Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02916 TCGATTGGTTCTGAAATCGAACCAGAGTGTGTGATAGGAATAGGGTTTGTCGCGTTCTCTTCACTGGGTTTGAATTTGTATGATGGAATGCTCTGCTTCCTGTGTACCTTGTTATTGCCGGCGATGACCGGAGACCGATGTCACCCGTGGGAGGGCATGGCTGATGAAGAGGATGCCGCCGCCGTGGGGAGGCCTTGCCAGTCTGATTTTCCGGCGGAAAGTACTTGTAACTCTGCTGCGCGTGAGATTGGTTATTTGTCTCAAGCTAGAAAGGCACTCTCTGAGCGTTCTCCTTTTGATGTTGCTGAAGAAACGTCCACTTCTGCCACGCTTACTCTGCCCAGTGAATTGGCTAGTTTGTTGAACCGTCATACTGACAACAGGAGGCGTCCCAAGAAGTCTCAGTCTGGTGGGCACAAGAGGAAATCTTCGACCAGGGCAAACCAGAAGAAGCCGGAGGATTCTAACATTTGGATTGAGACTGAGGAGTACTTTAGGGACTTGACTGTGGCCGATATTGACATCTTGTTTGAGGCCTCTTGCACTTCTAGTTTAGTGTCTCGGGACTGTTTCTCCATTCCATTTTTGGGAAATGCTCCGAGGAACAATGCAGTTGGTATTAATAGTGAGGCTGAATTGGAGCCTGTTTCAAAATTGAATATAGTTAGTAGTGTGGATGACAAGGGTGACTTACTTAGTAGTGAGGATGGGAAGAAGGGTTGTGGAACAGAAAATGAGGATGTGTCATTGGTAATTGAGGCAATTGACAATGTTGCTGTTGAACAAATTCATCATCAAAAAGACAAGAATCAGGACATTTCTGATTCTTCTATTAGTTTAGAGTGGTTTTTAGGTTGTAGGAATAAGGTTTCTTTGACTTCTGAGCGCCCTGCCAAGAAAAGGAGGCTTTTGGGTGGTGAAGCTGATTTGGAGAAAGTTATAATGACTTGTCCCTGTGATGAAGGCCAACCGTTTTGTCATTATTGTGGCAGGGGAGACGCTGGAAGAGATTCCAATAGGTTAATTGTCTGTGCTTCTTGTAAAATGGCAGTTCACCTTAAGTGCTATGGTGTGAAAGATGATGTAGATGGGGCTTGGCTGTGCTCCTGGTGCAAGCAAAAGGGTTGTGCTGATGAATCCGTGAATCCTTGTGTTCTTTGCCCAAAGAAGGGTGGTGCGCTAAAACCAGTTAATAGCAGCATAGAAGGTGCTGGATCTGTCCCGTTTGTGCACTTGTTTTGCTCTTTGTGGATGTCTGAGGTTTATGTAGATGATTTGAACAAGATGGAACCTGTCATGAATGTGGGAGAAATCAAGGAAAGCCGGAAGAAATTAGTGTGTAGTGTTTGCAAAGCGAAGTGTGGTGCTTGTATTCGCTGTAGCCATGGAAGCTGCAGAACTTCTTTTCATCCTTTATGTGCAAGAGAAGCTAGACATAGGATGGAGGTTTGGGCAAAGTATGGCAACGATAATGTTGAGTTGCGGGCTTTTTGCTTGAAACACTCAGATCTACCAGAGAACAGAAGCATCTTGCCATTGGAAGGCTCTGTTGTGGTTAGAAATGAATTTTCTGAAGCCAGTGGCCTTCCAGTGACATCGCCAGCATGTGGTGAACACAACTTGAAAGATTGCAGGAATGGAGGATTAGCCTTTGATAGTAGTCCAGACAAACTGAACCATAATGATGAACCGTCAGATGGAGGATTATTTGATTGCAGGTTAAGTGCTCACGACTTGTCGGGATGTGGTGCTGTGCCCCAGCAAAATGTTGAAGTGGTAGGGAGAGCCAATGACAATGTTGAGGCATCTGACTCTATTAGTTTTGCACTTGTTTTGAAGAAGTTAATTGATCGAGGAAAGGTTGATGTAAAAGACGTAGCATTGGAGATTGGAATTTCACCAGATACATTAACTGCAAATACCAATGAAGCATATATGGCCCCTGATGTCCGACACAAAATAATCAATTGGCTAAAAGCCCATGTATATACTAATGCATTTCAGAAGGGTTTAAAAGTTAAATTCAAACCAGCCAATGCATCCAAAAATGATACTGGAGCAACAGATGGTTCTGATACTTTACCGATATCAGATTCGGGTTTGCTGGATCCTGTTGCTGTTAAGTCAGTTCCGCCAAGGAGAAGAACCATTAGTAACATTAGGATTTTGAAGGATAATAAAGTGATATGTTCATCTGAGGGGGTTACTAGTGAAAATGGGATGCTGGTGGACACGTGCAGAGCAGGTCAGTCTGACTTTGACAATCCAACAAGTTCTAATGAAGCATCCATTCCCAATGCAACTGAAATGAACTTAACCAAGTCTGAGGATGTTTTTCATGAAGTTCAAGGCAATATTGTTAAACCTGACAAATCCTACTTGCCTGGATGCATTTCAGAAGACAAGTCAACTACTTGTTTGCAAAATGCTTCTATGCTTTCTGATCAGCACATTCTTCTTCATTCTGCTTCAGAACCACCTGATTCTGGTTTCATAAAGAGTGGTGCAATCTCTAATTACATTCATCCATTCATCAACAAGAAATTGCTGCAGATTCGTTCAAGCAACAAGGGAATTTCTTTGGTTGAATCCTCTGGGGCTAGTGGTTGCTCAAGTAGCCAAAATCAGAATGCAACTTGCATTGACATTTCAAAGCCCGATGAAGTAAATATGGAGCAGTTGGTCAGGGCTAGAAAAATGGGACTTTTAGAATATGCTCCCCAAGATGAATTAGAGGGGGAGCTTGTTTATTTTCAGTATAAATTATTGCAGAATGCAGTTACTAAAAAAAGGCATATTGATAACTTAATCTACAGTGTTGCCAAGAGTTTGCCACACGAGATTGATAAGGCACATCAACAAAGATGGGATGATGTTGTTGTTAATCAATATCTACGTGGTCTAAGAGAGGCGAAAAAGCAGGGCAGAAAAGAGAGAAAGCATAAGGAAGCACAGGCAGTGTTGGCTGCTGCAACTGCTGCTGCAGCAGCATCTTCTAGGGCTTTACGGAAAGACACTTTAGATGAATCTATGCAACAGGAGAATTTGTTAAAATTGGATAATCTAAATGGAAGGACTGGTGCTTGTTCTCAGCCAATGCCTCGAGCCAAAGAAACACTTTCTAGAGTAGCTGTGACAAGAACTTCATCAGAGAAATATTCAGATTTTTGCATACCAACCTCAGATTTTTCGAAGGAGCAATGTAAATCATGTGATATTTGCAGACGATCAGAGACTATATTAAACCCTATCCTAGTCTGCTCTGGTTGCAAGGTTTCAGTGCACTTGGATTGCTATCATAATGTGAAAGAAACAACAGGTCCATGGTACTGTGAGTTTTGTGAAGATTTGTCATCTAGAAGCTCTGGGGCATCTGCTGTCAGTTTCTGGGAGAAGCCGTATGTTGTTGCAGAATGTGCTCTCTGTGGTGGTACTACTGGTGCTTTTAGAAAGTCTTCTGATGGTCAATGGGTTCATGCCTTCTGTGCTGAGTGGGTTTTTGAGTCTACATTTAAAAGAGGACAAATAGGTGCCGTTGAAGGAATGGAAACTGTGCCAAAAGGAGTTGACATTTGTTGTATCTGCCACCGCAAACATGGTGTATGCATGAAGTGTTGCTATGGCCATTGTCAGACCACATTTCACCCACCCTGTGCTAGAAGTGCTGGTTTGTACATGAATGTGAGGACTGCTGGTGGCAAGGCTCAACACAAAGCTTACTGTGAAAAGCATAGTTTGGAGCAGAAGGGAAAGGCTGAAACTCAAAAGCATGGAATTGAAGAGTTAAAAAGTATCAGGAAAATCAGGGTTGAACTAGAGAGATTGCGTCTTCTTTGTGAAAGAATTGTCAAACGTGAAAAACTAAAGCGGGAATTGGTACTAAGTTCGCATAACATACTCGCCTTTAAAAGAGATCATGTTGCTAGGTCTGTGCTGGTTCATAGCCCTTTCATTCTTCCAGATGGTAGTTCAGAATCAGCTACAACATCCCTTAAAGGGAACACAGAGGGATACAGATCATGCAGTGAACCATTCCAAAGATCAGATGATGTTACTGTAGACAGTTCTGTTTCTGCTAAGCATCGTGTCAGAGTTGCCATATCTATGGACACAGACCCAAAATTGGATGATGACTGCTCAACCTCTCAAAGTCGATACAATCACAAGATTCCAGAGAGAACGCAATTTTCTGGCAAGAAGATTCCTCATAGAGCTGTTGCATCACGGAATATTTCAGATGAAGGTGGATGGAGATCTAAATCTAGAAAGCATGCTGAAACATTTGGAAAAGAGCTTGTTATGACGTCAGATGAAGCATCTATGAAGAATTCAAGGCTACCTAAAGGATATGCATATGTTCCTGCTGATTGCTTGTCAAATGACAAGCACTCTAACGAAGATGTATATGCTAGTGGACCAGCGGAACATGACAGAATGTTGCTTTCTGCTCTGGCGGGGGCAAGTTTTGTTAGCATTGTTGTATATTCCTTGAGAGTAAACTGTACAGTGGATGAGCATTTCTTGCATTTACTTGTATTAGAGGGGCATGCATTCCGTTTTATTGACACTCTTGTGAAGGACCAAACGGAAGCATTCCTTGTAATCATACAAGGGGAGATCAGGGAATCACCTGCTTTTCTTCGTAGTAATTCTGAAAGGGGTCTTGCTCGTCATCAGATCCACCGAGCATATAAATTATATTCAGCTTCTACCTCCTAA 4719 0.4253 SIGSEIEPECVIGIGFVAFSSLGLNLYDGMLCFLCTLLLPAMTGDRCHPWEGMADEEDAAAVGRPCQSDFPAESTCNSAAREIGYLSQARKALSERSPFDVAEETSTSATLTLPSELASLLNRHTDNRRRPKKSQSGGHKRKSSTRANQKKPEDSNIWIETEEYFRDLTVADIDILFEASCTSSLVSRDCFSIPFLGNAPRNNAVGINSEAELEPVSKLNIVSSVDDKGDLLSSEDGKKGCGTENEDVSLVIEAIDNVAVEQIHHQKDKNQDISDSSISLEWFLGCRNKVSLTSERPAKKRRLLGGEADLEKVIMTCPCDEGQPFCHYCGRGDAGRDSNRLIVCASCKMAVHLKCYGVKDDVDGAWLCSWCKQKGCADESVNPCVLCPKKGGALKPVNSSIEGAGSVPFVHLFCSLWMSEVYVDDLNKMEPVMNVGEIKESRKKLVCSVCKAKCGACIRCSHGSCRTSFHPLCAREARHRMEVWAKYGNDNVELRAFCLKHSDLPENRSILPLEGSVVVRNEFSEASGLPVTSPACGEHNLKDCRNGGLAFDSSPDKLNHNDEPSDGGLFDCRLSAHDLSGCGAVPQQNVEVVGRANDNVEASDSISFALVLKKLIDRGKVDVKDVALEIGISPDTLTANTNEAYMAPDVRHKIINWLKAHVYTNAFQKGLKVKFKPANASKNDTGATDGSDTLPISDSGLLDPVAVKSVPPRRRTISNIRILKDNKVICSSEGVTSENGMLVDTCRAGQSDFDNPTSSNEASIPNATEMNLTKSEDVFHEVQGNIVKPDKSYLPGCISEDKSTTCLQNASMLSDQHILLHSASEPPDSGFIKSGAISNYIHPFINKKLLQIRSSNKGISLVESSGASGCSSSQNQNATCIDISKPDEVNMEQLVRARKMGLLEYAPQDELEGELVYFQYKLLQNAVTKKRHIDNLIYSVAKSLPHEIDKAHQQRWDDVVVNQYLRGLREAKKQGRKERKHKEAQAVLAAATAAAAASSRALRKDTLDESMQQENLLKLDNLNGRTGACSQPMPRAKETLSRVAVTRTSSEKYSDFCIPTSDFSKEQCKSCDICRRSETILNPILVCSGCKVSVHLDCYHNVKETTGPWYCEFCEDLSSRSSGASAVSFWEKPYVVAECALCGGTTGAFRKSSDGQWVHAFCAEWVFESTFKRGQIGAVEGMETVPKGVDICCICHRKHGVCMKCCYGHCQTTFHPPCARSAGLYMNVRTAGGKAQHKAYCEKHSLEQKGKAETQKHGIEELKSIRKIRVELERLRLLCERIVKREKLKRELVLSSHNILAFKRDHVARSVLVHSPFILPDGSSESATTSLKGNTEGYRSCSEPFQRSDDVTVDSSVSAKHRVRVAISMDTDPKLDDDCSTSQSRYNHKIPERTQFSGKKIPHRAVASRNISDEGGWRSKSRKHAETFGKELVMTSDEASMKNSRLPKGYAYVPADCLSNDKHSNEDVYASGPAEHDRMLLSALAGASFVSIVVYSLRVNCTVDEHFLHLLVLEGHAFRFIDTLVKDQTEAFLVIIQGEIRESPAFLRSNSERGLARHQIHRAYKLYSASTS 1572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02916 1572 MobiDBLite consensus disorder prediction 120 155 - -
