Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02957 TATCTCTCCATACTCTACTAGGTTCTGGTGTTTCTTTTTTGTTACGCACACCAAAACGGCTCTCTCGCAGGCCAAAAGCTTCACCGTTTCATTTCGCTATTAGGGTTTCGTGTTCGCCTCGTCAAATGTCGCACGAAGCCGCTACTTCACTATTCGCTGTCTCAATTCAATTCTTCGCCGTGCTCTTCACCAACCATGCATTGATTATTCTCCCCTTCTTCTCTTCAGTCCAGATTGCTTGTTCTTTTGGTATTTCTTGCGGTCTTGTTGCGGACCGCTTAATTATGCTGATAGCAGCTGAATATCTGTTTCTGTTTAGGTTCACGGCTGGTGAATTACCGATCATATACGAATTCGTTATGGCAACAGCGGAGGCAGCTTCTGCGGGTCTTGGTCCCAGATATGCACCTGATGATCCTACCCTTCCCCAACCATGGAAGGGGTTGATTGACGGAAGCACTGGTTTGTTATACTATTGGAATCCTGAAACCAATGTTACACAGTATGAAAAACCGGCACCCTTGATCCCACCTGTGCCTTCAGGCCCCGCGCATGTGCCTTCTACACCGACACTGGCACCTATACCAGTGGCTAATACAATGCAGTCTGGTGGGATGTTGCCACAGCACGGGCAGCAGATGCTGCAAATGCAACCCTCACAACCTCCGATGAGTCATATTACCCAACAGCATGGCCAATCTATGCCGCAACAACAGCAGCAGAGTTCCCATATGACGCAGGTCACTCAGCAGCCGTCTTCTCAGGGTGCTCAGCCTGCACAGCAGCAGAACCAACAAGGGCAGCAAATGATGCAGCAGCCTCAAGGACATCAAGTCAGGCAGCAAGTGATGCAGCCTCAAGGGCAGCAAATGCATCATCAGATGCCGCCACAGGTGATCCATTCCCAGCATTTTGGGCAAGGAACACCTCAGGATCATGGCTCGCATATTGCACAACCGCAAGCACATCAATTCACTCCCCCAAACATGCACTATATGTCATATCAGCAGAATATTACATCCAGGCAACCAAACTCTCAGAACATTCAGCCAAACATGGTGTCACCTGGGCAACCTAACTCCCAGCAGATTCAGCATAACATGCATGGTCAGCCCTTTGAAAATCAACAGACAGCATTTCCAAAAGTAGAGGAAGCGGAGTTTAAAAATGGAAGCCAGGTTGGACTGTCGCCATCACAGTATCCACAAAGGACTGCATTGCCGGTTCAGAATAATCAGAACATTCCCGCTGAAGTTGGTTCTGGTCAAGTACCTAATGTAGGTGTCAATGCTGGCCAACCACCGCAATTCAGGGCAGCCTTGTCAGGCAATATGCAACAGTCATCCTCTGCAATGCCATTGCAGCAGGGTGGATCAGATTTATATTATCAACATGGTCCTAACTTTCATAACCAGATGAGCCCAAGAATGATGCAGGGTCATCCATCCAATGTCCATCCCCCTGGCCAAAAGATGAGTCATGAGGATAATTTACGTGGCAGAGCAGGGAATGAATATTACTATAATTCTAACAAAGACATGTCATCAATGGGTCGTCAGCAACCGGATATGGCACAAATACCAATCCCAAGAAATCAGCAGGATGTGAGGGTTGGCAACACTCCTTATCAAAATGTCATGCCAAGTGGAAATGGAAGTGGTGTTGCTGGGAATGTTACAACTAGCATGTTTGGTCCTCCAATGGGAGGGCCTCCACCTCTCTCTACAAACTCCTTAATGAGGCCTCCTTATATTGGATCTTCAGAAGCTATTGATCTCTCACCAGCTGAAATTTACTGTCAGCAACATGAAGTTACAGCGATGGGTGACAACATTCCACCTCCTTTCATGACATTTGATGCTACTGGGTTCCCTCCAGAGATATTGAGAGAGGTAAGGTGCGATATCTGCTCCAGTGCAGGAGCATATGTCGTACGCTGCACTGCTAATCTGCTATTGGCACAATTACACATTTGTGCACCATTCATAGATCTGATTGATTGCTATATACTCTCATTTCAGATATATTCTGCTGGCTTCTCAAATCCAACACCAATACAGGCTCAAACATGGCCTGTTGCACTACAAGGTAGAGACATAGTAGCAATTGCCAAAACAGGCTCTGGGAAAACATTAGGCTACTTAATGCCTGCCTTTGTTCTTCTTAGACAGCGACGTAATAATTCTCTGAATGGTCCCACTGTCTTGGTTTTGGCTCCAACACGTGAACTTGCAACACAGATCCAAGATGAGGTCAACAAATTTGGTCGATCATCACGAGTTTCTTGCACGTGCTTGTATGGTGGAGCACCTAAAGCCCTTCAACTGAAAGAGTTGGATCGAGGAGCAGACATTGTTGTTGCCACACCTGGTCGGCTCAATGATATACTTGAAATGAAGAAAATTGACTTTGGGCAAGTTTCACTCCTTGTGCTTGATGAGGCTGACCGAATGCTTGACATGGGTTTTGAGCCTCAAATTCGTAAGATTGTGAATGAGATTCCACCACGGAGACAAACTCTCATGTACACTGCAACCTGGCCAAAAGAAGTAAGAAAAATTGCTAGTGATCTTCTTGTTAATCCTGTCCAGGTTAACATTGGAAGTGTAGATGAGCTTGCTGCAAATAAAGCTATCACACAGTATGTCGAAGTTGTCCCACAAATGGAGAAACAGAGGCGTTTGGAGCAGATCCTCAGATCCCAAGAACGAGGATCTAAGGTCATAATATTTTGTTCCACAAAGAGGTTATGTGATCAGCTTGCCCGTAGTATTGGCCGCACTTTTGGGGCTGCTGCAATTCATGGAGACAAGTCTCAAGGTGAGAGAGACTGGGTTTTAAGTCAGTTCCGGACTGGGAAGTCACCAATTCTGGTTGCCACTGATGTTGCTGCGCGTGGGCTTGATATTAAGGATATAAGGGTGGTGATTAATTATGATTTTCCCACTGGAATTGAGGATTATGTGCATCGAATAGGAAGAACTGGTAGGGCAGGTGCTACTGGAGTGTCATATACCTTTTTCTCTGAGCAGGACTGGAAACATGCGGGTGATTTAATTAAAGTTTTGGAGGGTGCTAATCAGCACGTGCTTCCAGAGTTAAGACAGATGGCTTTGCGTGGGCCACCAAACTTTGGAAAGGAACGGGGTGGGATGAGTCGGTTTGATTCTGGTGGTGGGCGTTGGGATACTGGTGGTCGTGGTGGCATGAGGGATGGTGGCTTTGGGGACGTGGAGGTGGCATGAGGGATGGTGGCTTTGGGGGACGCGGGCGGTGGCATGAGGGATGGTGGCTT 