IPR001202 | GO:0005515 | |
Pste2g02957 | 1039 | SUPERFAMILY | WW domain | 93 | 130 | IPR036020 | GO:0005515 | |
Pste2g02957 | 1039 | Pfam | DEAD/DEAH box helicase | 642 | 812 | IPR011545 | GO:0003676|GO:0005524 | |
Pste2g02957 | 1039 | CDD | WW | 101 | 132 | IPR001202 | GO:0005515 | |
Pste2g02957 | 1039 | Pfam | WW domain | 100 | 130 | IPR001202 | GO:0005515 | |
Pste2g02957 | 1039 | SMART | ultradead3 | 637 | 840 | IPR014001 | - | |
Pste2g02957 | 1039 | ProSitePatterns | WW/rsp5/WWP domain signature. | 104 | 130 | IPR001202 | GO:0005515 | |
Pste2g02957 | 1039 | MobiDBLite | consensus disorder prediction | 158 | 284 | - | - | |
Pste2g02957 | 1039 | FunFam | ATP-dependent RNA helicase RhlB | 827 | 999 | - | - | |
Pste2g02957 | 1039 | Gene3D | - | 95 | 134 | - | - | |
Pste2g02957 | 1039 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 567 | 996 | - | - | |
Pste2g02957 | 1039 | SMART | helicmild6 | 873 | 957 | IPR001650 | - | |
Pste2g02957 | 1039 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 769 | 777 | IPR000629 | - | |
Pste2g02957 | 1039 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 649 | 823 | IPR014001 | - | |
Pste2g02957 | 1039 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 852 | 996 | IPR001650 | - | |
Pste2g02957 | 1039 | SMART | ww_5 | 99 | 132 | IPR001202 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste2g02957 | Pste-Chr2 | 29534262 | 29542244 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste2g02957 | 633 | 995 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 34.341 | 3.22e-63 | 218 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste2g02957 | 2 | 29534262 | 29542244 | Pste2g02957 | 2 | 29534262 | 29542244 | ECH |