Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02943 ATGTGCAGCAGCATCTTTGGGCCAATAATCATGGACAATTACCAGGGTGATTTAACTGACATAGTCCGAGCCAGTGGTGGAGCATATGGTAGCAGCACAGGCACCTCTTCTTCATCATCTCAATTACCTATCACATCTCATCACACTACCCTCTCTCATAATTATCACTGGCACCAACACTTCTCTTCTTCTGATCCCATCACTTTCTCTTCTGTGCTTCAAGACTCCAGCGGAGGAGCTACTAACTTTGGTGATCCTTTCTCAACCATGAGAGATCCCTTCCTTCAGGACCTTGACTTACCTTCAGCTTCTGCCTACTTCACTGGGGGCTTGGAAGAAGCAGCTGCAACTTTTGGTGTTGCTTCTGCTGCTGCTGCTGCTAATGCTAATACTAGTACTACTGTTTTTGCTCCACACAAGATTCTTGAGGAACATGACATGAGAAGACCTTGTAAAAACATATTCTCAAACATGATTCAGATCTCTCCCAATGCAAAGTTACCAGTCTCACCCTATGATTCAACCGCTTCCATGGCACCTTCTCCAAGGCCAATTAAACCTCCTGCTGTGGTTTCACCCCGCATGGTTAATGCAAGCACCTCCAAGGAGTGCTTCGTGGACACAGCAGGAGTGCAGATCTCGTCTCCACGGAATCCGGGTCTTAAACGAAGAAAGAACCAGGCCAAAAAGGTGGTTTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGAGAGGTAGTTCCGTCTGATTTGTGGGCTTGGAGGAAATACGGTCAGAAACCAATTAAAGGGTCACCTTATCCCAGGGGTTATTACAGATGCAGCAGCTCAAAGGGTTGCTCAGCGAGGAAGCAAGTTGAGAGGAGCAGAACAGACCCAAACATGTTGGTTATCACATACACATCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTGGCTGGTTCAACAAGATCACAGCCATCCAAGAACAGTGCTGCTAATTCAAAGAATTCAGAAGGCTCAAACCCCCAAAAGAGCACAGCAACAAAAGCAAAGGATGAGCAGCAGCAGGAGAGTAACAATAGTGAGGGCAATGTATCTCCAGTTGTGGCTGGGAACTCAGGAAACAGTATTAAGGAAGAGAATACGGAAGACATAGAAAAGCAGCTGGAGATGGATGAGGGAGAGTTCAGTGATGGACTCCCTTACAAGCCTTGTTTGATGGATCAGAGTAATAACCAATCTGAAGACTTCTTTGCTGAGTTGGGAGAAATAGAAGCTGACCCACTGGACCTTTTGTTTGCTCAAGGTTTTGGTGCAGCTGATGAACAAAGAGAATCCAAGGCCTTAGATCCATTCCGTCTGTTTGACTGGTCAGGAGACAACAGCAATAACACCAACACCAGTTCATTTGAAGAACCTAATATTAAGAGAAGGTTATAACAAGACCTAGAAAAAAGGCATGCACACCTCCCTCACAAAACCCCTTAATATCATCCTTTAAGTTTTATTTGGTGGTGCAAATATCATTGAAGGTCATGTTATGCTCTTTTTCTTATTTGGTTTGAAATTAATATGTCATGTGGGGGAGGAGGGTGTGAGAGATTTCCACTTTTTCTGCTTACTACCTTTTCTTTTTCTTGTTATTTACCAGAACAGTCAGGGAGATAAATTAGTAGAGTGAAAAAAAGAGAGTGCTGGTCGATTGGAAGCAAACCCAAAGAGTCCCACATTCCTTTTGGAATATTGGTGGATGGGACAGAAAGCTGAGGAACAGAAGGTTGCAACAGTTAAAACAAGTACATTCACTATAGACATGACTCGAAAGCTCAGTGAGTAGATTGGTGATGATAATGGGATGGGACTAGCCCTTTCATCTTTTCAAGTGGGAAAAATTATTTAAAAGCCAC 1904 0.4407 MCSSIFGPIIMDNYQGDLTDIVRASGGAYGSSTGTSSSSSQLPITSHHTTLSHNYHWHQHFSSSDPITFSSVLQDSSGGATNFGDPFSTMRDPFLQDLDLPSASAYFTGGLEEAAATFGVASAAAAANANTSTTVFAPHKILEEHDMRRPCKNIFSNMIQISPNAKLPVSPYDSTASMAPSPRPIKPPAVVSPRMVNASTSKECFVDTAGVQISSPRNPGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNSAANSKNSEGSNPQKSTATKAKDEQQQESNNSEGNVSPVVAGNSGNSIKEENTEDIEKQLEMDEGEFSDGLPYKPCLMDQSNNQSEDFFAELGEIEADPLDLLFAQGFGAADEQRESKALDPFRLFDWSGDNSNNTNTSSFEEPNIKRRL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02943 478 MobiDBLite consensus disorder prediction 275 379 - -
Pste2g02943 478 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 16 431 IPR044810 GO:0003700
Pste2g02943 478 Pfam WRKY DNA -binding domain 252 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g02943 478 SUPERFAMILY WRKY DNA-binding domain 248 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste2g02943 478 MobiDBLite consensus disorder prediction 294 377 - -
Pste2g02943 478 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g02943 478 MobiDBLite consensus disorder prediction 456 471 - -
Pste2g02943 478 MobiDBLite consensus disorder prediction 455 478 - -
Pste2g02943 478 SMART WRKY_cls 250 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste2g02943 478 FunFam probable WRKY transcription factor 14 224 304 - -
Pste2g02943 478 Gene3D WRKY domain 224 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02943 Pste-Chr2 29420453 29423679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02943 1 445 WRKY Transcription Factor Family AT2G34830 41.394 1.89e-94 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste2g02943 WRKY 2.7e-25 CL0274