Pste2g02916 1572 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 315 379 IPR013083 -
Pste2g02916 1572 MobiDBLite consensus disorder prediction 1324 1343 - -
Pste2g02916 1572 Pfam PHD-finger 1082 1115 - -
Pste2g02916 1572 Pfam PHD-finger 339 372 - -
Pste2g02916 1572 SUPERFAMILY FYVE/PHD zinc finger 1061 1115 IPR011011 -
Pste2g02916 1572 SUPERFAMILY FYVE/PHD zinc finger 315 373 IPR011011 -
Pste2g02916 1572 ProSiteProfiles Extended PHD (ePHD) domain profile. 1136 1245 IPR034732 -
Pste2g02916 1572 ProSiteProfiles Zinc finger PHD-type profile. 323 374 IPR019787 -
Pste2g02916 1572 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1135 1246 IPR013083 -
Pste2g02916 1572 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 380 504 IPR013083 -
Pste2g02916 1572 MobiDBLite consensus disorder prediction 126 146 - -
Pste2g02916 1572 PANTHER PHD FINGER PROTEINS 130 1001 - -
Pste2g02916 1572 CDD ePHD 1139 1244 - -
Pste2g02916 1572 ProSiteProfiles Extended PHD (ePHD) domain profile. 381 502 IPR034732 -
Pste2g02916 1572 ProSiteProfiles Zinc finger PHD-type profile. 1068 1117 IPR019787 -
Pste2g02916 1572 SMART PHD_3 446 502 IPR001965 -
Pste2g02916 1572 SMART PHD_3 1191 1245 IPR001965 -
Pste2g02916 1572 SMART PHD_3 325 372 IPR001965 -
Pste2g02916 1572 SMART PHD_3 1070 1115 IPR001965 -
Pste2g02916 1572 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1008 1126 IPR013083 -
Pste2g02916 1572 Pfam PHD-zinc-finger like domain 1138 1244 - -
Pste2g02916 1572 Pfam PHD-zinc-finger like domain 383 501 - -
Pste2g02916 1572 Coils Coil 965 985 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02916 320 509 C2H2 Transcription Factor Family AT3G14740 30.570 1.26e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste2g02916 zf-HC5HC2H_2 4.1e-24 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02916 2 29153424 29169267 Pste2g02916 2 29153424 29169267 ECH