3295 0.4701 MSHEAATSLFAVSIQFFAVLFTNHALIILPFFSSVQIACSFGISCGLVADRLIMLIAAEYLFLFRFTAGELPIIYEFVMATAEAASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPLIPPVPSGPAHVPSTPTLAPIPVANTMQSGGMLPQHGQQMLQMQPSQPPMSHITQQHGQSMPQQQQQSSHMTQVTQQPSSQGAQPAQQQNQQGQQMMQQPQGHQVRQQVMQPQGQQMHHQMPPQVIHSQHFGQGTPQDHGSHIAQPQAHQFTPPNMHYMSYQQNITSRQPNSQNIQPNMVSPGQPNSQQIQHNMHGQPFENQQTAFPKVEEAEFKNGSQVGLSPSQYPQRTALPVQNNQNIPAEVGSGQVPNVGVNAGQPPQFRAALSGNMQQSSSAMPLQQGGSDLYYQHGPNFHNQMSPRMMQGHPSNVHPPGQKMSHEDNLRGRAGNEYYYNSNKDMSSMGRQQPDMAQIPIPRNQQDVRVGNTPYQNVMPSGNGSGVAGNVTTSMFGPPMGGPPPLSTNSLMRPPYIGSSEAIDLSPAEIYCQQHEVTAMGDNIPPPFMTFDATGFPPEILREVRCDICSSAGAYVVRCTANLLLAQLHICAPFIDLIDCYILSFQIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYLMPAFVLLRQRRNNSLNGPTVLVLAPTRELATQIQDEVNKFGRSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKAITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSIGRTFGAAAIHGDKSQGERDWVLSQFRTGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQMALRGPPNFGKERGGMSRFDSGGGRWDTGGRGGMRDGGFGDVEVA 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02957 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 689 972 IPR027417 -
Pste2g02957 1039 CDD SF2_C_DEAD 837 966 - -
Pste2g02957 1039 Gene3D - 552 827 IPR027417 -
Pste2g02957 1039 MobiDBLite consensus disorder prediction 998 1039 - -
Pste2g02957 1039 Pfam Helicase conserved C-terminal domain 849 957 IPR001650 -
Pste2g02957 1039 Gene3D - 828 998 IPR027417 -
Pste2g02957 1039 ProSiteProfiles WW/rsp5/WWP domain profile. 98 132 IPR001202 GO:0005515
Pste2g02957 1039 SUPERFAMILY WW domain 93 130 IPR036020 GO:0005515
Pste2g02957 1039 Pfam DEAD/DEAH box helicase 642 812 IPR011545 GO:0003676|GO:0005524
Pste2g02957 1039 CDD WW 101 132 IPR001202 GO:0005515
Pste2g02957 1039 Pfam WW domain 100 130 IPR001202 GO:0005515
Pste2g02957 1039 SMART ultradead3 637 840 IPR014001 -
Pste2g02957 1039 ProSitePatterns WW/rsp5/WWP domain signature. 104 130 IPR001202 GO:0005515
Pste2g02957 1039 MobiDBLite consensus disorder prediction 158 284 - -
Pste2g02957 1039 FunFam ATP-dependent RNA helicase RhlB 827 999 - -
Pste2g02957 1039 Gene3D - 95 134 - -
Pste2g02957 1039 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 567 996 - -
Pste2g02957 1039 SMART helicmild6 873 957 IPR001650 -
Pste2g02957 1039 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 769 777 IPR000629 -
Pste2g02957 1039 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 649 823 IPR014001 -
Pste2g02957 1039 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 852 996 IPR001650 -
Pste2g02957 1039 SMART ww_5 99 132 IPR001202 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02957 Pste-Chr2 29534262 29542244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02957 633 995 Eukaryotic Initiation Factors Gene Family AT3G19760 34.341 3.22e-63 218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02957 2 29534262 29542244 Pste2g02957 2 29534262 29542244 ECH