Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02906 AGAAGAAAACAAAAAATTCTTCAAAAAGAATGGTGGTTTGCTGTTGCAACAAAGAATGTCATCCGGAGAAGTTAATGTTGACAAAACTATTCTCTTCGGTTTAAAGGACTTGGAGAAAGCCGCTAACCACTTCAACACAAACAGAATTCTTGGAAAAGGAGGTCAAGGTACTGTTTACAAAGGCATGCTAGAAGATGGTAGAATTTTTGTAGTGAAAAAGTTTAAGGTGGAGGGAAATCTTGAAGAATTTGTCAACGAGTTTGTCATTCTTTCACAAATTAACAACAGAAATGTGGTCAATTTTTTAGGATGTTGTCTGGAAGTAGAAATTCCCTTACTTGTTTATGAATTCATTCCTAATGGTAACCTTTTCCAATATTTACATGACCACGATGAAGAAGTAGCAATGACCTGGGATATGCGTATGAGAATTGCTACAGAAATTGCAGGAGCATTATTCTACTTGCACTCGGTAGCATCTCAACCCATTTATCACAGAGACATCAAGTCCACGAATATACTATTGGATGAAAAGTATAGAGCAAAAATTGCAGACTTTGGAGCATCCAGAATAATTTCCATTGAAGCTACTCATCTTACCACAGTCGTGCAAGAAAAAAGTGAGGTATTCAGTTCTGGGGTAGTTCTTGCTGAACTTTTAACCGGAGAAAAACCAATATTCTTTGAAAGATCTTCAGATCCCAAGTGTTTAGCTTCATATTATGTTGAGTGTATGGAGGATGATAATTTGTTTGACATTATTGACGCGAGAGTTATGAAAGAAGCAGAGAAGGGGCAAATCATTGCAGTTGCTAATCTTGCAAATAAATGCTTAGAGTTGAATGGAAGAAAACGTCCAACTATGAAAGAAGTTACGTTTGAATTAGAAAGGATTCAAAGATTGGATAAGCAACCTAATGATGAAGAAAACCATGAAGAAATAGAGCTTTCCAGAATTGAAGATCACCAACCTTGGGCTGGATATTCTTCATCAAATTCTTTTCCAACTCTAAGCAGTGAAACAATCTCATCACACTCAACGGAGTGCGTGAACGTCAAAATCTACTCTTTGAATTTGACCAGGCTCTTGAAAATTAGGAGGAAGAAAATGGTTCTGAAACTAGTTGATATCATAATTTTGATGATATTGAACATACATCCATTAGCATGTGCAGAATATCAGAATGAGGGTATAGCGCAAGCCGGTTGTAAATGGGAATGTGGAAACGTTTCTATTCCTTACCCTTTCGGAATGCACGATCCCAAATGCTATGGAAGCAAGGCTTTTGAAATAGAATGCAGACATGAGAAAGACGTACCATATCTCAAGTACATAAATTTGGAAGTAATATTGATTGATATTGTGAAGGGTGTGGTTTGGATAAAGAATCCGATTTATCGTGAAGCCACGTTCCCATACGAGTACAATTATAGCTACTGGGTTCCCACTCTTGGGCACCTTCAGGATTTCAATGATGCTCCTGCGGCCCTTGAGTGGGAGATTCCCATTCACAGTACTCTCAACTATTCATTCAATGCTCCCAGCAACTGCATTCAGACTAATCTTACGTCTCAACAGGGTTGGAGATGTCTATGCAAACCTGGCTTCCAGGGTAATCCCTATATTCAAGGTGGCTGTCAAGCTAAGCCGGTTAACTCTTCAGACAATGAAAGAAAAAATCGACCAAACTGGGCCATAATAGGAGTTTCTTCAAGCCTTGGAACCATAATTGTATTGCTTAGTTTGTGGTGGTTGCATAAAGTTATAAGGAAAAAGATAGAAAAAAAGCGTAAAGAAAAGTTCTTCAAAAAAAATGGAGGATTGTTGTTAGAACAAAGACTATATTCTGGCGAAGTTAATGTTGACAAAATAAAACTCTTCAGTTTAAAGGACTTAGAGAAAGCCACAAATCACTTTAATATAAATAGAATACTCGGAAAGGGAGGTCAAGGTACTGTTTACAAAGGCATGCTAATAGATGGAAATATTGTTGCAGTGAAAAAGTTTAAGGTCAAAGGAAATGTGGACGAGTTCATCAATGAATTTGTAATTCTTTCACAAATTAACCATCGAAATGTGGTTAAGTTGCTGGGATGTTGTTTGGAGACTGAAATTCCTATGCTTGTTTATGAATTCATTCCTAATGGTAATCTTTTTGAGTATTTACATGGACAAAATGATGACTTACCAATGACATGGGAAGTACGTTTGAGAATTGCCAATGAAGTTGCTGGAGCTCTATTTTACTTACACTCAGCTATTTCTCAACCTATTTATCATAGAGACATCAAGTCAACAAATATATTATTGGATGGAAAGTATAAGGCAAAAGTAGCTGACTTTGGTGCTTCTAGAATGGTTTCTAGTGAAGCTACTCACTTAACCACTGCAGTTCAAGGAACTTTTGGTTACTTGGACCCTGAATATTTCCATACTAGTCAATTTACAGAAAAGAGTGATGTTTATAGTTTTGGAGTAGTTCTTGTTGAACTTTTAACTCGACAAAAGCCAATAAGATCTGGAGAACAAGAATTTAAAAGTTTGGCTTCATATTTTGTTCTGTGTGTGGAGGAAAATCGTTTATTTGAAATTGTTGATGAAACAATCGTGAATGAACATGAAAAAGATCACATCATTGTCGTTGCCAATCTTGCAAGAAAATGTTTGGCCTTGGATGGAAAAAAACGACCAACCATGAAAGAAGTCACATTTGAATTGGAAAGTATCCAAAAATTGGAAAAAAAAGCAAAAGAACACCGTGAAGAACTTGATTTTGTTAGAATAGAAGAGGACCAATTCTGGGGTGCATCTTATACAACTTCAATATCATGGGATACTTCAGACACTAAAACATCAACCGAGGAGATTATGCCTATTATTACCAAA 2887 0.3651 MSSGEVNVDKTILFGLKDLEKAANHFNTNRILGKGGQGTVYKGMLEDGRIFVVKKFKVEGNLEEFVNEFVILSQINNRNVVNFLGCCLEVEIPLLVYEFIPNGNLFQYLHDHDEEVAMTWDMRMRIATEIAGALFYLHSVASQPIYHRDIKSTNILLDEKYRAKIADFGASRIISIEATHLTTVVQEKSEVFSSGVVLAELLTGEKPIFFERSSDPKCLASYYVECMEDDNLFDIIDARVMKEAEKGQIIAVANLANKCLELNGRKRPTMKEVTFELERIQRLDKQPNDEENHEEIELSRIEDHQPWAGYSSSNSFPTLSSETISSHSTECVNVKIYSLNLTRLLKIRRKKMVLKLVDIIILMILNIHPLACAEYQNEGIAQAGCKWECGNVSIPYPFGMHDPKCYGSKAFEIECRHEKDVPYLKYINLEVILIDIVKGVVWIKNPIYREATFPYEYNYSYWVPTLGHLQDFNDAPAALEWEIPIHSTLNYSFNAPSNCIQTNLTSQQGWRCLCKPGFQGNPYIQGGCQAKPVNSSDNERKNRPNWAIIGVSSSLGTIIVLLSLWWLHKVIRKKIEKKRKEKFFKKNGGLLLEQRLYSGEVNVDKIKLFSLKDLEKATNHFNINRILGKGGQGTVYKGMLIDGNIVAVKKFKVKGNVDEFINEFVILSQINHRNVVKLLGCCLETEIPMLVYEFIPNGNLFEYLHGQNDDLPMTWEVRLRIANEVAGALFYLHSAISQPIYHRDIKSTNILLDGKYKAKVADFGASRMVSSEATHLTTAVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLVELLTRQKPIRSGEQEFKSLASYFVLCVEENRLFEIVDETIVNEHEKDHIIVVANLARKCLALDGKKRPTMKEVTFELESIQKLEKKAKEHREELDFVRIEEDQFWGASYTTSISWDTSDTKTSTEEIMPIITK 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02906 944 ProSiteProfiles Protein kinase domain profile. 621 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02906 944 Gene3D Transferase(Phosphotransferase) domain 1 100 305 - -
Pste2g02906 944 Gene3D Transferase(Phosphotransferase) domain 1 695 915 - -
Pste2g02906 944 FunFam Wall-associated receptor kinase 2 591 694 - -
Pste2g02906 944 SMART serkin_6 26 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02906 944 SMART serkin_6 621 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02906 944 ProSiteProfiles Protein kinase domain profile. 26 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02906 944 Gene3D Phosphorylase Kinase; domain 1 593 694 - -
Pste2g02906 944 FunFam Wall-associated receptor kinase 2 695 909 - -
Pste2g02906 944 Gene3D Phosphorylase Kinase; domain 1 2 99 - -
Pste2g02906 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pste2g02906 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 740 752 IPR008271 GO:0004672|GO:0006468
Pste2g02906 944 SUPERFAMILY Protein kinase-like (PK-like) 602 888 IPR011009 -
Pste2g02906 944 CDD STKc_IRAK 627 891 - -
Pste2g02906 944 Pfam Protein kinase domain 27 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02906 944 Pfam Protein kinase domain 622 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02906 944 SUPERFAMILY Protein kinase-like (PK-like) 11 278 IPR011009 -
Pste2g02906 944 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 380 897 IPR045274 GO:0007166
Pste2g02906 944 Coils Coil 884 911 - -
Pste2g02906 944 Pfam Wall-associated receptor kinase galacturonan-binding 385 444 IPR025287 GO:0030247
Pste2g02906 944 FunFam Wall-associated receptor kinase 2 100 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02906 Pste-Chr2 29076651 29090779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02906 503 944 Receptor kinase-like Gene Family AT1G79680 50.104 5.64e-145 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pste2g02906 Pkinase 4.5e-47 CL0016